Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20circinatum_20[genbank_20GCA_5F000876485.1_202015-02-17] 909 sequences; 42,540,497 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq623 113 3e-19 seq778 104 2e-16 >seq623 Length=206012 Score = 113 bits (124), Expect = 3e-19 Identities = 199/290 (69%), Gaps = 0/290 (0%) Strand=Plus/Minus Query 282182 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 282241 || ||||| || || || || ||||| ||||| | ||| | || | |||| | || Sbjct 88040 ACCAGACGGTTGTCGAAGTCCTCACCACCCAAGTGAGTGTCACCGGCGGTAGACTTGACC 87981 Query 282242 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCA 282301 | ||| | || || |||| | | |||| ||||| ||| |||||||| | ||| Sbjct 87980 TCGAAGATACCCTCCTCAATGGTGAGGAGAGACACATCGAAGGTACCACCACCAAGATCG 87921 Query 282302 AAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCA 282361 || || || || || || || || ||||||||||| || |||| || ||| Sbjct 87920 AAGATCAGGACGTTACGCTCGCCCTCGACCTTCTTATCAAGACCGTAGGCAATGGCGGCA 87861 Query 282362 GCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTA 282421 ||||| || || || || |||| | ||| |||||||| || || || ||||| || Sbjct 87860 GCAGTAGGCTCGTTGATGATTCGAAGAACGTTAAGACCGGCGATGAGACCAGCATCCTTG 87801 Query 282422 GTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 282471 |||||||| | || |||||||| || || ||||| ||||||| ||| || Sbjct 87800 GTGGCTTGACGCTGAGAATCGTTGAAGTAGGCAGGGACAGTAACAACAGC 87751 >seq778 Length=709472 Score = 104 bits (114), Expect = 2e-16 Identities = 96/122 (79%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 432288 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGT 432347 ||||| || |||||| || |||| || |||||||| ||||||||||| | || |||||| Sbjct 659850 GGTAAGGAGGGTCGTCTTCGAGGTAACTTGATGGGTAAGCGTGTCGACTTTTCGGCACGT 659909 Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCATTATT 432407 || || |||||| |||| | || || |||| | || ||||||||||||| || |||| Sbjct 659910 ACTGTCATTACTGGTGATGCCAACCTTTCTCTACACGAGGTTGGTGTTCCTCGCAGTATT 659969 Query 432408 GC 432409 || Sbjct 659970 GC 659971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740585771941434