Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20cuneirostrum_20[genbank_20GCA_5F001680505.1_202016-07-06] 18,692 sequences; 49,007,756 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq499 105 6e-18 >seq499 Length=17199 Score = 105 bits (116), Expect = 6e-18 Identities = 127/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 5581 GCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCC 5640 ||||||| ||| ||||| || || ||||||||| ||| ||||| || ||| | | Sbjct 11856 GCGCTCGAGGATGAGCTGGGCGATGCGGTCGCCCTCCTTGACCTCAAAGTCGGACTCGTT 11915 Query 5641 GAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCC 5700 | |||||| || | || || | ||| | |||||||||||| || || || ||||| Sbjct 11916 GTGGTTGAAGAGGAGGACCTTGACCTGGCCTCTGTAGTCGGCGTCGATGACACCAGCGCC 11975 Query 5701 CACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGT 5753 | |||||||||||||||| || || ||||| ||||| || | |||||||| Sbjct 11976 CGTGTCGATGAAGTGCTTGGAGGCGAGACCGGATCGGGGGGCAATGCGGCCGT 12028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429956429844704