Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20circinatum_20[genbank_20GCA_5F000876485.1_202015-02-17] 909 sequences; 42,540,497 total letters Query= NC_021530.1 Length=171407 Score E Sequences producing significant alignments: (Bits) Value seq645 93.3 5e-14 >seq645 Length=205223 Score = 93.3 bits (102), Expect = 5e-14 Identities = 139/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 158735 TGTGAAGAGGATCAATACATTCTAGACGCAGCAGAAGAAGCAGGAGTTGATATTAATTAC 158794 || || || ||| |||||| || |||||||| || ||| || | || | ||| Sbjct 157748 TGCGACGATGATACATACATCCTCGACGCAGCTGAGGAAAACGGCATAGACTTGCCTTAT 157807 Query 158795 TCTTGTCGTGCTGGTGCTTGCTCTTCATGTGCAGGTAAAATTGTATCTGGAACTGTTGAT 158854 ||||| || || || ||||||||||| ||| |||| ||| | ||||| ||||| || ||| Sbjct 157808 TCTTGCCGGGCAGGGGCTTGCTCTTCTTGTACAGGCAAACTCGTATCGGGAACAGTCGAT 157867 Query 158855 CAGAGTGATCAGTCGTTCTTAGACGATGATCAGATTGCAGCAGGATTTGTTCTTAC-GTG 158913 || || ||||| || ||||| || | ||||| | ||||| | || |||||| || Sbjct 157868 CAAAGCGATCAAAGCTTTTTAGATGACGGGCAGATAGAGGCAGGGTATG-TCTTACTCTG 157926 Query 158914 TGTAGCATATCCAAC 158928 ||| || || || || Sbjct 157927 TGTCGCTTACCCGAC 157941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548368169095880