Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20circinatum_20[genbank_20GCA_5F000876485.1_202015-02-17] 909 sequences; 42,540,497 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq59 206 3e-48 seq279 113 5e-20 seq168 91.5 2e-13 >seq59 Length=53314 Score = 206 bits (228), Expect = 3e-48 Identities = 1137/1781 (64%), Gaps = 51/1781 (3%) Strand=Plus/Minus Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270 ||| ||| ||||| ||||||| || | | || ||| || || || || || || Sbjct 45944 CCCTCAGCACATGATCATGCGTGTGTCTGTTGGTATCTGGGGTGATGATATCGAGCGAGT 45885 Query 75271 CTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTC 75328 ||||||||||||| | |||||| |||| | | ||| || || | || || ||| Sbjct 45884 CTTGGAGACATACAATCTGATGTCTAGCAAGTTCT--TCACGCATGCTTCCCCCACTCTC 45827 Query 75329 TTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 75388 |||||||| || || || || || |||| ||||||| | | | | ||||| Sbjct 45826 TTCAATGCCGGCACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTTGATATGAAGGAC 45767 Query 75389 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 75448 ||| || | || ||||| | ||||| | | ||||| ||||| ||| |||| Sbjct 45766 GACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGGCT 45707 Query 75449 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-A 75506 || ||||| || | | | || | | | || | | ||| || ||| || | Sbjct 45706 GGTGGTATCGGTCTAAATGTGCACCGTATTCGTGCTACTGG--CTCATACATCGCCGGTA 45649 Query 75507 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 75566 | || ||| ||| ||||| || |||| |||||||| || || ||| ||| || || | Sbjct 45648 CCAACGGTACATCGAATGGTGTTGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCGGT 45589 Query 75567 ATGTAAATCAAGCGGGGCGTC--GCAAGG-GGTCCATC-GCGGTCTACTTGGAACCATGG 75622 |||| | || | | ||| | || | ||| | | || ||||| | || || ||| Sbjct 45588 ATGTCGACCAGG-GTGGCAACAAGCGACCAGGTGCTTTTGCCATCTACCTCGAGCCTTGG 45530 Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682 || | ||| || | || |||||||| | || ||||| ||| | || |||| || | Sbjct 45529 CACTCTGATGTCTTCGATTTCCTTGATCTCCGTAAGAACCATGGTAAGGAGGAGG-TCCG 45471 Query 75683 TGTA-GAGATCTCTTTTCAT-CCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGG 75740 || | ||||| ||| | | |||| ||||| || || |||||||||||||| ||||| Sbjct 45470 TGCCCGTGATCT-TTTCCTTGCCCTTTGGATCCCTGATCTTTTCATGAAGCGTGTTGAAA 45412 Query 75741 AGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGAC-GCGGTG 75799 || ||| | ||| | || | || || || || || || ||| ||||| || || Sbjct 45411 AGAACGGTGACTGGACACTGATGTGCCCCAACGAGTGCCCTGGCCTCGCCGACTGCTATG 45352 Query 75800 GGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGC---CAATGCG 75856 | ||||| || || || || ||| ||||| || ||||||| | | ||| | Sbjct 45351 GA-GAGGAATTCGAGGCTCTGTACGAAAAGTTCGAGAAGGAGGGCAAGGGTCGCAA---G 45296 Query 75857 ACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAAC 75915 || | | || | | || | ||||| | || ||||| | | ||||| ||||| |||| Sbjct 45295 ACAAT-CAAGGCTCAGAAGCTTTGGTACGCCATTCTTGAGGCCCAGACTGAGACCGGAAA 45237 Query 75916 ACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAAC 75975 |||| ||||| ||||||||||| || ||| ||||| ||||||||||| | || || Sbjct 45236 CCCATTCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAAAAGAACCTCGGTAC 45177 Query 75976 AATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGC 76035 ||| ||||| || |||||||| |||||| | |||||| | | || ||| || Sbjct 45176 CATCCGAAGCTCCAACCTTTGCACTGAAATTATCGAGTACTGTGCTCCTGACGAGGTCGC 45117 Query 76036 TGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCA---ATGAAGAGACTCGCAC 76092 ||| ||||| | || || | | || || | ||| | || || || || Sbjct 45116 TGTCTGCAACCTTGCCTCTCTGTCTCTGCCCTCCTTCATCAACTACGATGAAGCTTGC-- 45059 Query 76093 TTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGT 76152 | || | | || || || | ||| || |||||| || || ||| | Sbjct 45058 -TACGACTTCAAGAAGCTGCACAAGGTCAGTCAGGTTGTTATTCGCAACCTGAACAAGAT 45000 Query 76153 CATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACC 76212 ||| || || || || || || || || || ||| ||||| ||| |||| Sbjct 44999 CATCGATGTGAACCACTACCCTGTCCAGGAGGCTCGCAACAGTAACATGCGCCACCGACC 44940 Query 76213 TATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATT-TTGTGCCGCTACGCATTTG 76271 ||||||| | ||||||||||| || || |||| || || | ||| | | | || | Sbjct 44939 TATTGGTCTTGGTGTTCAAGGCCTTGCCGATGCTTTCCTTGCTCTGCGTATGC-CCTTCG 44881 Query 76272 ATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCC 76331 | ||| || || ||| | || | ||||| || ||||| |||||||| ||| Sbjct 44880 AGTCACCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGACCATTTATCACGCTGCCC 44821 Query 76332 TGGAGGCGAGTTGTG-AATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCT 76390 | || ||| | ||||| | | | ||| |||| || || |||||||| Sbjct 44820 TCACTGC-CTCCGTGCAGCTGGCTAAGGAGGAGGGTCCCTACTCCACCTTCAAGGGTTCT 44762 Query 76391 CCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAA-ACCAAGCTCAACTA 76449 ||||| || | || | || |||||||| |||| |||| || || || | | || Sbjct 44761 CCCGCATCTGAGGGTATCCTCCAGTTTGACATGT-GGAACGTCAAGCCCTCGGACCTCTG 44703 Query 76450 CGACTGGGA---TGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTT 76506 || ||||| | ||| ||||| ||||| | || | ||||||||||| | Sbjct 44702 GGATTGGGAGACTCTTCGAGAGGAA---GTCAAGACACACGGCATCCGTAACAGTCTGCT 44646 Query 76507 GATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGA 76566 | || || ||||| || ||| ||| | || || |||| || || || ||||| || Sbjct 44645 CCTTGCTCCTATGCCTACTGCCAGTACCTCCCAGATTCTGGGCAACAACGAGTGCTTCGA 44586 Query 76567 ACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAA 76626 || ||||| | || ||||||| | | ||||| |||||||| ||||||| Sbjct 44585 GCCCTACACCTCCAATATCTACCAACGCCGTGTTCTCGCTGGTGAGTTCCAGGTTGTCAA 44526 Query 76627 CAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCT 76686 | || |||| ||||| | || ||||| |||||| | | ||||||| | | Sbjct 44525 CCCCTGGCTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAAGAACCG 44466 Query 76687 CATGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGAA 76746 ||| | | | |||||||||||| || || | | ||||| | || ||||| Sbjct 44465 CATCATTGCTGAGAATGGTTCCATTCAGAACATTCCCAACATCCCTGCCGACGTCAAGGC 44406 Query 76747 TCTCTACCGCACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGCAGATCG 76806 ||| ||| || || ||||| ||| | | ||| || | ||||| || ||||| Sbjct 44405 TCTGTACAAGACTGTCTGGGAGATCTCTCAGCGCCAGGTCGTTCAGATGGCTGCGGATCG 44346 Query 76807 TGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAGTCCAACGATG 76864 ||| |||||||||| |||| ||| |||| | |||| | || |||||| Sbjct 44345 AGGTGCATTCATTGATC--AGTCCCAGTCACTGAACATCCACATGAAGGACCCCACGATG 44288 Query 76865 TCCAAGCTCTCTTCTATGCA-TATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATGTA 76923 |||| || | |||||| | | | || ||||| | || ||||| ||||| ||||| Sbjct 44287 GGCAAGATCACCAGTATGCACTTCGCAGGC-TGGAAGCTTGGCCTCAAGACCGGCATGTA 44229 Query 76924 CTATCTCCGATCAAAGGCGAAAGCCCGACCAATTCAGTTCA 76964 ||| || || || |||| || || |||||||||| Sbjct 44228 CTACCTTCGTACACAGGCTGCTGCTGCTCCTATTCAGTTCA 44188 >seq279 Length=355525 Score = 113 bits (124), Expect = 5e-20 Identities = 330/503 (66%), Gaps = 18/503 (4%) Strand=Plus/Plus Query 65023 AAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAAAGTCTCGCTCCTTCGCCGAGCG 65081 |||||||| | ||||| || |||| | | | || | ||| |||||| ||| |||| Sbjct 82772 AAGAAGGCTGACTGGGCCATCCGATGGATCCAGGATAAGGACTC-CTCCTTTGCCCAGCG 82830 Query 65082 CCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTA 65141 || |||| ||||| ||| ||||||||||||||| || | ||| | | || | Sbjct 82831 TCTCGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGCCTTCGCCTCCATCTT 82890 Query 65142 TTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCG 65201 ||| | |||||||| ||||||||||| || || ||||| || || || || || || Sbjct 82891 CTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACTTTCTCCAACGAGCTCATCTCTCG 82950 Query 65202 AGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTTTGCGTAA---TAG 65258 || |||||||| ||| || |||||| || ||| || | || | || | | Sbjct 82951 TGACGAGGGTCTTCACACTGACTTTGCC-TG--CCTCCTCCACTCTCACCTCAAGGGTCG 83007 Query 65259 ACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATTGAGAAAGGGTT 65318 ||| | | | ||||| | ||| | | || || || |||||| | | ||| Sbjct 83008 TGCCAGCAAGCAGATGATCCAGGATATCATCACTGATGCCGTCACCATTGAGCAGGAGTT 83067 Query 65319 CATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGATGTCCGAGTA 65378 || || || || || ||| ||| |||| ||||||||||| ||| | || Sbjct 83068 TCTCACCGAAGCTCTTCCCTGTGCCCTCCTCGGCATGAACTCTGACCTCATGAAGCAATA 83127 Query 65379 CATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGTGCCACCCA-----TTTGG 65433 |||||||| || | ||||||||||| |||| || | | | | Sbjct 83128 CATTGAGTTCGTCGCTGATCGTCTCCTTGTCGCTCTTGG-----CAACGAGAAGGTCTAC 83182 Query 65434 AACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTC 65493 || || | || || || ||||| ||||| ||||| ||||| ||| |||||||||||| Sbjct 83183 AAGGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGTGGCAAGACCAACTTC 83242 Query 65494 TTTGAGAAGCGAGTTGGGGACTA 65516 || |||||||| |||| ||||| Sbjct 83243 TTCGAGAAGCGTGTTGCCGACTA 83265 >seq168 Length=443820 Score = 91.5 bits (100), Expect = 2e-13 Identities = 124/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 27858 GCGCTCAAGGACAAGTTGTGCGATGCGATCCCCTTTCTTTACCTCAAAGTCTTTGTCTCC 27917 |||||| || |||||||| || ||||| || |||| ||| ||||||||||| || Sbjct 169994 GCGCTCTAGAACAAGTTGAGCAATGCGGTCGCCTTCCTTCACCTCAAAGTCGGATTCGTT 169935 Query 27918 GTGATTGAAGAGAACGACTTTGACTTCACCTGTATAGTCGGGATCAATAACACCCGCACC 27977 || |||||||| | ||| ||||||| ||| || |||| ||| || ||||| || || Sbjct 169934 ATGGTTGAAGAGCAGGACCTTGACTTGACCACGGTAATCGGCATCGATGACACCAGCGCC 169875 Query 27978 AACTTGAATACCATGCTTCACAGCGAGACCGGATCGTGGTGCAACACGACCAT 28030 | ||| |||||| ||| ||||| ||||| || |||| || |||| Sbjct 169874 TGTGTCAATGAAATGCTTGGAAGCCAGACCTGATCGAGGGGCAATGCGTCCAT 169822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596562821477920