Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20cuneirostrum_20[genbank_20GCA_5F001680505.1_202016-07-06]
18,692 sequences; 49,007,756 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq1223 138 1e-27
seq1098 104 3e-17
seq330 86.0 7e-12
>seq1223
Length=10093
Score = 138 bits (152), Expect = 1e-27
Identities = 318/466 (68%), Gaps = 26/466 (6%)
Strand=Plus/Minus
Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562
||||| || || || || || | | || | || || ||||| | ||||| ||| ||
Sbjct 8955 CGATCAAATCGTCCAGGTCGCATCAAGGCCTTGTCGAGCATATCCGCTCGGTTGGTACCG 8896
Query 11563 GCAATGACTACAATGCCAG-TCTCAT-TGTCGAAACCGTCCATTTCTGTGAGAAGCTGGT 11620
|| | ||| |||| || | || | ||| |||||||||||| || || |||| |||||
Sbjct 8895 GCCAGGACGACAA--CCTGCTCCCGGGTGTTGAAACCGTCCATCTCGGTCAGAATCTGGT 8838
Query 11621 TGATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCACCTGCCGAACGCTTCTTAC--- 11677
| | ||| || ||||| |||||| | ||| || ||| || || || |
Sbjct 8837 TCAGAGTCGCCTCCCGCTCGTCGTTGCCACCGAAACC-CCGGCC--ACTCTCCTGTCGCG 8781
Query 11678 --CGACA----GCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCT 11731
|||| ||||| ||||||||||| || | ||| || || ||| ||| | |
Sbjct 8780 CTCGACCAATGGCGTCGATCTCATCGATAAAGATGATGCAAGGAGCGTTCTTACGGCCTT 8721
Query 11732 GTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTG 11791
|||| || || || ||||| | |||||||| || |||||||| ||||| | |
Sbjct 8720 CGGCGAACAGGTCTCGCACACGGGAAGGACCAACACCAACAAACATCTCGACGAATTCAG 8661
Query 11792 --CGGCAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAG 11849
| || | ||||||| |||||| || |||||| ||||| | || ||||| |
Sbjct 8660 AACCGCTCA-CACTGAA-GAAGGGGACTCCAGACTCGCCAGCTGTAGCCTTGGCGAGCAA 8603
Query 11850 AGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC--A 11907
||||||||||||||||| | ||||| |||| ||| || ||||| |||||||||||
Sbjct 8602 TGTCTTACCCGTACCAGGGGGGCCAGCCAGAATGGCTCCTCGGGGAATCTTGGCACCGAG 8543
Query 11908 CTTC-CAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCC 11952
|||| |||| | ||| |||| ||| |||||| ||||| ||||
Sbjct 8542 CTTCTCAAACT---TCTCGGGCTGCTTCAGGAAGCTCACAAACTCC 8500
>seq1098
Length=11580
Score = 104 bits (114), Expect = 3e-17
Identities = 200/289 (69%), Gaps = 7/289 (2%)
Strand=Plus/Minus
Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567
||||| || || || |||||||||||||| || ||| || ||||||||||| ||
Sbjct 10003 TGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCCAGGCATGAGGCCA 9944
Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627
| ||||| ||||| ||||||| ||| || |||||||| ||||| ||
Sbjct 9943 CGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATACCCTCGACGGCA 9884
Query 119628 GCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAG-ACTTGTC---GAACCACTTGAGAGC 119683
|| || |||| ||||||| ||| ||||| |||| |||||| || ||| || ||
Sbjct 9883 GCAAAGGCGACGAGACGCTGAGC-AAAGGACGAGTTCTTGTCCTGGATCCATCGGATGGC 9825
Query 119684 CCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAA-AAGTTGCTTCT 119742
||||| |||||| |||||||||| || | ||||| | ||| | || | |||
Sbjct 9824 CCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTTGAAGAGGTAGGTTC- 9766
Query 119743 TTTCAGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGTCTC 119791
|| |||| ||||| || || | |||||||| |||||||||||
Sbjct 9765 GTTGAGCAGGCTCCTTGATGTAGGTGTCAATGAGGAGCGAGTAGGTCTC 9717
>seq330
Length=20877
Score = 86.0 bits (94), Expect = 7e-12
Identities = 213/321 (66%), Gaps = 2/321 (1%)
Strand=Plus/Minus
Query 11683 GCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGT-TCGAAAAG 11741
||||||| ||||||||| || || || || |||| || || | | | ||| ||
Sbjct 16724 GCGTCAAGCTCATCGATAAAGACAATTGCAGGAGACTTGG-ACTTGGCAGCGTTGAAGAG 16666
Query 11742 TTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCAGAACA 11801
|| || || ||||| ||||| ||||| || || ||||| | || | ||||
Sbjct 16665 CTCGCGAACTCGCTTGGCTCCGACACCCACAAAGATCTCGTCAAACTCGCTACCAGACAT 16606
Query 11802 CTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGT 11861
| | ||||||||| | ||| ||||| | |||||| || || |||||||| || ||
Sbjct 16605 GTAGAAGAAGGGAACTCCGGCCTCGCCAGCAACGGCTCGGGCAAGAAGAGTCTTTCCGGT 16546
Query 11862 ACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACTTCCAAAGTAGCG 11921
||| || | ||| | || || | || ||| | |||||||||| | | |
Sbjct 16545 ACCGGGAGGGCCAACCAGGAGAACACCCTTGGGCAGCTTGGCACCAAGGTCGCTGAACTT 16486
Query 11922 CTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCGGAGTCGATACC 11981
|| || |||||||| || || || | ||||| || ||||||||||| |||| ||
Sbjct 16485 TTCGGGGTTCTTGAGAAACTCGACCACCTCCTGGAGCTCCTCCTTGGCCTCGTCGCAGCC 16426
Query 11982 CTCAACATCGGTGAAACGAGT 12002
| |||||| |||| || ||
Sbjct 16425 GTGGACATCGCTGAATCGTGT 16405
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588838385757600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |