Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20circinatum_20[genbank_20GCA_5F000876485.1_202015-02-17] 909 sequences; 42,540,497 total letters Query= NC_026926.1 Length=192108 Score E Sequences producing significant alignments: (Bits) Value seq645 91.5 2e-13 >seq645 Length=205223 Score = 91.5 bits (100), Expect = 2e-13 Identities = 164/237 (69%), Gaps = 2/237 (1%) Strand=Plus/Plus Query 179456 CCTTCCCATGTGAGGATGATCAGTATATCCTTGACGCTGCTGAAGAAGCAGGTGTAGATA 179515 ||||| || || |||||| || ||||| ||||| ||||| ||| || |||| Sbjct 157740 CCTTCAGCTGCGACGATGATACATACATCCTCGACGCAGCTGAGGAAAACGGCATAGACT 157799 Query 179516 TCAATTACTCTTGTCGTGCTGGTGCTTGTTCATCTTGTGCTGGTAAATTAGAGAGTGGAT 179575 | ||| ||||| || || || ||||| || |||||| | || ||| | | ||| Sbjct 157800 TGCCTTATTCTTGCCGGGCAGGGGCTTGCTCTTCTTGTACAGGCAAACTCGTATCGGGAA 157859 Query 179576 CTGTTGATCAAAGCGATCAATCGTTTTTGGATGACGATCAAATGGAGTCGGGATTTATTC 179635 | || ||||||||||||||| ||||| ||||||| || || ||| | || | | || Sbjct 157860 CAGTCGATCAAAGCGATCAAAGCTTTTTAGATGACGGGCAGATAGAGGCAGGGTAT-GTC 157918 Query 179636 TGACT-TGCGTATCTTATCCTACTAGTGATTGCGTAGTCTTGACTGAACAGGAAGAG 179691 | ||| || || |||| || ||||| || ||||| | || | | ||||||||| Sbjct 157919 TTACTCTGTGTCGCTTACCCGACTAGCGACTGCGTTATAAAGAGTCATCAGGAAGAG 157975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 614610616407520