Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20cuneirostrum_20[genbank_20GCA_5F001680505.1_202016-07-06]
18,692 sequences; 49,007,756 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq398 201 1e-46
>seq398
Length=19136
Score = 201 bits (222), Expect = 1e-46
Identities = 921/1437 (64%), Gaps = 39/1437 (3%)
Strand=Plus/Minus
Query 105895 GTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGG 105954
|||||| | | ||||| || |||||| | | | | |||||||| | ||||| ||
Sbjct 15099 GTTGACGACCTGGAACTCGCCAGCGAGGACACGGCGCTGGTAGATGTTGGAGGTGTAAGG 15040
Query 105955 TTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCAT 106014
|| ||||| || || || |||| ||| || | || ||| || ||||| || || |
Sbjct 15039 CTCGAAGCACTCGTTGTTGCCCAGGATCTGCGAAGTACTGGCAGTAGGCATAGGGGCAAG 14980
Query 106015 CAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTA 106074
|| |||||||| |||| || | ||||||| | ||| ||| |||||||| |
Sbjct 14979 CAGCAGACTGTTGCGAATGCCGTGCTCCTTGACCTGCTCCCGGAGGTTCTCCCAGTCCCA 14920
Query 106075 GTTG--AGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGA 106132
| | || || ||||| |||| |||| || || || || | || | || | ||||
Sbjct 14919 GAGGTCAGAA-GGCTTCACATTCC-ACATGTCGAACTGGAGAATACCCTCAGAGGCGGGA 14862
Query 106133 GAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATT-CACAGCTCGCCTCCAG 106191
|| |||| || || |||| ||| | | | |||| | ||| | || ||
Sbjct 14861 GAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCCAGCTGCACCGAA-GCAGTGAG 14803
Query 106192 GGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATC 106251
|| || || || ||||| || ||||| | || | ||| || || || ||
Sbjct 14802 GGCAGCATGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGAGACTC 14743
Query 106252 -AAATGCGTAGCGGCACAA-AATAAATACATCCGCGAGACCTTGAACACCCAAACCAATA 106309
||| || | ||| || | || || |||| || ||||| || ||||| | ||||||
Sbjct 14742 GAAAGGCAT-GCG-CAGAGCAAGGAAAGCATCAGCAAGACCCTGGACACCAACACCAATG 14685
Query 106310 GGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATG 106369
|||| ||||||||| || || || || | ||| || || || ||| ||
Sbjct 14684 GGTCGGTGTCGCATGTTGCTGTTGCGAGCTTCCGTAACAGGGTAGTGGTTCACGTCGATA 14625
Query 106370 ACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAA 106429
| | ||| || || |||| || ||||| || || | || | | ||| |
Sbjct 14624 ATCCTGTTCAGGTTGCGAACGACAACCTGTGTGACGTCGTGCAACTTCTGGAAGTCATA- 14566
Query 106430 GTGCGAGTCTCTTCAT---TGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACA 106486
|| || || || | ||| || || ||||| | || || | ||||| |||
Sbjct 14565 --GCAAGCATCATCGTAGTTGATGAACGAAGGCAGGGCCAGAGAAGCAAGGTTGCAGACA 14508
Query 106487 GCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATC 106546
|| |||||| | |||||| | ||| || || || | ||||| || ||
Sbjct 14507 GCAACCTCATCAGGGGCGCAGTACTCGATAATCTCGGTGCAGAGATTGGAGCTACGGATG 14448
Query 106547 GTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGC 106606
|| |||| ||||| ||||| ||||| |||||| ||||||||||||||| ||||
Sbjct 14447 GTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGG 14388
Query 106607 GTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAAT 106665
| || ||||| ||||| | || ||| || || | ||| | | || | | || ||
Sbjct 14387 TTGCCGGTCTCGGTCTGCGCCTCGAGGATGGCATACCAGAGCTTCTGGGCCT----TCAT 14332
Query 106666 GGCGTTG-GCCCGT--CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACC 106722
|| ||| | || | ||| || ||| |||||| ||| || || || |||||||| |
Sbjct 14331 GGTCTTGCGACCCTTGCCCGCCTTCTCATACTTTTCGTAAAGAGCCTCGAACTCCTC-GC 14273
Query 106723 CACCGC-GTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCT 106781
|| || ||||| ||||| || || || ||||| | || | ||| | ||| ||
Sbjct 14272 CATAGCAGTCGGCCAGACCGGGGCACTCGTTGGGACACATGAGGGTCCAGTCACCGTTCT 14213
Query 106782 CCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACC 106841
||| || ||||||||||| || || |||||||| || | || || || | |
Sbjct 14212 TCTCGACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCCAGGAACAGGTCGCGGGCGC 14153
Query 106842 GAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCC 106901
| |||| || | || ||||| || | ||||||||||| | || ||| |||||||
Sbjct 14152 GGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCTGCGTGCC 14093
Query 106902 ATGGCTCAAGATAGACTGCGA------TAGATCCCTTTCGACGCCCAGCTTGATTTACAT 106955
| |||||||| |||| || | || || ||| | | ||| | || | || |
Sbjct 14092 AGGGCTCAAGGTAGATGGCAAAGGCACCAGGTCGCTT--GTTG-CCACCCTGGTCGACGT 14036
Query 106956 AGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTG 107015
| || || ||| ||| || || |||||||| ||| | | ||| | || ||| || |
Sbjct 14035 ACCGGGCAGTGTTGTTGAAGACACGAAGCATGGGAGTGACACCGTTGGAGGTACCGTTGG 13976
Query 107016 TCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAG 107075
| || || ||| | |||| | | |||| || || || ||||| || |
Sbjct 13975 TACCAGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGACGTTCAGGCCGATACCACCCG 13916
Query 107076 CCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCT 107135
|| ||| ||||| ||||| | | ||||| |||| ||||| | || |||||
Sbjct 13915 CCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAAATACCCTCAATGCTGTCCT 13856
Query 107136 CCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGA 107195
| || | ||| |||||||| ||||| ||| || || ||||||||||||||||
Sbjct 13855 CTTTCATATCGACCAGGAAGCATGAGGACAGCTGAGGCTGGGGAGTACCAGCATTGAAGA 13796
Query 107196 GGGTTGGTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCCAAGAC 107253
|||| || | || || ||| | | |||| ||||| || ||| ||||||| |||
Sbjct 13795 GGGTGGGGGAGGCATGGGTGA--AGAACTTGCTCGACATGAGGTTGTAGGTCTCCAGGAC 13738
Query 107254 AGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATTGGGG 107310
| ||||| || || || |||||||| | ||||||||| | ||||| |||||
Sbjct 13737 ACGCTCAATATCGTCACCCCAGATGCCGACAGACACACGCATGATCATGTGCTGGGG 13681
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589842950986080
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