Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20cuneirostrum_20[genbank_20GCA_5F001680505.1_202016-07-06]
18,692 sequences; 49,007,756 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq1098 120 3e-22
>seq1098
Length=11580
Score = 120 bits (132), Expect = 3e-22
Identities = 369/565 (65%), Gaps = 13/565 (2%)
Strand=Plus/Minus
Query 16961 AGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTC 17020
|| ||||| || ||| || | |||||||| | ||| || ||||| ||||| |||
Sbjct 10021 AGGCATGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTC 9962
Query 17021 AACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAG 17080
| || ||||| || || ||||| | ||| || || | ||| || | || |||
Sbjct 9961 AGGCCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAG 9902
Query 17081 AATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTA 17140
|| ||||||||||||| ||||| |||| | || | || | | || || ||||
Sbjct 9901 AAGATACCCTCGACGGCAGCAAAGGCGACGAGACGCTGAGCAAAGGACGAGTTCTTGTCC 9842
Query 17141 CGAATCCATTTCTGCACCCACTCGGCTTT-TTGCTTTATGCAATCCATCGTTTCTATGGC 17199
| |||||| |||| ||||| || |||| ||||| || || || |||||
Sbjct 9841 TGGATCCATCGGATGGCCCAGTCGGCCTTCTTGCGG-ATGCAGGGGATGGTCTCAATGGC 9783
Query 17200 CTTAAATAATTTCTCTTTTTCCTGTAGG-TCGATTATATACGTATCGATGAGTAGGCTGT 17258
|| || | | | || | ||| || | || || || || ||||| || ||
Sbjct 9782 GTTGAAGAGGTAGGTTCGTTGA-GCAGGCTCCTTGATGTAGGTGTCAATGAGGAGCGAGT 9724
Query 17259 ACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCG 17318
| | |||||||| ||||||||||| ||||| || ||||| ||||||||||| || |
Sbjct 9723 AGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGGGCCTCGG 9664
Query 17319 CTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCG 17378
|| || || || || |||||| || | || || ||||| ||||||||||| |
Sbjct 9663 GGATCTGGACCTCGCCGCTGAATCGCTCGACAAGGTTCTCGTTGACGATGCCGTCAGAGG 9604
Query 17379 CGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAACGCG-- 17436
| ||||| || || | || || | ||| | | ||||| | || || |||
Sbjct 9603 CAGCGAAGAAGGCGAGGATGTGGGAGACGAAGAACTGCTCGTCGGCAGTCAG---GCGGT 9547
Query 17437 ----CCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCA 17492
|||||| | | ||| ||||||| ||| | || |||| ||||| ||| |||
Sbjct 9546 TGTTCCAGTCGTGGAGATCCTTGGATAGATCAATCTCCTCGGCAGTCCAGAAAGAGGCCT 9487
Query 17493 CTGCCTTTTTATACATATTCCAAAT 17517
| ||||| || ||||| | ||| ||
Sbjct 9486 CGGCCTTCTTGTACATCTGCCAGAT 9462
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517424675470560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |