Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20circinatum_20[genbank_20GCA_5F000876485.1_202015-02-17]
909 sequences; 42,540,497 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq59 201 1e-46
seq279 159 4e-34
seq135 86.0 8e-12
>seq59
Length=53314
Score = 201 bits (222), Expect = 1e-46
Identities = 1167/1846 (63%), Gaps = 51/1846 (3%)
Strand=Plus/Plus
Query 117805 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 117864
|||||||||| || || |||| || || ||||||||||| || |||||||| |
Sbjct 44188 TGAACTGAATAGGAGCAGCAGCAGCCTGTGTACGAAGGTAGTACATGCCGGTCTTGAGGC 44247
Query 117865 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATGA 117924
| |||||||| | | ||||| || | |||| | || || | ||||
Sbjct 44248 CAAGCTTCCAGCCTGCGAAGTGCATACTGGTGATCTTGCCCATCGTGGGGTCCTTCATGT 44307
Query 117925 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCA 117984
|| ||||| ||||| ||||| ||||| || |||||||| ||||| | || |
Sbjct 44308 GGATGTTCAGTGACTGGGACTGATCAATGAATGCACCTCGATCCGCAGCCATCTGAACGA 44367
Query 117985 CATCCTTCATCTTGATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATAT 118044
| | | ||| ||||| |||||| |||| || ||| | || | ||||| |
Sbjct 44368 CCTGGCGCTGAGAGATCTCCCAGACAGTCTTGTACAGAGCCTTGACGTCGGCAGGGATGT 44427
Query 118045 CCACGATATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACC 118104
|| || || ||||| ||| | | | ||| | | ||||||| | | ||||
Sbjct 44428 TGGGAATGTTCTGAATGGAACCATTCTCAGCAATGATGCGGTTCTTCATAGCATCGGACC 44487
Query 118105 AGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCACCCG 118164
| ||||| || | || |||| | || |||||||| |||||||| |
Sbjct 44488 ACAGACCCATGTCGACAAGGTCCTTGAGCAGCCAGGGGTTGACAACCTGGAACTCACCAG 44547
Query 118165 CGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCA 118224
|||| || | | |||||||||| ||||| ||||| |||||||| ||||| ||||
Sbjct 44548 CGAGAACACGGCGTTGGTAGATATTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCCA 44607
Query 118225 AGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCT 118284
|| |||| || ||| || ||||| || || | ||| || |||||||||| || |
Sbjct 44608 GAATCTGGGAGGTACTGGCAGTAGGCATAGGAGCAAGGAGCAGACTGTTACGGATGCCGT 44667
Query 118285 TTTCCCTAATGCGTTC-CTTGA-GAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTG 118342
| | | | | | | || || ||| ||||| || || | | | || | |
Sbjct 44668 GTGTCTTGA--CTTCCTCTCGAAGAGTCTCCCAATCCCAGAGGTCCGAGGGCTTGACGTT 44725
Query 118343 CCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGG 118402
|||||| ||||||||||||||||| | || || || || |||| || || || ||
Sbjct 44726 CCACATGTCAAACTGGAGGATACCCTCAGATGCGGGAGAACCCTTGAAGGTGGAGTAGGG 44785
Query 118403 GCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTC 118459
||||| ||| |||| | ||||| || |||||| |||||||| || || ||
Sbjct 44786 ACCCTCCTCCTTAGCCAGCTGCACGGAG---GCAGTGAGGGCAGCGTGATAAATGGTCTC 44842
Query 118460 AAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAA-AA 118518
|| || | || | | |||||| || || || | | || || | ||
Sbjct 44843 GAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGTGACTCGAAGGGCATACG-CAGAGCAA 44901
Query 118519 TAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACT 118578
|| |||| || || ||||| ||||| || ||||| || || || | ||| ||| |
Sbjct 44902 GGAAAGCATCGGCAAGGCCTTGAACACCAAGACCAATAGGTCGGTGGCGCATGTTACTGT 44961
Query 118579 TCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGA 118638
| ||||| || || || || ||| |||||| | | | || || || | |
Sbjct 44962 TGCGAGCCTCCTGGACAGGGTAGTGGTTCACATCGATGATCTTGTTCAGGTTGCGAATAA 45021
Query 118639 CAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTG-ACA 118697
|||||| ||| | || ||||| | | | || | || || |||||| | |
Sbjct 45022 CAACCTGACTGACCTTGTGCAGCTTCTTGAAGTCGTA---GCAAG---CTTCATCGTAGT 45075
Query 118698 TACTTAGGAAGGGCG-----ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAG 118752
| | | | ||||| | || || || || || |||| | ||| || | ||
Sbjct 45076 TGATGAAGGAGGGCAGAGACAGAGAGGCAAGGTTGCAGACAGCGACCTCGTCAGGAGCAC 45135
Query 118753 TGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGAT 118812
|||||| |||||||| ||||| | ||| || || ||||| || | ||||||||| |
Sbjct 45136 AGTACTCGATAATTTCAGTGCAAAGGTTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGT 45195
Query 118813 TTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGG 118872
| ||| ||| || ||||||||||| |||||| |||| | || ||||| || ||||
Sbjct 45196 TGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGG 45255
Query 118873 ACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGG---CTCGCCCC 118928
|| ||||| || | ||| | | || | || | | || | | | || | |||
Sbjct 45256 CCTCAAGAATGGCGTACCAAAGCTTCTGAGCCTTG---ATTGTCTTGCGACCCTTG-CCC 45311
Query 118929 TCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCT 118988
|| | |||| ||||| ||| || || || || || || || | || | ||| ||
Sbjct 45312 TCCTTCTCGAACTTTTCGTACAGAGCCTCGAATTCCTCTCCATAGCAGTCGGCGAGGCCA 45371
Query 118989 GGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAG 119048
|| || | ||||| | || | ||| | ||| || ||||| |||||||||||
Sbjct 45372 GGGCACTCGTTGGGGCACATCAGTGTCCAGTCACCGTTCTTTTCAACACGCTTCATGAAA 45431
Query 119049 AGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGA 119108
|| || |||||||| || || ||| ||||| || || | || || | || ||
Sbjct 45432 AGATCAGGGATCCAAAGGGCAAGGAAAAGATCACGGGCACGGACCTCCTCCTTACCATGG 45491
Query 119109 TTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCG 119168
|| ||| | || | || || | || ||| | |||||| || || ||||| | ||
Sbjct 45492 TTCTTACGGAGATCAAGGAAATCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCA 45551
Query 119169 ATTGACCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAAT 119222
| | | ||| | || ||| |||||| ||||||| |||||| ||| ||
Sbjct 45552 AAAG-CACCT--GGTCGCTTGTTGCCACCCTGGTCGACATACCGAGCAGTGTTGTTGAAG 45608
Query 119223 ACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGT-CCCCCGA-ATACGAGACT 119280
||||||||||| |||| | ||||| ||| || || || || ||| || ||| |
Sbjct 45609 ACACGAAGCATAGGAACAACACCATTCGATGTACCGTTGGTACCGGCGATGTATGAGCC- 45667
Query 119281 TATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCG 119340
| | || | | | ||| | | | ||| ||||| || ||| ||| ||||| |
Sbjct 45668 -AGTAGCACGAATACGGTGCACATTTAGACCGATACCACCAGCCATCTTGGAGATCATGG 45726
Query 119341 CGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGA 119400
| || | ||||| | ||||||| || || || ||| |||| | | | | ||
Sbjct 45727 CACAGGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCATATCAACCAAGA 45786
Query 119401 AGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGA 119460
|||| |||| ||| ||| || || || || ||||||||||| || | || ||
Sbjct 45787 AGCAAGATGACAATTGGGGCTGAGGGGTGCCGGCATTGAAGAGAGTGGGGGAAGCATGCG 45846
Query 119461 TGAACATACCTTG--GGACATCTTGTCGTAGGTCTCCAAGAC-GGCGGGAATGTCTTCCC 119517
||| | | |||| |||||| | ||| ||||||||||| || | || || || |
Sbjct 45847 TGA--AGAACTTGCTAGACATCAGATTGTATGTCTCCAAGACTCGCTCG-ATATCATCAC 45903
Query 119518 CGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCAT 119577
| ||||| | || || ||||| | ||||| || || || || | |||| |
Sbjct 45904 CCCAGATACCAACAGACACACGCATGATCATGTGCTGAGGGCGCTCGATAATCTTACCGT 45963
Query 119578 CGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATA 119623
| | | | ||||||| |||||| ||||||| ||||| ||
Sbjct 45964 CAATCTTGAGGAGGTATGATCGCTCCAAAGTCTTGAAGCCAAAGTA 46009
>seq279
Length=355525
Score = 159 bits (176), Expect = 4e-34
Identities = 311/454 (69%), Gaps = 8/454 (2%)
Strand=Plus/Minus
Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787
||||| |||| ||||||||||||||||| ||||| || | | | ||| ||||||||
Sbjct 83265 TAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATGTTCTCCATG 83206
Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAAT-TGCTGGCACTCCAATCTGTTTGAGGAGACG 129846
|| || || ||||| | | || | | | || | |||| ||||||||
Sbjct 83205 AAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTG-CCAAGAGCGACAAGGAGACG 83147
Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906
||| | |||| |||||||||| | ||| || |||||||| |||| |||| |||
Sbjct 83146 ATCAGCGACGAACTCAATGTATTGCTTCATGAGGTCAGAGTTCATGCCGAGGAGGGCACA 83087
Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966
|| || || || || ||| ||| ||||||| || || || | ||| | ||
Sbjct 83086 GGGAAGAGCTTCGGTGAGAAACTCCTGCTCAATGGTGACGGCATCAGTGATGATATCCTG 83027
Query 129967 AATGGTCTCCGTGC---CAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTC 130023
|| ||| | ||| || | | ||| | || | || ||| || |||||| ||
Sbjct 83026 GATCATCTGCTTGCTGGCACGACCCTTGAGGTGAGAGTGGAGGAGG--CA-GGCAAAGTC 82970
Query 130024 CTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAG 130083
||| |||||||||||||| |||||||| || || ||||| |||||| ||||||||
Sbjct 82969 AGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTCAGACCAGGCATGAG 82910
Query 130084 ACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCAC 130143
||| |||||||| | |||||| || | || | ||| ||||||||| ||||| ||
Sbjct 82909 ACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCACTGAAGAAGATACCCTCAAC 82850
Query 130144 ACACGCGAACGCAAAGAGACGCTCAGCAAAGGAG 130177
| || || |||| |||||||| |||||||||
Sbjct 82849 AGCAGCAAAGGCAACGAGACGCTGGGCAAAGGAG 82816
>seq135
Length=460123
Score = 86.0 bits (94), Expect = 8e-12
Identities = 91/120 (76%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 180879 CAACTTGGCACCGTAGCCATTGCGTCCACCAACAATTCTCTTCTTGTTGTCATCGTAGTT 180938
|| |||||||||||| || ||||| |||||||| || |||||| || ||| ||| ||||
Sbjct 242309 CAGCTTGGCACCGTAACCGTTGCGACCACCAACGGTTTTCTTCTCGTCGTCGTCGAAGTT 242368
Query 180939 TGTACTCGTGAGGAGGTGACCAAAGGTAAGTTCTGGATTCCAAATATCCTCCTTTTCGTG 180998
| || || | || || |||||| |||| || ||| | | || | ||||||||||||
Sbjct 242369 GGAACCCGCCAACAGATGTCCAAAGATAAGCTCGGGAATGTAGATCTTCTCCTTTTCGTG 242428
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618428173030040
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