Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20circinatum_20[genbank_20GCA_5F000876485.1_202015-02-17] 909 sequences; 42,540,497 total letters Query= NC_027132.1 Length=190768 Score E Sequences producing significant alignments: (Bits) Value seq645 86.0 8e-12 >seq645 Length=205223 Score = 86.0 bits (94), Expect = 8e-12 Identities = 171/251 (68%), Gaps = 2/251 (1%) Strand=Plus/Plus Query 177367 CCTTCCCTTGTGAAGACGATCAGTACATCCTCGACGCCGCTGAAGAAGCAGGTGTTGATA 177426 ||||| || || || ||| |||||||||||||| ||||| ||| || | || Sbjct 157740 CCTTCAGCTGCGACGATGATACATACATCCTCGACGCAGCTGAGGAAAACGGCATAGACT 157799 Query 177427 TTAATTACTCATGCCGCGCTGGTGCTTGTTCATCCTGTGCTGGTAAACTTGAGAGTGGTA 177486 | ||| || ||||| || || ||||| || || ||| | || ||||| | || | Sbjct 157800 TGCCTTATTCTTGCCGGGCAGGGGCTTGCTCTTCTTGTACAGGCAAACTCGTATCGGGAA 157859 Query 177487 GTGTAGATCAAAGCGATCAATCGTTCTTGGATGACGATCAAATGGAGTCAGGATTTATTC 177546 || ||||||||||||||| || || ||||||| || || ||| |||| | | || Sbjct 157860 CAGTCGATCAAAGCGATCAAAGCTTTTTAGATGACGGGCAGATAGAGGCAGGGTAT-GTC 157918 Query 177547 TGAC-CTGTGTGTCATATCCCACCAGCGATTGTGTAGTCTTGACCGATCAGGAAGAGAGT 177605 | || |||||| | || || || ||||| || || | || ||||||||||| | Sbjct 157919 TTACTCTGTGTCGCTTACCCGACTAGCGACTGCGTTATAAAGAGTCATCAGGAAGAGGAT 157978 Query 177606 CTTTACTGATG 177616 | |||| ||| Sbjct 157979 TTGTACTAATG 157989 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 610322665129920