Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20cuneirostrum_20[genbank_20GCA_5F001680505.1_202016-07-06] 18,692 sequences; 49,007,756 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq398 132 1e-25 seq2080 96.9 7e-15 seq1659 95.1 3e-14 >seq398 Length=19136 Score = 132 bits (146), Expect = 1e-25 Identities = 412/630 (65%), Gaps = 17/630 (3%) Strand=Plus/Plus Query 248818 TACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAG 248877 ||| | | ||||| ||||| || || ||| ||| || |||||||| |||||||||||| Sbjct 13609 TACCAGTACTTTGGCTTCAAGACTCTTGAGCGATCCTACCTCCTCAAGATTGATGGCAAG 13668 Query 248878 ATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGAC 248937 || || || || ||||||||| | ||||| ||| ||||||| || | || |||| Sbjct 13669 ATTGTTGAGCGTCCCCAGCACATGATCATGCGTGTGTCTGTCGGCAT---CTGGGGTGAC 13725 Query 248938 -ATAGAGAGCGTG--CTCGAGACGTACACCGGAATG-AGTGAACGCTGGATGACACATGC 248993 ||| ||||||| || ||||| |||| | ||| | | | | | | || ||||| Sbjct 13726 GATATTGAGCGTGTCCTGGAGACCTACAACCTCATGTCGAGCAAG-TTCTTCACCCATGC 13784 Query 248994 CACACCGACGCTCTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCT 249053 | | || || |||||||| || ||||| | | ||||||| ||| ||||| || | Sbjct 13785 CTCCCCCACCCTCTTCAATGCTGGTACTCCCCAGCCTCAGCTGTCCTCATGCTTCCTGGT 13844 Query 249054 TGCCATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGAC---GGCGAA 249110 | ||| |||| ||| | || || |||||||| || || | |||| || | Sbjct 13845 CGATATGAAAGAGGACAGCATTGAGGGTATTTATGATACTCTCA---AGACCTGTGCCAT 13901 Query 249111 GATTTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTC 249170 ||| || || | ||||| || ||||| || |||| | ||||| || | || || Sbjct 13902 GATCTCCAAGATGGCGGGTGGTATCGGCCTGAACGTCCACCGAATCCGTGCCACTGGCTC 13961 Query 249171 GTACATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGA 249230 |||||| ||||| || || | | ||| || ||| | ||||| ||| | Sbjct 13962 TTACATCGCTGGTACCAACGGTACCTCCAACGGTGTCACTCCCATGCTTCGTGTCTTCAA 14021 Query 249231 GTCCACCGCCAGGTTCATCAACCAGGCCGGGCGC---CGAAAGGGGTCGTTCGCCATGTA 249287 ||| ||| ||| | || |||||| || | ||| || | || ||||| || Sbjct 14022 CAACACTGCCCGGTACGTCGACCAGGGTGGCAACAAGCGACCTGGTGCCTTTGCCATCTA 14081 Query 249288 TTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAA 249347 | || |||||||| ||| | || |||||||| ||| || |||||| ||||||| Sbjct 14082 CCTTGAGCCCTGGCACGCAGATGTCTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAA 14141 Query 249348 CGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCG 249407 ||| | | || || ||||| ||| | || ||| | |||| | |||||| Sbjct 14142 GGAGGAGGTCCGCGCCCGCGACCTGTTCCTGGCTCTCTGGATTCCCGATCTCTTCATGAA 14201 Query 249408 CCGCGTCAAGGCCGACGGCGATTGGACGCT 249437 || ||| || |||| || ||||| || Sbjct 14202 GCGTGTCGAGAAGAACGGTGACTGGACCCT 14231 >seq2080 Length=9039 Score = 96.9 bits (106), Expect = 7e-15 Identities = 122/168 (73%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 254000 CCTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGC 254059 ||| || ||| | || || |||| ||||| || || ||||||||||| |||||||| || Sbjct 2270 CCTCCCCCATCTCCTCCTCTACGGCCCTCCAGGCACCGGCAAGACGTCGACCATCCTCGC 2329 Query 254060 GCTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGC 254119 || ||||| | | | ||| | |||||| | || ||||||||||| ||||| Sbjct 2330 CCTCGCCCGCCGCATCTATGGCACCGCAAACATGCGCCAGATGGTGCTCGAGCTCAACGC 2389 Query 254120 TTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTT 254167 || ||||| ||||| | ||||| || || || |||||||||| || Sbjct 2390 CTCGGACGACCGCGGCATCGACGTGGTGCGGGAGCAGATCAAGACGTT 2437 >seq1659 Length=7967 Score = 95.1 bits (104), Expect = 3e-14 Identities = 133/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 254202 TGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAG 254261 || || ||||||||| || | || || |||||||| ||| ||||||| || || ||| Sbjct 4722 TGCCCCCCTTTCAAGATCATCATTCTCGACGAGGCCGACTCCATGACACAAGATGCCCAG 4781 Query 254262 TCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGC 254321 ||| || || |||| |||||||| || | | || || || ||| || | ||| Sbjct 4782 AGCGCACTGCGAAGAACAATGGAGACATACAGCAAGATCACTCGCTTCTGCTTGATCTGC 4841 Query 254322 AACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCAGC 254381 ||||| || | ||||||| |||||| ||| ||| ||| |||||||||||||| Sbjct 4842 AACTATGTCACCCGAATCATCGACCCGCTCGCTAGTCGATGCAGCAAGTTTCGATTCAAG 4901 Query 254382 ACCCTCG 254388 | ||||| Sbjct 4902 AGCCTCG 4908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073509242342656