Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20cuneirostrum_20[genbank_20GCA_5F001680505.1_202016-07-06]
18,692 sequences; 49,007,756 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq398 132 1e-25
seq2080 96.9 7e-15
seq1659 95.1 3e-14
>seq398
Length=19136
Score = 132 bits (146), Expect = 1e-25
Identities = 412/630 (65%), Gaps = 17/630 (3%)
Strand=Plus/Plus
Query 248818 TACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAG 248877
||| | | ||||| ||||| || || ||| ||| || |||||||| ||||||||||||
Sbjct 13609 TACCAGTACTTTGGCTTCAAGACTCTTGAGCGATCCTACCTCCTCAAGATTGATGGCAAG 13668
Query 248878 ATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGAC 248937
|| || || || ||||||||| | ||||| ||| ||||||| || | || ||||
Sbjct 13669 ATTGTTGAGCGTCCCCAGCACATGATCATGCGTGTGTCTGTCGGCAT---CTGGGGTGAC 13725
Query 248938 -ATAGAGAGCGTG--CTCGAGACGTACACCGGAATG-AGTGAACGCTGGATGACACATGC 248993
||| ||||||| || ||||| |||| | ||| | | | | | | || |||||
Sbjct 13726 GATATTGAGCGTGTCCTGGAGACCTACAACCTCATGTCGAGCAAG-TTCTTCACCCATGC 13784
Query 248994 CACACCGACGCTCTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCT 249053
| | || || |||||||| || ||||| | | ||||||| ||| ||||| || |
Sbjct 13785 CTCCCCCACCCTCTTCAATGCTGGTACTCCCCAGCCTCAGCTGTCCTCATGCTTCCTGGT 13844
Query 249054 TGCCATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGAC---GGCGAA 249110
| ||| |||| ||| | || || |||||||| || || | |||| || |
Sbjct 13845 CGATATGAAAGAGGACAGCATTGAGGGTATTTATGATACTCTCA---AGACCTGTGCCAT 13901
Query 249111 GATTTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTC 249170
||| || || | ||||| || ||||| || |||| | ||||| || | || ||
Sbjct 13902 GATCTCCAAGATGGCGGGTGGTATCGGCCTGAACGTCCACCGAATCCGTGCCACTGGCTC 13961
Query 249171 GTACATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGA 249230
|||||| ||||| || || | | ||| || ||| | ||||| ||| |
Sbjct 13962 TTACATCGCTGGTACCAACGGTACCTCCAACGGTGTCACTCCCATGCTTCGTGTCTTCAA 14021
Query 249231 GTCCACCGCCAGGTTCATCAACCAGGCCGGGCGC---CGAAAGGGGTCGTTCGCCATGTA 249287
||| ||| ||| | || |||||| || | ||| || | || ||||| ||
Sbjct 14022 CAACACTGCCCGGTACGTCGACCAGGGTGGCAACAAGCGACCTGGTGCCTTTGCCATCTA 14081
Query 249288 TTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAA 249347
| || |||||||| ||| | || |||||||| ||| || |||||| |||||||
Sbjct 14082 CCTTGAGCCCTGGCACGCAGATGTCTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAA 14141
Query 249348 CGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCG 249407
||| | | || || ||||| ||| | || ||| | |||| | ||||||
Sbjct 14142 GGAGGAGGTCCGCGCCCGCGACCTGTTCCTGGCTCTCTGGATTCCCGATCTCTTCATGAA 14201
Query 249408 CCGCGTCAAGGCCGACGGCGATTGGACGCT 249437
|| ||| || |||| || ||||| ||
Sbjct 14202 GCGTGTCGAGAAGAACGGTGACTGGACCCT 14231
>seq2080
Length=9039
Score = 96.9 bits (106), Expect = 7e-15
Identities = 122/168 (73%), Gaps = 0/168 (0%)
Strand=Plus/Plus
Query 254000 CCTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGC 254059
||| || ||| | || || |||| ||||| || || ||||||||||| |||||||| ||
Sbjct 2270 CCTCCCCCATCTCCTCCTCTACGGCCCTCCAGGCACCGGCAAGACGTCGACCATCCTCGC 2329
Query 254060 GCTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGC 254119
|| ||||| | | | ||| | |||||| | || ||||||||||| |||||
Sbjct 2330 CCTCGCCCGCCGCATCTATGGCACCGCAAACATGCGCCAGATGGTGCTCGAGCTCAACGC 2389
Query 254120 TTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTT 254167
|| ||||| ||||| | ||||| || || || |||||||||| ||
Sbjct 2390 CTCGGACGACCGCGGCATCGACGTGGTGCGGGAGCAGATCAAGACGTT 2437
>seq1659
Length=7967
Score = 95.1 bits (104), Expect = 3e-14
Identities = 133/187 (71%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 254202 TGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAG 254261
|| || ||||||||| || | || || |||||||| ||| ||||||| || || |||
Sbjct 4722 TGCCCCCCTTTCAAGATCATCATTCTCGACGAGGCCGACTCCATGACACAAGATGCCCAG 4781
Query 254262 TCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGC 254321
||| || || |||| |||||||| || | | || || || ||| || | |||
Sbjct 4782 AGCGCACTGCGAAGAACAATGGAGACATACAGCAAGATCACTCGCTTCTGCTTGATCTGC 4841
Query 254322 AACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCAGC 254381
||||| || | ||||||| |||||| ||| ||| ||| ||||||||||||||
Sbjct 4842 AACTATGTCACCCGAATCATCGACCCGCTCGCTAGTCGATGCAGCAAGTTTCGATTCAAG 4901
Query 254382 ACCCTCG 254388
| |||||
Sbjct 4902 AGCCTCG 4908
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073509242342656
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |