Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20cuneirostrum_20[genbank_20GCA_5F001680505.1_202016-07-06]
18,692 sequences; 49,007,756 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq398 132 8e-26
>seq398
Length=19136
Score = 132 bits (146), Expect = 8e-26
Identities = 454/688 (66%), Gaps = 26/688 (4%)
Strand=Plus/Minus
Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCA-CGGCAGGCCTGC-TTCTCAGATAGTACATG 203896
|| ||| || |||||||| |||| | || |||||| ||||| ||| ||| |||||||||
Sbjct 15447 CTGGTCGACGGTGAACTGGATGG-GAGCAGCGGCAG-CCTGCGTTCGCAGGTAGTACATG 15390
Query 203897 CCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTG 203956
|| ||||| ||||| || ||| ||| | ||||||| | | |||| || | ||
Sbjct 15389 CCCGTCTTCAGGCCGAGCTTCCAGCCGGCAAAGTGCATGCTGGTGATCTTGCCCATGGTG 15330
Query 203957 GGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGC 204015
||||| |||||| ||||| || |||||| || || ||| ||||| || || || ||
Sbjct 15329 GGGTCCTTCATGTGGATGTTGAGGGACTGGGACTGATCAATG-AAGGCACCTCGGTCGGC 15271
Query 204016 GGCCATATTGATAA--TGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTG 204073
||||| | | | ||| ||||||||||||||| || |||||| | | | | ||
Sbjct 15270 AGCCATCTGAACGACCTGG--CGCTGCGAAATCTCCCAGACGGTCTTGTAGAGGGCCTTG 15213
Query 204074 GTGT-GTTGAGGCACATCTT-CCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTC 204130
| | | || || || | || || ||| || ||||| ||||| || | ||
Sbjct 15212 ACCTCGGCGGGG---ATGTTGGGGATGTTCTGGATGGAACCGTTCTCGGCAATGATTCGG 15156
Query 204131 ATCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTG 204190
| || | | ||| ||||| ||||| | || ||| | ||| |||||||
Sbjct 15155 TTTTTCATGGCATCCGACCACAGGCCCATGTCAACAAGGTCCTTGAGCAGCCAGGGGTTG 15096
Query 204191 ATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCG 204250
| || ||| || || || | || || | || | | | |||| |||| | || |||
Sbjct 15095 ACGACCTGGAACTCGCCAGCGAGGACACGGCGCTGGTAGATGTTGGAGGTGTAAGGCTCG 15036
Query 204251 AACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGC 204310
|| |||||||||||| | ||||| | || ||||| || ||||| || || || |||
Sbjct 15035 AAGCACTCGTTGTTGCCCAGGATCTGCGAAGTACTGGCAGTAGGCATAGGGGCAAGCAGC 14976
Query 204311 AGGGAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGT----CCAGTCGTG 204366
|| |||||| | |||| | | || ||||| || ||||| ||||||
Sbjct 14975 AGACTGTTGCGAATGCCGTGCTCCTTGA-CCTGC---TCCCGGAGGTTCTCCCAGTCCCA 14920
Query 204367 CATCGCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCT 204426
| || || ||||| ||||||||||||||| | || || | | | | ||
Sbjct 14919 GAGGTCAGAAGGCTTCACATTCCACATGTCGAACTGGAGAATACCCTCAGAGGCGGGAGA 14860
Query 204427 GCCCTTGTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCA-CGAGGCGGCCATGG 204485
||||||| | || | || || ||||| | |||||| |||| ||| || | | ||
Sbjct 14859 GCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCCAGC-TGCACCGAAGCAGTGAGGG 14801
Query 204486 CGTGATAGTACATGGTCTCAAAGATCTG 204513
| || ||| |||||||| ||||||||
Sbjct 14800 CAGCATGGTAGATGGTCTCGAAGATCTG 14773
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 794969411987520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |