Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20cuneirostrum_20[genbank_20GCA_5F001680505.1_202016-07-06] 18,692 sequences; 49,007,756 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq398 136 8e-27 seq1098 122 2e-22 >seq398 Length=19136 Score = 136 bits (150), Expect = 8e-27 Identities = 187/259 (72%), Gaps = 2/259 (1%) Strand=Plus/Minus Query 94785 GCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACC 94844 ||||| || || || |||||||||| || || ||| ||||||||||||||||| Sbjct 13929 GCCGATACCACCCGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAAATACC 13870 Query 94845 CTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGT 94904 ||||||||| || |||| | | | |||||||| ||||| || || || | || Sbjct 13869 CTCAATGCTGTCCTCTTTCATATCGACCAGGAAGCATGAGGACAGCTGAGGCTGGGGAGT 13810 Query 94905 TCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATA 94964 ||| ||| || || |||||||| |||||||| || | | ||||||||||| | || Sbjct 13809 ACCAGCATTGAAGAGGGTGGGGGAGGCATGGGTGAAGAACTTGCTCGACATGAGGTTGTA 13750 Query 94965 TGTTTCAATGACAGATTTGATGTC-TGATCCGTGAATGCCGACAGCCACACGCATAATCA 95023 || || | |||| | || || | | || | |||||||||| ||||||||| |||| Sbjct 13749 GGTCTCCAGGACACGCTCAATATCGTCACCCCAG-ATGCCGACAGACACACGCATGATCA 13691 Query 95024 TGTCCTGAGGGCGCTCAAC 95042 ||| ||| || |||||||| Sbjct 13690 TGTGCTGGGGACGCTCAAC 13672 >seq1098 Length=11580 Score = 122 bits (134), Expect = 2e-22 Identities = 115/147 (78%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 || ||||||||||| || || || |||||||| || ||||| || || ||||| |||||| Sbjct 9873 GTCGCCTTTGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGG 9932 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 ||||||| | || | ||||||| || |||| ||||| ||| |||| ||| | ||| Sbjct 9933 CTCAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTTTCCAACGAGCTCATCTCTCGTGAC 9992 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGC 102064 || |||||||| ||||||||||||| Sbjct 9993 GAGGGTCTTCACACCGACTTTGCATGC 10019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989347003290860