Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20cuneirostrum_20[genbank_20GCA_5F001680505.1_202016-07-06]
18,692 sequences; 49,007,756 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq1098 132 6e-26
>seq1098
Length=11580
Score = 132 bits (146), Expect = 6e-26
Identities = 529/822 (64%), Gaps = 33/822 (4%)
Strand=Plus/Minus
Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817
|||||| || || ||||||||||||||||| ||||| || | | | ||| ||||||||
Sbjct 10304 GTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTCCAT 10245
Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGCACCCCAATCTGTTTGAGG 125872
|| || || ||||| | | || | | | |||| || | ||||
Sbjct 10244 GAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTG-----CCGAGGGCGACGAGG 10190
Query 125873 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGG 125932
|| || || | |||| |||| ||||||| ||| || | |||||| |||| |||
Sbjct 10189 AGGCGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTCGGCGTTCATGCCGAGCAGG 10130
Query 125933 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATG 125992
|| ||||| || || | |||| ||| |||||| ||||| || | ||||
Sbjct 10129 GCGCAGGGGAGGGCCTCGGTCAGGAACTCCTGCTCAATGGTGACGGCATCGGTGATGATG 10070
Query 125993 GCGTGAATGGTGTCCACCC---CAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCA 126049
| || ||| | | | || | | ||| | | | || ||| || | ||
Sbjct 10069 TCCTGGATGACCTGCTTGCTGGCACGGCCCTTGAGGTGGGAGTGGAGGAGG--CATG-CA 10013
Query 126050 AACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGC 126109
|| || ||| |||||||||||||| |||||||| || || || ||| ||| || |||
Sbjct 10012 AAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCCAGGC 9953
Query 126110 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCC 126169
||||| || |||||||| | |||||| || | ||| | ||| ||||||||| |||
Sbjct 9952 ATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATACCC 9893
Query 126170 TCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTC---AAAC 126226
|| || || || || | |||||||| ||||||||| ||| || |||| | |
Sbjct 9892 TCGACGGCAGCAAAGGCGACGAGACGCTGAGCAAAGGA---CGAGTTCTTGTCCTGGATC 9836
Query 126227 CACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAG 126286
|| || ||||| | ||||| || ||| || |||| ||||| || || | |||
Sbjct 9835 CATCGGATGGCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTTGAAG 9776
Query 126287 AGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCG 126346
|| | | || | || || |||||||| | || ||||| || || || |||
Sbjct 9775 AGGTAGGTTCGTTGAGCAGGCTCCTTGATGTAGGTGTCAATGAGGAGCGAGTAGGTCTCG 9716
Query 126347 CCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTG 126405
||||| | | ||| || | ||| | ||||||| | || || ||| |||||
Sbjct 9715 GAGTGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCATCGGGCCTCGGGGATCTG 9657
Query 126406 TACCTCATCGGCAAAATTGTTATTGATA---TTCTCAAAAACAATTCCATCGGACCCAGC 126462
||||| | || ||| | | || | ||||| || || || || || ||||
Sbjct 9656 GACCTC-GCCGCTGAATCG--CTCGACAAGGTTCTCGTTGACGATGCCGTCAGAGGCAGC 9600
Query 126463 AAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCA 126519
|| || || ||||| | | ||| ||| || | | ||| || | |||||
Sbjct 9599 GAAGAAGGCGAGGATGTGGGAGACGAAGAACTGCTCGTCGGCAGTCAGGCGGTTGTTCCA 9540
Query 126520 GTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561
||||| |||||||| || ||||| | |||||| ||||||||
Sbjct 9539 GTCGTGGAGATCCTTGGATAGATCAATCTCCTCGGCAGTCCA 9498
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597214028331360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |