Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20cuneirostrum_20[genbank_20GCA_5F001680505.1_202016-07-06] 18,692 sequences; 49,007,756 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq398 132 8e-26 >seq398 Length=19136 Score = 132 bits (146), Expect = 8e-26 Identities = 454/688 (66%), Gaps = 26/688 (4%) Strand=Plus/Minus Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCA-CGGCAGGCCTGC-TTCTCAGATAGTACATG 203896 || ||| || |||||||| |||| | || |||||| ||||| ||| ||| ||||||||| Sbjct 15447 CTGGTCGACGGTGAACTGGATGG-GAGCAGCGGCAG-CCTGCGTTCGCAGGTAGTACATG 15390 Query 203897 CCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTG 203956 || ||||| ||||| || ||| ||| | ||||||| | | |||| || | || Sbjct 15389 CCCGTCTTCAGGCCGAGCTTCCAGCCGGCAAAGTGCATGCTGGTGATCTTGCCCATGGTG 15330 Query 203957 GGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGC 204015 ||||| |||||| ||||| || |||||| || || ||| ||||| || || || || Sbjct 15329 GGGTCCTTCATGTGGATGTTGAGGGACTGGGACTGATCAATG-AAGGCACCTCGGTCGGC 15271 Query 204016 GGCCATATTGATAA--TGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTG 204073 ||||| | | | ||| ||||||||||||||| || |||||| | | | | || Sbjct 15270 AGCCATCTGAACGACCTGG--CGCTGCGAAATCTCCCAGACGGTCTTGTAGAGGGCCTTG 15213 Query 204074 GTGT-GTTGAGGCACATCTT-CCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTC 204130 | | | || || || | || || ||| || ||||| ||||| || | || Sbjct 15212 ACCTCGGCGGGG---ATGTTGGGGATGTTCTGGATGGAACCGTTCTCGGCAATGATTCGG 15156 Query 204131 ATCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTG 204190 | || | | ||| ||||| ||||| | || ||| | ||| ||||||| Sbjct 15155 TTTTTCATGGCATCCGACCACAGGCCCATGTCAACAAGGTCCTTGAGCAGCCAGGGGTTG 15096 Query 204191 ATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCG 204250 | || ||| || || || | || || | || | | | |||| |||| | || ||| Sbjct 15095 ACGACCTGGAACTCGCCAGCGAGGACACGGCGCTGGTAGATGTTGGAGGTGTAAGGCTCG 15036 Query 204251 AACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGC 204310 || |||||||||||| | ||||| | || ||||| || ||||| || || || ||| Sbjct 15035 AAGCACTCGTTGTTGCCCAGGATCTGCGAAGTACTGGCAGTAGGCATAGGGGCAAGCAGC 14976 Query 204311 AGGGAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGT----CCAGTCGTG 204366 || |||||| | |||| | | || ||||| || ||||| |||||| Sbjct 14975 AGACTGTTGCGAATGCCGTGCTCCTTGA-CCTGC---TCCCGGAGGTTCTCCCAGTCCCA 14920 Query 204367 CATCGCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCT 204426 | || || ||||| ||||||||||||||| | || || | | | | || Sbjct 14919 GAGGTCAGAAGGCTTCACATTCCACATGTCGAACTGGAGAATACCCTCAGAGGCGGGAGA 14860 Query 204427 GCCCTTGTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCA-CGAGGCGGCCATGG 204485 ||||||| | || | || || ||||| | |||||| |||| ||| || | | || Sbjct 14859 GCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCCAGC-TGCACCGAAGCAGTGAGGG 14801 Query 204486 CGTGATAGTACATGGTCTCAAAGATCTG 204513 | || ||| |||||||| |||||||| Sbjct 14800 CAGCATGGTAGATGGTCTCGAAGATCTG 14773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794969411987520