Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20cuneirostrum_20[genbank_20GCA_5F001680505.1_202016-07-06] 18,692 sequences; 49,007,756 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq398 331 9e-86 >seq398 Length=19136 Score = 331 bits (366), Expect = 9e-86 Identities = 1085/1673 (65%), Gaps = 46/1673 (3%) Strand=Plus/Plus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| | ||||||| |||||| ||||| ||| || |||||||||||||| ||||||| | Sbjct 13609 TACCAGTACTTTGGCTTCAAGACTCTTGAGCGATCCTACCTCCTCAAGATTGATGGCAAG 13668 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || ||||| || || || || | ||||| || | |||| || || |||| Sbjct 13669 ATTGTTGAGCGTCCCCAGCACATGATCATGCGTGTGTCTGTCGGCATCTGGGGTGACGAT 13728 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCACC 93897 || | ||| || | | | || |||| | |||| | ||| ||| || Sbjct 13729 ATTGAGCGTGTCCTGGAGACCTACAACCTCATGTCGAGCAAGTTCTTCACCCATGCCTCC 13788 Query 93898 CCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACG 93957 || ||||| ||||| || || || || ||| ||| |||| || || |||||| | Sbjct 13789 CCCACCCTCTTCAATGCTGGTACTCCCCAGCCTCAGCTGTCCTCATGCTTCCTGGTCGAT 13848 Query 93958 AACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCA 94017 | || | ||| ||| || |||| || | |||||| |||||| | ||||| Sbjct 13849 ATGAAAGAGGACAGCATTGAGGGTATTTATGATACTCTCAAGACCTGTGCCATGATCTCC 13908 Query 94018 AAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATC 94077 || ||||| || ||||| | | |||||| | ||||||| || || |||||| Sbjct 13909 AAGATGGCGGGTGGTATCGGCCTGAACGTCCACCGAATCCGTGCCACTGGCTCTTACATC 13968 Query 94078 CGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCG 94137 |||||||| || ||||||||||| || || ||||| || |||||||||||| | Sbjct 13969 GCTGGTACCAACGGTACCTCCAACGGTGTCACTCCCATGCTTCGTGTCTTCAACAACACT 14028 Query 94138 GCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAG 94197 || || ||||| ||||||||||| | | | ||| | || || |||| || ||| Sbjct 14029 GCCCGGTACGTCGACCAGGGTGGCAACAAGCGACCTGGTGCCTTTGCCATCTACCTTGAG 14088 Query 94198 CCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTG 94257 ||||||||||| || || | ||| | |||||||| |||||||||||||| || | Sbjct 14089 CCCTGGCACGCAGATGTCTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAG 14148 Query 94258 GAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTC 94317 | | ||| | ||||| ||| ||||||||| | || || || || ||||| || ||| Sbjct 14149 GTCCGCGCCCGCGACCTGTTCCTGGCTCTCTGGATTCCCGATCTCTTCATGAAGCGTGTC 14208 Query 94318 GAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTT 94377 ||||| ||| | ||||| || | |||||||| || || ||||| ||| ||||| Sbjct 14209 GAGAAGAACGGTGACTGGACCCTCATGTGTCCCAACGAGTGCCCCGGTCTGGCCGACTGC 14268 Query 94378 TGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCA---------GGGCAAG 94428 | ||| || || || | |||| ||||||| | | ||||||| Sbjct 14269 TATGG---------CGAGGAGTTCGAGGCTCTTTACGAAAAGTATGAGAAGGCGGGCAAG 14319 Query 94429 GCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAG 94488 | | ||| ||| | || |||||| ||| || ||| | || | ||| ||| Sbjct 14320 GGTCGCAAGACCATGAAGGCCCAGAAGCTCTGGTATGCCATCCTCGAGGCGCAGACCGAG 14379 Query 94489 ACGGGTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCA 94547 || || | |||| ||| | | |||||| | ||| |||| |||| ||||||| || | Sbjct 14380 ACCGGCAACCCCTTCATGCTCTACAAGGACCACTG-CAACCGCAAGAGCAACCAGAAGAA 14438 Query 94548 CCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGA 94607 ||| || ||| ||||| ||||| |||||||||||| ||||||| | || || Sbjct 14439 CCTGGGCACCATCCGTAGCTCCAATCTCTGCACCGAGATTATCGAGTACTGCGCCCCTGA 14498 Query 94608 CGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTA 94667 ||| ||||||| || ||||| | || | |||| | ||||| | || | | Sbjct 14499 TGAGGTTGCTGTCTGCAACCTTGCTTCTCTGGCCCTG----CCTTCGTTC---AT--CAA 14549 Query 94668 C-ACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATG--GT 94724 | ||| | ||||| | || | || || | || || | ||| || || Sbjct 14550 CTACG-ATGATGCTTGCTATGACTTCCAGAAGTTGCACGACGTCAC--ACAGGTTGTCGT 14606 Query 94725 CTTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTC 94784 |||||||||||| | |||||| |||| |||||| || |||| || ||| Sbjct 14607 TCGCAACCTGAACAGGATTATCGACGTGAACCACTACCCTGTTACGGAAGCTCGCAACAG 14666 Query 94785 AAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGAT 94844 ||| || || || ||||| || | || ||||||||| | || || || | | Sbjct 14667 CAACATGCGACACCGACCCATTGGTGTTGGTGTCCAGGGTCTTGCTGATGCTTTCCTTGC 14726 Query 94845 GATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAG 94904 |||| |||| | ||| ||| ||| || | | || | | || ||||| | Sbjct 14727 TCTGCGCATGCCTTTCGAGTCTCCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGAC 14786 Query 94905 CATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACA 94964 ||| || | | ||| | | || || || |||||| ||| | || || | Sbjct 14787 CATCTACCATGCTGCCCTCACTGCTTCGGTGCAGCTGGCCA---AGGAGGAGGGTCCCTA 14843 Query 94965 CGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGT 95024 | | ||| || || ||| |||| ||| | ||||||||| | ||| ||| Sbjct 14844 CTCCACCTTCAAGGGCTCTCCCGCCTCTGAGGGTATTCTCCAGTTCGACATGTGGAATGT 14903 Query 95025 GAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTGT 95084 |||||| || | || | |||||||| || || | | || | | ||||| | Sbjct 14904 GAAGCCTTCTGACCTCTGGGACTGGGAGAACCTCCGGGAGCAGGTCAAGGAGCACGGCAT 14963 Query 95085 GAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAA 95144 ||| ||||| | ||||| ||||| || ||| || |||||||||| ||||| Sbjct 14964 TCGCAACAGTCTGCTGCTTGCCCCTATGCCTACTGCCAGTACTTCGCAGATCCTGGGCAA 15023 Query 95145 CAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGA 95204 |||||||| ||||| || | |||||||||| | ||| | | || || ||||| || || Sbjct 15024 CAACGAGTGCTTCGAGCCTTACACCTCCAACATCTACCAGCGCCGTGTCCTCGCTGGCGA 15083 Query 95205 ATTCCCCGTCATCAACAAGCACCTCCTACGGGACC-TGACGTCTCTGGG--TGT-GTGGG 95260 |||| ||| ||||| || || ||||| || | | |||| ||| || || Sbjct 15084 GTTCCAGGTCGTCAACCCCTGGCTGCTCAAGGACCTTGTTGAC-ATGGGCCTGTGGTCGG 15142 Query 95261 GTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAA 95320 || || | || |||| | | | || ||||| ||| ||||||||||||| | | Sbjct 15143 ATGCCA---TGAAAAACCGAATCATTGCCGAGAACGGTTCCATCCAGAACATCCCCAACA 15199 Query 95321 TACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373 | || | || ||||||| |||||||||||||| |||||||| |||||||| Sbjct 15200 TCCCCGCCGAGGTCAAGGCCCTCTACAAGACCGTCTGGGAGATTTCGCAGCGC 15252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494607607924320