Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20cuneirostrum_20[genbank_20GCA_5F001680505.1_202016-07-06]
18,692 sequences; 49,007,756 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq398 504 1e-137
seq1098 399 4e-106
>seq398
Length=19136
Score = 504 bits (558), Expect = 1e-137
Identities = 1246/1870 (67%), Gaps = 53/1870 (3%)
Strand=Plus/Minus
Query 243737 ACGCTGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTG 243796
||| ||||||||| ||| || |||| |||| || | ||||||||||||||| |||||
Sbjct 15440 ACGGTGAACTGGATGGGAGCAGCGGCAGCCTGCGTTCGCAGGTAGTACATGCCCGTCTTC 15381
Query 243797 AGTCCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGG 243856
|| || |||| || | ||||||| || | ||| ||| || |
Sbjct 15380 AGGCCGAGCTTCCAGCCGGCAAAGTGCATGCTGGTGATCTTGCCCATGGTGGG------- 15328
Query 243857 TCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCT 243916
||||| || || ||||||||||||| ||| || | ||||| | || ||
Sbjct 15327 --GTCCTT---CATGTGGATGTTGAGGGACTGGGACTGATCAATGAAGGCACCTCGGTCG 15273
Query 243917 GCGGCCATGGTGATGAGGTCCTT---CTGAGATATCTCATACGCCGTCTTGTAGATGGGC 243973
|| ||||| ||| | | ||| ||| || ||||| | | |||||||||| || |
Sbjct 15272 GCAGCCATC-TGA--ACGACCTGGCGCTGCGAAATCTCCCAGACGGTCTTGTAGAGGGCC 15216
Query 243974 TTGAGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGG 244033
|||| | |||||| ||||||||| | || || || | | | |||| ||
Sbjct 15215 TTGACCTCGGCGGGGATGTTGGGGATGTTCTGGATGGAACCGTTCTCGGCAATGATTCGG 15156
Query 244034 GTGCGCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTGTTC 244093
| |||| ||| ||||||||||| | | || ||| || ||| |||
Sbjct 15155 TTTTTCATGGCATCCGACCACAGGCCCATGTCAACAAGGTCCTTGAGCAGCCAGGGGTTG 15096
Query 244094 ACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCG 244153
|| ||||| ||||| || | || || ||||||||||||| |||| | || ||||||
Sbjct 15095 ACGACCTGGAACTCGCCAGCGAGGACACGGCGCTGGTAGATGTTGGAGGTGTAAGGCTCG 15036
Query 244154 ATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGC 244213
| || ||| |||||||||| ||||||| || || ||||| ||||| || | | ||||
Sbjct 15035 AAGCACTCGTTGTTGCCCAGGATCTGCGAAGTACTGGCAGTAGGCATAGGGGCAAGCAGC 14976
Query 244214 AGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATG 244273
|||||||| | | ||||||| || || | | ||| | | ||||||||| | |
Sbjct 14975 AGACTGTTGCGAATGCCGTGCTCCTTGACCTGCTCCCGGAGGTTCTCCCAGTCCCAGAGG 14916
Query 244274 CCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACG 244333
| || ||| | || | || ||||||||| ||||| || | |||| | ||
Sbjct 14915 TCAGA-AGG-CTTCACATT-------CCACATGTCGAACTGGAGAATACCCTCAGAGGCG 14865
Query 244334 GGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTT-ACAGCTCTCGTC 244392
|| ||||| | |||| | ||||||||| || || |||||||| || | ||
Sbjct 14864 GGAGAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCCAGCTGCACCGAAGCAGT- 14806
Query 244393 GAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCA 244452
|||||| || | ||||||||||||||||||| |||||| | || || |||| | |
Sbjct 14805 GAGGGCAGCATGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGAGA 14746
Query 244453 GGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGAT 244512
||| || |||| || | ||| | || || || ||||| || || | || ||
Sbjct 14745 CTCGAAAGGCATGCGCAGAGCAAGGAAAGCATCAGCAAGACCCTGGACACCAACACCAAT 14686
Query 244513 GGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGAT 244572
||||| ||||||| ||||| | ||||| | || ||||| ||| |||||||
Sbjct 14685 GGGTCGGTGTCGCATGTTGCTGTTGCGAGCTTCCGTAACAGGGTAGTGGTTCACGTCGAT 14626
Query 244573 CACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTA 244632
| | |||| |||||||| || | | ||||||| || | ||| ||||| ||
Sbjct 14625 AATCCTGTTCAGGTTGCGAACGACAACCTGTGTGACGTCGTGCAACTTCTGGAAGTCATA 14566
Query 244633 CTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAG 244692
| | | ||| ||| | || ||| || || | ||||| | || ||
Sbjct 14565 ---GCAAGCATCATCGTAGTTGATGA-----ACGAAGGC----AGGGCCAGAGAAGCAAG 14518
Query 244693 GTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACT 244752
||||||||| || ||||| || | | | ||||| || ||||||||||||||| ||
Sbjct 14517 GTTGCAGACAGCAACCTCATCAGGGGCGCAGTACTCGATAATCTCGGTGCAGAGATTGGA 14458
Query 244753 GCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAG 244812
|| |||||||||||||| || || ||| |||| ||||||| ||||||||||||
Sbjct 14457 GCTACGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAG 14398
Query 244813 CATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGC 244872
||||||||| ||||||||| ||| || |||||| | | |||||| | | ||
Sbjct 14397 CATGAAGGGGTTGCCGGTCTCGGTCTGCGCCTCGAGGATGGCATACCAGAGCTTCTGGGC 14338
Query 244873 CTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTC 244932
||| | ||| ||||| |||||||| | ||| || ||| || |||||||||||
Sbjct 14337 CTTCATGGTCTTGCGACCCTTGCCCGCCTTCTCATACTTTTCGTAAAGAGCCTCGAACTC 14278
Query 244933 GGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGG-CACATGAGACTCCACTCGC 244991
||| || ||| | || ||||||||| || ||| |||||||| |||| || |
Sbjct 14277 CTCGCCATAGCAGTCGGCCAGACCGGGGCACT-CGTTGGGACACATGAGGGTCCAGTCAC 14219
Query 244992 CGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCC 245051
|| | || ||| | || ||||||||| ||||| |||||||| ||| |||| ||||| |
Sbjct 14218 CGTTCTTCTCGACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCCAGGAACAGGTCGC 14159
Query 245052 TGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGA 245111
|| | ||| ||| ||| |||||| | ||| || | || |||||||| ||
Sbjct 14158 GGGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCTG 14099
Query 245112 CGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCA 245171
||||||||||||| | ||||| || | ||| || || ||||||||||| |||||||| |
Sbjct 14098 CGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCAGGTCGCTTGTTGCCACCCTGGTCGA 14039
Query 245172 CCATCCTCTCGAGCG-CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCG 245230
| || | || | |||||||| || || | || | ||||| ||| |||
Sbjct 14038 CGTACCGGGC-AGTGTTGTTGAAGACACGAAGCATGGGAGTGACACCGTTGGAGGTACCG 13980
Query 245231 TTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGTCCG 245290
||||| || |||||| | ||| || | | || | || | || ||| | ||
Sbjct 13979 TTGGTACCAGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGACGTTCAGGCCGATACCA 13920
Query 245291 CCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTG 245350
|| || ||||||||| | ||| ||| |||||| || || || ||||| ||||||
Sbjct 13919 CCCGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAAATACCCTCAATGCTG 13860
Query 245351 TCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTG 245410
||| ||||| | || ||| ||||| ||||||||||| |||| ||| | | | |||
Sbjct 13859 TCCTCTTTCATATCGACCAGGAAGCATGAGGACAGCTGAGGCTGGGGAGTACCAGCATTG 13800
Query 245411 AACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACGTCTGGAGC 245470
|| || |||||| ||| ||||| ||| | |||||| | || ||| |||| ||
Sbjct 13799 AAGAGGGTGGGGGAGGCATGGGTGAAGAACTTGCTCGACATGAGGTTGTAGGTCTCCAGG 13740
Query 245471 AGAGCGTCGATGTTGTCGCCGTGGAT-CTGCAGGGCGCACCTCATGAGGGTGTGCTGGGG 245529
| | || || | ||| || ||| | | | | || | ||||| ||||||||||
Sbjct 13739 ACACGCTCAATATCGTCACCCCAGATGCCGACAGACACA-CGCATGATCATGTGCTGGGG 13681
Query 245530 -CG-TC-TCGATGGGTCCCTCGGGTCCCTTGAGCATGTAGGAGCGCTCGAGCGTCTTGAA 245586
|| || | || || || |||||| | |||||| ||||| || ||||||||
Sbjct 13680 ACGCTCAACAATCTTGCCATC---AATCTTGAGGAGGTAGGATCGCTCAAGAGTCTTGAA 13624
Query 245587 CCCAAAGTAC 245596
|||||||||
Sbjct 13623 GCCAAAGTAC 13614
>seq1098
Length=11580
Score = 399 bits (442), Expect = 4e-106
Identities = 615/860 (72%), Gaps = 28/860 (3%)
Strand=Plus/Plus
Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359
|||||| |||||||||||||| || ||| |||||| |||||||||||||| ||
Sbjct 9462 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAGGAGATTGATCTA 9521
Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCA-----CTGTCTGAGAACGAAAAGTTTTTCCTCA 42414
||||||| || |||| | || ||| ||| |||| |||| ||| ||
Sbjct 9522 TCCAAGGATCTCCACGACTGGAA--CAACCGCCTGACTGCCGACGAGCAGTTCTTCGTCT 9579
Query 42415 AAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCA 42474
|||| || ||||||||||| |||||||||||||| ||||| |||||||| | |
Sbjct 9580 CCCACATCCTCGCCTTCTTCGCTGCCTCTGACGGCATCGTCAACGAGAACCTTGTCGAGC 9639
Query 42475 GGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCA 42534
| |||| ||||| ||| | ||||| || |||||||||||||||||||| |
Sbjct 9640 GATTCAGCGGCGAGGTCCAGATCCCCGAGGCCCGATGCTTCTACGGCTTCCAGATCATGA 9699
Query 42535 TAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATC 42591
| |||||| | ||||| ||| ||| | || |||| |||| |||||| ||| |
Sbjct 9700 TGGAGAACATCCACTCCGAGACCTACTC---GCTCCTCATTGACACCTACATCAAGGAGC 9756
Query 42592 CCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGG 42651
| | | || | | || ||||| ||||| ||||| || ||||||||| |||||||
Sbjct 9757 CTGCTCAACGAACCTACCTCTTCAACGCCATTGAGACCATCCCCTGCATCCGCAAGAAGG 9816
Query 42652 CGGACTGGGCGCTCAACTGGATCGAGAGTCCCG-ACGCAACGTTCGGCGAGAGGCTGGTA 42710
| |||||||| || |||||| || | | | || | | || | || | || ||
Sbjct 9817 CCGACTGGGCCATCCGATGGATCCAG-GACAAGAACTCGTCCTTTGCTCAGCGTCTCGTC 9875
Query 42711 GCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTC 42770
|||||| | ||||||||||| ||||||||| || ||||| ||||||||||||||||||
Sbjct 9876 GCCTTTGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCTC 9935
Query 42771 AAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGA 42829
||| || || || ||||| || || ||||| || ||||| |||||| | |||||
Sbjct 9936 AAGAAGCGTGGCCTC-ATGCCTGGCCTGACCTTTTCCAACGAGCTCATCTCTCGTGACGA 9994
Query 42830 GGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTC-AGGCACAAGCCCT 42888
||| || || | |||||||| |||||||| ||| ||||||| ||| | |||
Sbjct 9995 GGGTCTTCACACCGACTTTGCATGCCTCCTCCACTC---CCACCTCAAGGGCCGTGCCAG 10051
Query 42889 CGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCA 42948
| ||| || ||| || ||||||||| || ||||| || ||| |||||||||| |
Sbjct 10052 C-AAGCAGGTCATCCAGGACATCATCACCGATGCCGTCACCATTGAGCAGGAGTTCCTGA 10110
Query 42949 CGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCC 43008
| || | || ||| ||||| ||||||||||| |||||||||| ||||||||
Sbjct 10111 CCGAGGCCCTCCCCTGCGCCCTGCTCGGCATGAACGCCGACCTCATGAAGCAGTACATCG 10170
Query 43009 AGTACGTCGCCGACCATCTCCT-GT-GCCAGATGGGTCTC-AGCCGCCTCTACAACACGC 43065
||| ||||||||||| ||||| || ||| | || | || | ||||||| |
Sbjct 10171 AGTTCGTCGCCGACCGCCTCCTCGTCGCC--CTCGGCAACGAGAAG-GTCTACAAGGCCA 10227
Query 43066 CGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGA 43125
| |||||||||||| |||||||||||||| | | |||||||||||||| |||||||
Sbjct 10228 CCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAACTTCTTCGAGA 10287
Query 43126 AGCGCGTCGCCGACTACCAG 43145
|||| |||| |||||||||
Sbjct 10288 AGCGTGTCGGTGACTACCAG 10307
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944118555145920
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