Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20cuneirostrum_20[genbank_20GCA_5F001680505.1_202016-07-06] 18,692 sequences; 49,007,756 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq398 399 6e-106 >seq398 Length=19136 Score = 399 bits (442), Expect = 6e-106 Identities = 1082/1632 (66%), Gaps = 38/1632 (2%) Strand=Plus/Plus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 ||||| || ||| | || || | | ||||||||| |||| | || ||| |||| || Sbjct 13774 TTCACCCATGCCTCCCCCACCCTCTTCAATGCTGGTACTCCCCAGCCTCAGCTGTCCTCA 13833 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 ||||| || | | ||||| || || ||| |||||||| | ||| || || |||| Sbjct 13834 TGCTTCCTGGTCGATATGAAAGAGGACAGCATTGAGGGTATTTATGATACTCTCAAGACC 13893 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC 363725 ||||| | || ||||||| || || || || || | | || ||||| | ||||| Sbjct 13894 TGTGCCATGATCTCCAAGATGGCGGGTGGTATCGGCCTGAACG-TCCACCGAATCCGTGC 13952 Query 363726 -ACAGAACAGTTACATTCGC-GGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTT 363783 || | | |||||| ||| || || || ||| || || | |||||||||| Sbjct 13953 CACTGG-CTCTTACAT-CGCTGGTACCAACGGTACCTCCAACGGTGTCACTCCCATGCTT 14010 Query 363784 CGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCG 363843 ||||| || |||| ||||| ||||||||||||||||||| ||||| || || Sbjct 14011 CGTGTCTTCAACAACACTGCCCGGTACGTCGACCAGGGTGGCAACAAGCGACCTGGTGCC 14070 Query 363844 TTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAA 363903 ||||| || || || ||||| || || ||| | |||||||| ||||| || || || Sbjct 14071 TTTGCCATCTACCTTGAGCCCTGGCACGCAGATGTCTTTGAGTTCCTTGACCTGCGCAAG 14130 Query 363904 AACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGAC 363963 ||| || || ||||| | || || || || |||||| || || ||| || | || Sbjct 14131 AACCACGGCAAGGAGGAGGTCCGCGCCCGCGACCTGTTCCTGGCTCTCTGGATTCCCGAT 14190 Query 363964 CATTTTATGAAGCGCGTGGAGGCAGGTAAGA--ATTGGTCACTCTTTTGCCCACACGAAT 364021 | || |||||||| || ||| | | | | | ||| | ||| | || || |||| | Sbjct 14191 CTCTTCATGAAGCGTGTCGAG--AAGAACGGTGACTGGACCCTCATGTGTCCCAACGAGT 14248 Query 364022 GTCCAGGTCTTTCCGA-TG-TATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGA 364079 | || ||||| |||| || ||||| | | || | | ||||| |||||||||||||| Sbjct 14249 GCCCCGGTCTGGCCGACTGCTATGGCGAG--GAGTTCGAGGCTCTTTACGAAAAGTATGA 14306 Query 364080 ATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGA 364139 || ||| |||| ||| ||||| || || |||||||| |||| ||||||| | || Sbjct 14307 GAAGGCGGGCAAGGGTCGCAAGACCATGAAGGCCCAGAAGCTCTGGTATGCCATCCTCGA 14366 Query 364140 TTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTC 364199 |||||| ||||| || | |||| ||| | ||||| || |||||||||||| Sbjct 14367 GGCGCAGACCGAGACCGGCAACCCCTTCATGCTCTACAAGGACCACTGCAACCGCAAGAG 14426 Query 364200 CAACCAGCAGCACCTTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAAT 364258 ||||||| || |||| || || | || | || ||| || || ||||||||||| || | Sbjct 14427 CAACCAGAAGAACCTGGGCACCA-TCCGTAGCTCCAATCTCTGCACCGAGATTATCGAGT 14485 Query 364259 ACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTG 364318 || ||| || || ||| ||| || || |||||||| || | || || || |||| Sbjct 14486 ACTGCGCCCCTGATGAGGTTGCTGTCTGCAACCTTGCTTCTCTGGCCCTGCCTTCGTTCA 14545 Query 364319 TAA---AAGATGGTACT---TTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTA 364372 | | | |||| | || | |||| |||| | | | ||||| || | || Sbjct 14546 TCAACTACGATGATGCTTGCTATGACTTCCAGAAGTTGCACGACGTCACACAGGTTGTCG 14605 Query 364373 CTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CG----A 364427 | |||| || ||| | |||||||| ||| | || || || | ||||| || | Sbjct 14606 TTCGCAACCTGAACAGGATTATCGACGTGAACCACTACCCTGTTACGGAAGCTCGCAACA 14665 Query 364428 GCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTT 364487 || || ||||| || || || |||||| ||||||| ||||| || ||||| | ||| Sbjct 14666 GC-----AACATGCGACACCGACCCATTGGTGTTGGTGTCCAGGGTCTTGCTGATGCTTT 14720 Query 364488 TATGATGCTC--AAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATC 364545 | ||||| ||| | || || || || || ||||||| || || ||| ||||| Sbjct 14721 CCT--TGCTCTGCGCATGCCTTTCGAGTCTCCCGAGGCTCGTGAGCTCAACAAGCAGATC 14778 Query 364546 TTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTG-ATTTGGCAAAAACCAAGGG 364604 || || || || || ||| || | ||||||||| ||| | |||| || |||| Sbjct 14779 TTCGAGACCATCTACCATGCTGCCCTCACTGCTTCG-GTGCAGCTGGCCAAGGAGGAGGG 14837 Query 364605 AAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATG 364664 ||||| || | |||| || || || |||| | ||||||| || | || Sbjct 14838 TCCCTACTCCACCTTCAAGGGCTCTCCCGCCTCTGAGGGTATTCTCCAGTTCGACATGTG 14897 Query 364665 GAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCA 364724 |||||| | ||| |||| || ||| ||||||| | || || | || ||| |||| Sbjct 14898 GAATGTGAAGCCTTCTGACCTCTGGGACTGGGAGAACCTCCGGGAGCAGGTCAAGGAGCA 14957 Query 364725 TGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCT 364784 || | ||||||| || | || || ||||| || || |||| | |||||||| Sbjct 14958 CGGCATTCGCAACAGTCTGCTGCTTGCCCCTATGCCTACTGCCAGTACTTCGCAGATCCT 15017 Query 364785 CGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTC 364844 || ||||||||||||||||| || | || ||| | || ||||| || || | Sbjct 15018 GGGCAACAACGAGTGCTTCGAGCCTTACACCTCCAACATCTACCAGCGCCGTGTCCTCGC 15077 Query 364845 CGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTG 364904 || || || | ||| || || | || ||||||| ||| ||| || ||||| Sbjct 15078 TGGCGAGTTCCAGGTCGTCAACCCCTGGCTGCTCAAGGACCTTGTTGACATGGGCCTGTG 15137 Query 364905 GGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGG 364964 | || |||||| ||| ||||| |||| || ||||| | |||||||| || Sbjct 15138 GTCGGATGCCATGAAAAACCGAATCATTGCCGAGAACGGTTCCATCCAGAACATCCCCAA 15197 Query 364965 ATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCT 365024 | || | || | ||| | | ||||| ||||| ||||| ||||| ||| | Sbjct 15198 CATCCCCGCCGAGGTCAAGGCCCTCTACAAGACCGTCTGGGAGATTTCGCAGCGCCAGGT 15257 Query 365025 CATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATT 365084 | || | ||||| ||||| || ||||| || || |||| |||||| | ||| | Sbjct 15258 CGTTCAGATGGCTGCCGACCGAGGTGCCTTCATTGATCAGTCCCAGTCCCTCAACATCCA 15317 Query 365085 CATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGG 365144 ||||| | || ||| | |||| | || |||||| || ||| ||||| ||| Sbjct 15318 CATGAAGGACCCCACCATGGGCAAGATCACCAGCATGCACTTTGCCGGCTGGAAGCTCGG 15377 Query 365145 TCTTAAGACAGG 365156 || ||||| || Sbjct 15378 CCTGAAGACGGG 15389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303041458217144