Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20cuneirostrum_20[genbank_20GCA_5F001680505.1_202016-07-06]
18,692 sequences; 49,007,756 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq398 248 1e-60
seq1098 132 6e-26
seq1223 91.5 2e-13
>seq398
Length=19136
Score = 248 bits (274), Expect = 1e-60
Identities = 972/1509 (64%), Gaps = 51/1509 (3%)
Strand=Plus/Plus
Query 111546 TATTTTGGTCTCAAGACCCTCGAGAAAAGCTACCTCCA-AAGACTGGATGGTGTCTTGAT 111604
|| ||||| ||||||| || ||| | |||||||| |||| || |||| | |
Sbjct 13615 TACTTTGGCTTCAAGACTCTTGAGCGATCCTACCTCCTCAAGATTG-ATGGCAAGATTGT 13673
Query 111605 GGAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGA 111664
|| || ||| ||||| ||||||| || | |||| ||| || || ||||||||
Sbjct 13674 TGAGCGTCCCCAGCACATGATCATGCGTGTGTCTGTCGGCATCTGGGGTGACGATATTGA 13733
Query 111665 TTCTGTTTTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAAC 111724
||| ||||||| ||| || ||||| | | |||| ||| || | || ||
Sbjct 13734 GCGTGTCCTGGAGACCTACAACCTCATGTCGAGCAAGTTCTTCACCCATGCCTCCCCCAC 13793
Query 111725 CCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAA 111784
||||||||| |||||||| || || || ||||| || ||||| | | | ||
Sbjct 13794 CCTCTTCAATGCTGGTACTCCCCAGCCTCAGCTGTCCTCATGCTTCCTGGTCGATATGAA 13853
Query 111785 GGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTG 111844
||||| || | || ||||| | ||||||| |||||| ||||| |||
Sbjct 13854 AGAGGACAGCATTGAGGGTATTTATGATACTCTCAAGACCTGTGCCATGATCTCCAAGAT 13913
Query 111845 GGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGG 111904
||| ||||||||||| || || |||| || | |||| ||| || ||
Sbjct 13914 GGCGGGTGGTATCGGCCTGAACGTCCACCGAATCCGTGCCACTGGCTCTTACATCGCTGG 13973
Query 111905 TACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 111964
||| || ||| || | ||| | | ||| |||||||| || || ||| ||| || ||
Sbjct 13974 TACCAACGGTACCTCCAACGGTGTCACTCCCATGCTTCGTGTCTTCAACAACACTGCCCG 14033
Query 111965 CTATGTAAACCAAGCTGGGCGTCGCAAGGGATCTA------TCGCAGTCTATCTTGAGCC 112018
|| || |||| | ||| |||| || || | || |||| ||||||||
Sbjct 14034 GTACGTCGACCAGGGTGGCAA---CAAGCGACCTGGTGCCTTTGCCATCTACCTTGAGCC 14090
Query 112019 ATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGC 112078
|||||||| ||| || | ||||||||||| |||| ||||| || | |||||||
Sbjct 14091 CTGGCACGCAGATGTCTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGGT 14150
Query 112079 GCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGA 112138
|| |||||| || ||| |||||||||||||| ||||||||||||||| | || ||
Sbjct 14151 CCGCGCCCGCGACCTGTTCCTGGCTCTCTGGATTCCCGATCTCTTCATGAAGCGTGTCGA 14210
Query 112139 GGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGA-TGCCG 112197
| ||| || | ||| | ||| | ||||| || || |||||||| |||| |||
Sbjct 14211 GAAGAACGGTGACTGGACCCTCATGTGTCCCAACGAGTGCCCCGGTCTGGCCGACTGCTA 14270
Query 112198 TGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAG------AAAGTCGGGCGA 112251
| || |||||||| || || || ||| |||||| ||| | | | |||| ||
Sbjct 14271 T-GGCGAGGAGTTCGAGGCTCTTTACGAAAAGTATGAGAAGGCGGGCAAGGGTCGCAAGA 14329
Query 112252 CTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTG 112311
| || || |||| || | ||| | || || ||| || | || |||||||| |
Sbjct 14330 CCATGAAGG-CCCAGAAGC-----TCTGGTATGCCATCCTCGAGGCGCAGACCGAGACCG 14383
Query 112312 GTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGG 112371
| | || | ||||| ||||| ||| ||| |||| ||||| || || ||||| |||
Sbjct 14384 GCAACCCCTTCATGCTCTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACCTGG 14443
Query 112372 GTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGA 112431
| ||| || ||||| ||||| || || || | || | | | ||||||
Sbjct 14444 GCACCATCCGTAGCTCCAATCTCTGCACCGAGATTATCGAGTACTGCGCCCCTGATGAGG 14503
Query 112432 CGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGA 112491
||||| || ||||| || || | || || || | || || || || | ||
Sbjct 14504 TTGCTGTCTGCAACCTTGCTTCTCTGGCCCTGCC----TTCGTTCAT-CAACTACGATGA 14558
Query 112492 CATTTGATTATG------AAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAA 112545
||| |||| | || | ||||| || || | |||| ||||| |
Sbjct 14559 TGCTTG-CTATGACTTCCAGAAGTTGCACGACGTCACACAGGTTGTCGTTCGCAACCTGA 14617
Query 112546 ACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGAC 112605
|||| |||| || || ||||| ||| | ||||| || || ||| |||
Sbjct 14618 ACAGGATTATCGACGTGAACCACTACCCTGTTACGGAAGCTCGCAACAGCAACATGCGAC 14677
Query 112606 ACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATT-CTTTGTCGCCAC 112664
|||| || |||||| | |||||||| ||||| || |||| ||| || || || || ||
Sbjct 14678 ACCGACCCATTGGTGTTGGTGTCCAGGGTCTTGCTGATGCTTTCCTTGCTCTG-CG-CAT 14735
Query 112665 GCATTT-GATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCA 112723
|| ||| || || ||| || || |||| || || || ||||| || || ||
Sbjct 14736 GCCTTTCGAGTCTCCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGACCATCTACCA 14795
Query 112724 CGCCGCTCTTGAGGCGAGTTCGG---AGTTGGCAGAGGTTGATGGTCCATATGAAACCTT 112780
|| || || || ||||| || |||| ||| || ||||| || |||||
Sbjct 14796 TGCTGCCCTCACTGC---TTCGGTGCAGCTGGCCAAGGAGGAGGGTCCCTACTCCACCTT 14852
Query 112781 TGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAA 112840
|||| ||||| || || | || | || || || || |||| |||| |||| | |
Sbjct 14853 CAAGGGCTCTCCCGCCTCTGAGGGTATTCTCCAGTTCGACATGT-GGAATGTGA-AGCCT 14910
Query 112841 GCT--TCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAAC 112898
|| | || |||||||| ||| ||| | |||||||| | || |||| |||
Sbjct 14911 TCTGACCTCTGGGACTGGGAGAACCTCCGGGAGCAGGTCAAGGAGCACGGCATTCGCAAC 14970
Query 112899 AGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAA 112958
||||| || | || || ||||| || ||| || | || ||| |||| || || ||
Sbjct 14971 AGTCTGCTGCTTGCCCCTATGCCTACTGCCAGTACTTCGCAGATCCTGGGCAACAACGAG 15030
Query 112959 TGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTG 113018
||||| || || ||||| | |||||||| | | | | |||||| || ||||| |
Sbjct 15031 TGCTTCGAGCCTTACACCTCCAACATCTACCAGCGCCGTGTCCTCGCTGGCGAGTTCCAG 15090
Query 113019 ATTGTCAAC 113027
| ||||||
Sbjct 15091 GTCGTCAAC 15099
>seq1098
Length=11580
Score = 132 bits (146), Expect = 6e-26
Identities = 204/286 (71%), Gaps = 4/286 (1%)
Strand=Plus/Plus
Query 102048 CTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGC-AGCTCTTTGAAGCCATCCA 102106
||||| |||| || || ||||| |||| | | ||| | | ||||| | ||||| |
Sbjct 9732 CTCATTGACACCTACATCAAGGAGCCTGCTCA-ACGAACCTACCTCTTCAACGCCATTGA 9790
Query 102107 AACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGT 102165
|| | || || || | ||||| || || ||||| || ||| | | ||||
Sbjct 9791 GACCATCCCCTGCATCCGCAAGAAGGCCGACTGGGCCATCCGATGGATCCAGGACAAGAA 9850
Query 102166 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 102225
| ||| |||||||| |||| ||| |||| ||||| || ||||||||||||||| |
Sbjct 9851 CTCGT-CCTTTGCTCAGCGTCTCGTCGCCTTTGCTGCCGTCGAGGGTATCTTCTTCAGCG 9909
Query 102226 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 102285
|| |||| | | || | |||||||||||||| || |||||||| || || ||| |
Sbjct 9910 GTGCCTTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTTT 9969
Query 102286 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331
|||||||||| ||||||||||||||||| || ||| || |||||
Sbjct 9970 CCAACGAGCTCATCTCTCGTGACGAGGGTCTTCACACCGACTTTGC 10015
>seq1223
Length=10093
Score = 91.5 bits (100), Expect = 2e-13
Identities = 302/461 (66%), Gaps = 18/461 (4%)
Strand=Plus/Minus
Query 15885 CGATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCG 15944
|||||||| || || || || | | || | || || ||||| | || || || ||
Sbjct 8955 CGATCAAATCGTCCAGGTCGCATCAAGGCCTTGTCGAGCATATCCGCTCGGTTGGTACCG 8896
Query 15945 GCGATGACAACAATACCTGTTTC--GTTATCAAAACCATCCATCTCTGTCAAAAGCTGGT 16002
|| | ||| |||| |||| | | | | | ||||| |||||||| |||| || |||||
Sbjct 8895 GCCAGGACGACAA--CCTGCTCCCGGGTGTTGAAACCGTCCATCTCGGTCAGAATCTGGT 8838
Query 16003 TAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGC---GTTGCTTTC 16059
| | ||| ||||| || || || | | ||| | |||| || || ||
Sbjct 8837 TCAGAGTCGCCTCCCGCTCGTCGTTGCCACCGAAACCCCGGCCACTCTCCTGTCGCGCTC 8778
Query 16060 ---CCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTT 16116
| | ||| || |||||||| || |||| |||||| || || | || | |
Sbjct 8777 GACCAATGGCGTCGATCTCATCGATAAAGATGATGCAAGGAGCGTTCTTACGGCCTTCGG 8718
Query 16117 CAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGG 16176
| || || || || ||||| | || ||||||||||||||||| || || | |
Sbjct 8717 CGAACAGGTCTCGCACACGGGAAGGACCAACACCAACAAACATCTCGACGAATTCAGAAC 8658
Query 16177 CGGA-ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTC 16235
|| ||| || | ||||||||| ||| || || || | || |||||| | |||
Sbjct 8657 CGCTCACACTGAA-GAAGGGGACTCCAGACTCGCCAGCTGTAGCCTTGGCGAGCAATGTC 8599
Query 16236 TTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC--ACTTC 16293
||||||||||| || || || || | ||| ||||| ||||||||||| || ||||
Sbjct 8598 TTACCCGTACCAGGGGGGCCAGCCAGAATGGCTCCTCGGGGAATCTTGGCACCGAGCTTC 8539
Query 16294 -CAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAATCTC 16333
|||| | |||| || ||||| || || ||||| |||
Sbjct 8538 TCAAACT---TCTCGGGCTGCTTCAGGAAGCTCACAAACTC 8501
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620597363538240
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