Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20cuneirostrum_20[genbank_20GCA_5F001680505.1_202016-07-06] 18,692 sequences; 49,007,756 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq398 183 3e-41 seq1492 116 3e-21 seq4643 113 4e-20 seq4729 98.7 9e-16 >seq398 Length=19136 Score = 183 bits (202), Expect = 3e-41 Identities = 826/1291 (64%), Gaps = 31/1291 (2%) Strand=Plus/Minus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||||||||| |||||||| || | ||||| ||| || | ||| || ||| | || Sbjct 15098 TTGACGACCTGGAACTCGCCAGCGAGGACACGGCGCTGGTAGATGTTGGAGGTGTAAGGC 15039 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || || ||||||| ||||||||||| || | || | || || ||||| || | | Sbjct 15038 TCGAAGCACTCGTTGTTGCCCAGGATCTGCGAAGTACTGGCAGTAGGCATAGGGGCAAGC 14979 Query 145178 A--ATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCC 145235 | | | || ||||| | |||||||| ||||| | ||| || | |||| |||| Sbjct 14978 AGCAGACTG--TTGCGAATGCCGTGCTCCTTGACCTGCTCCCGGAGGTTCTCCCAGTCCC 14921 Query 145236 ATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGC 145295 | || || ||| |||| | |||||||||| |||| | ||| ||||| |||||| Sbjct 14920 AGAGGTCAGAAGGCTTCACATTCCACATGTCGAACTGGAGAATACCCTCAGAGGCGGGAG 14861 Query 145296 TGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAAC-TCGCCTCCAGA 145354 ||| | |||| ||| ||| ||||| |||| ||| | || || Sbjct 14860 AGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCCAGCT-GCACCGAAGCAGTGAGG 14802 Query 145355 GCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCG 145414 || | || || |||||| || ||| |||||||| || || |||| Sbjct 14801 GCAGCATGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGAGACTCG 14742 Query 145415 TACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGC 145474 | ||||||||||| | |||||||| || || ||||| | || || || ||||| Sbjct 14741 AAAGGCATGCGCAGAGCAAGGAAAGCATCAGCAAGACCCTGGACACCAACACCAATGGGT 14682 Query 145475 CGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGATAATT 145534 || ||| ||||||||| | | || | | ||| || | || ||||||||| Sbjct 14681 CGGTGTCGCATGTTGCTGTTGCGAGCTTCCGTAACAGGGTAGTGGTTCACGTCGATAATC 14622 Query 145535 TTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACCGA 145594 | |||| ||| || || || |||| ||| | || ||||||| | |||||| | | | Sbjct 14621 CTGTTCAGGTTGCGAACGACAACCTGTGTGACGTCGTGCAACTTCTGGAAGTCATAGCAA 14562 Query 145595 GCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGCCGTC 145654 || || || | | | | | ||| | || || | || || || || | Sbjct 14561 GCATCATCGTAGTTGATGAACGAAGGCAGGGCCAGAGAAGCAAGGTTGCAGACAGCAACC 14502 Query 145655 TCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATT---GCTACATTTGATGGTT 145711 || || | | ||| ||| | | ||||||| ||| | ||| ||||| |||||| Sbjct 14501 TCATCAGGGGCGCAGTACTCGATAATCTCGGTGCAGAGATTGGAGCTAC---GGATGGTG 14445 Query 145712 CCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCG 145771 ||||| || | ||| || || || | |||||| |||||||||||||||| | || | Sbjct 14444 CCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGTTG 14385 Query 145772 CCAGTCTCCACCTGCGTCTCCACGAT---AAAACGGTGCAAGTCCTGCGCACGCACCTGC 145828 || ||||| ||||| ||| | ||| | | | | || | ||| || || || Sbjct 14384 CCGGTCTCGGTCTGCGCCTCGAGGATGGCATACCAGAGC---TTCTGGGCCTTCA--TGG 14330 Query 145829 TGCTGGTAGC--GGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCGT 145886 | || | | |||| | | || || || ||| || |||| ||| | || | Sbjct 14329 TCTTGCGACCCTTGCCCGCCTTCTCATACTTTTCGTAAAGAGCCTCGAACTCCTCGCCAT 14270 Query 145887 AGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGT 145946 |||| |||| ||| ||||| |||| |||||||||||| || | ||| | ||||| | Sbjct 14269 AGCAGTCGGCCAGACCGGGGCACTCGTTGGGACACATGAGGGTCCAGTCACCGTTCTTCT 14210 Query 145947 TGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTGC 146006 ||| |||| ||| || | ||| || | ||| || || | || |||||| || | Sbjct 14209 CGACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCCAGGAACAGGTCGCGGGCGCGGA 14150 Query 146007 AATCCTCAGCACCCATGTT-TCGCTTCAAATTAAGCACACT-ATAGATGTCCGCGTGCCA 146064 ||||| || ||| | || || | ||| | ||| | ||| || |||||||| Sbjct 14149 CCTCCTCCTTGCCGTGGTTCTTGC-GCAGGTCAAGGA-ACTCAAAGACATCTGCGTGCCA 14092 Query 146065 CGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCACGTGACG 146121 || |||| |||| ||| | ||| || ||| |||||||||||||| |||| || Sbjct 14091 GGGCTCAAGGTAGATGGCAAAGGCACCAGGTCGCTTGTTGCCACCCTGGTCGACGTACCG 14032 Query 146122 TACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCGTAGA 146181 | ||||||| ||||| || | |||||| ||| ||| ||| ||||| ||| Sbjct 14031 GGCAGTGTTGTTGAAGACACGAAGCATGGGAGTGACACCGTTGGAGGTACCGTTGGTACC 13972 Query 146182 GTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACC-GCCGCCGT 146240 || | ||| || || | | || || |||| ||||| ||| ||||| | Sbjct 13971 AGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGACGTTCAGGCCGATACCACCCGCCAT 13912 Query 146241 ACTTGGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATCGCTTC 146300 |||||| || ||| ||| ||| || || || || || |||||||| || | Sbjct 13911 -CTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAAATACCCTCAATGCTGTCCTCTT 13853 Query 146301 GAATGCCGAGCAGAAAGCACGAGCACATCTG 146331 || ||| ||| ||||| ||| ||| ||| Sbjct 13852 TCATATCGACCAGGAAGCATGAGGACAGCTG 13822 >seq1492 Length=9010 Score = 116 bits (128), Expect = 3e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | || || || | || | |||||||||||| || |||||||||||| Sbjct 4551 GCCACCACGAAGGCGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCGGA 4492 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| ||||| ||||||||||| ||| | || | ||||||||||| || || Sbjct 4491 GAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGGGG 4432 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| || ||| ||||| | || | ||||| | |||||||| Sbjct 4431 GATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTATCCGAGGACTCGAC 4372 Query 131187 GTCGACGGTAACGGTTTTACCGGT 131210 |||| ||||| ||| || || || Sbjct 4371 CTCGAGGGTAATGGTCTTGCCCGT 4348 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||||| ||| || || | || | ||||||||||| || |||||||| ||||| Sbjct 5053 CCACCGCGCAGACGAAGAACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTG 4994 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || |||||| ||||||||||| || |||| | ||||| || || ||||| Sbjct 4993 AGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGTCGCTGTTGATCAGGAGGA 4934 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| ||| || | | || | || |||| || || | Sbjct 4933 ATGCCTTCCTTGTCCTGGATCTTCGATTTCACATTGTCAATGGTGTCGGACGATTCCACC 4874 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || ||||| || || || ||||| |||||||| Sbjct 4873 TCAAGGGTGATGGTCTTTCCGGTGAGGGTCTTGACGAAGATCTGCAT 4827 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| || || | ||| | |||||||||||| || |||||||| ||| | Sbjct 5281 CCGCCACGGAGACGGAGAACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 5222 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||| || |||||||| || || |||| | ||||||||||| || ||| Sbjct 5221 AGGGTGCGACCGTCTTCCAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCAGGGGGG 5162 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||| | | || | |||||| | ||||| | Sbjct 5161 ATGCCCTCCTTGTCCTGAATCTTGGACTTCACGTTGTCAATGGTATCGCTCGACTCCACC 5102 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || || || ||||| || || || |||||||| Sbjct 5101 TCCAGAGTGATGGTCTTTCCAGTGAGAGTCTTGACAAAGATCTGCAT 5055 Score = 98.7 bits (108), Expect = 9e-16 Identities = 134/187 (72%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || |||||||| ||||||||||| ||| | |||||| ||||| ||||||||||| Sbjct 4795 GTTGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCAAGCTGCTTGCCG 4736 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 ||| | || | ||||||||||| ||||| || || || || || ||| ||| |||| Sbjct 4735 GCGAAAATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTATCTTGGATCTTCGACTTG 4676 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | || |||| ||||| | |||| ||| | || ||||| || || || Sbjct 4675 ACGTTGTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTACCAGTGAGGGTC 4616 Query 131218 TTTACGA 131224 || |||| Sbjct 4615 TTGACGA 4609 >seq4643 Length=2915 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| || || || | || | ||| |||||| || |||||||| |||||| Sbjct 900 CCACCACGCAGGCGGAGGACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 841 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| ||||||||||| || |||| | ||||||||||| || ||| Sbjct 840 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCGGGGGGG 781 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || |||| ||||| | Sbjct 780 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 721 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | || || || || || || || || || |||||||| Sbjct 720 TCGAGGGTGATTGTCTTCCCCGTGAGGGTCTTGACAAAGATCTGCAT 674 >seq4729 Length=2784 Score = 98.7 bits (108), Expect = 9e-16 Identities = 131/182 (72%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| || |||||||| ||| | ||| || ||||| ||||||||||| ||| ||| Sbjct 379 CCTTCTGGATGTTGTAGTCGGAAAGGGTTCGGCCATCCTCCAGCTGCTTGCCAGCGAAGA 320 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | |||||||||||||| ||||| || || ||||| ||| || ||||| | | Sbjct 319 TCAGTCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 260 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || || | |||||||| |||| ||| | ||| || || || || || || |||| Sbjct 259 CAATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 200 Query 131225 AA 131226 || Sbjct 199 AA 198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471902514209280