Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20cuneirostrum_20[genbank_20GCA_5F001680505.1_202016-07-06] 18,692 sequences; 49,007,756 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq1098 134 2e-26 >seq1098 Length=11580 Score = 134 bits (148), Expect = 2e-26 Identities = 368/558 (66%), Gaps = 8/558 (1%) Strand=Plus/Minus Query 42065 CATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGT 42124 ||||| || ||| ||| |||||||| || | | || | ||||||||||| || || Sbjct 10018 CATGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGG 9959 Query 42125 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAG 42184 || ||||| ||||||||||| || ||||| || || || ||||| | || |||||| Sbjct 9958 CCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAG 9899 Query 42185 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA--ACCGGCAC-TGTCATGT 42241 || || || || || |||||||| | || | || || | || | | |||| || Sbjct 9898 ATACCCTCGACGGCAGCAAAGGCGACGAGACGCTGAGCAAAGGACGAGTTCTTGTCCTGG 9839 Query 42242 ATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 42300 ||||| | || ||||| ||||||||||| | || || || || || ||||| || Sbjct 9838 ATCCATCGGATG-GCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTT 9780 Query 42301 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACAT 42360 ||||| ||| || || | | || || | || || || || | || || | Sbjct 9779 GAAGAGGTAGGTTCGTTGAGCAGGCTCCTTGATGTAGGTGTCAATGAGGAGCGAGTAGGT 9720 Query 42361 TTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAAC 42420 || || || ||||| || || ||||| || |||||||| |||| |||||||| | Sbjct 9719 CTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGGGCCTCGGGGAT 9660 Query 42421 CTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGC 42480 ||| || || | ||||| || | | || ||||| || || |||||| ||| || Sbjct 9659 CTGGACCTCGCCGCTGAATCGCTCGACAAGGTTCTCGTTGACGATGCCGTCAGAGGCAGC 9600 Query 42481 AAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTA---ATTTATTCCA 42537 || || || | | || | || | | ||||| | || | || ||||| Sbjct 9599 GAAGAAGGCGAGGATGTGGGAGACGAAGAACTGCTCGTCGGCAGTCAGGCGGTTGTTCCA 9540 Query 42538 ATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTT 42597 || | || ||| || |||| ||| | || || | ||||| || || || || ||||| Sbjct 9539 GTCGTGGAGATCCTTGGATAGATCAATCTCCTCGGCAGTCCAGAAAGAGGCCTCGGCCTT 9480 Query 42598 TTTATACATATTCCAGAT 42615 || ||||| | |||||| Sbjct 9479 CTTGTACATCTGCCAGAT 9462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 670982388325920