Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20cuneirostrum_20[genbank_20GCA_5F001680505.1_202016-07-06] 18,692 sequences; 49,007,756 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq398 464 1e-125 seq1098 206 5e-48 >seq398 Length=19136 Score = 464 bits (514), Expect = 1e-125 Identities = 1252/1884 (66%), Gaps = 92/1884 (5%) Strand=Plus/Minus Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612 || || ||||| | ||| |||| ||||||| || || || ||||||||||| ||||| Sbjct 15440 ACGGTGAACTGGATGGGAGCAGCGGCAGCCTGCGTTCGCAGGTAGTACATGCCCGTCTTC 15381 Query 212613 AGGCC---CTTGCCCCAGCCGTGCATGTGCATTGCTG-TGAGTTTCTTCAGCTTAATATT 212668 ||||| ||| ||||||| | |||||| |||| ||| |||| | || | Sbjct 15380 AGGCCGAGCTT---CCAGCCGGCAAAGTGCAT-GCTGGTGA---TCTTGCCC---ATGGT 15331 Query 212669 CTGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGC 212728 |||| | | |||| | ||| |||||||| ||| || ||||| | | Sbjct 15330 GGGGTCCTTCATGTGG---------ATGTTGAGGGACTGGGACTGATCAATGAAGGCACC 15280 Query 212729 CCTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGAT 212788 | ||| || ||||| | | || | | ||| || | |||||| ||||||||| ||| Sbjct 15279 TCGGTCGGCAGCCATCTGAACGACCTGGCGCTGCGAAATCTCCCAGACGGTCTTGTAGAG 15220 Query 212789 TTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCA- 212847 | |||| || | |||| | |||||||||||| | || || || | | | || Sbjct 15219 GGCCTTGACCTCGGCGGGGATGTTGGGGATGTTCTGGATGGAACC---GT-TCTCGGCAA 15164 Query 212848 -GCTGCAGGCG--CATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGT 212904 | | | | |||| | || ||| |||||| || | ||| ||||| ||| Sbjct 15163 TGATTCGGTTTTTCATGGCATCCGACCACAGGCCCATGTCAACAAGGTCCTTGAGCAGCC 15104 Query 212905 GAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGT 212964 |||||||| | |||||| || || | ||| || | | |||||| | ||| || |||| Sbjct 15103 AGGGGTTGACGACCTGGAACTCGCCAGCGAGGACACGGCGCTGGTAGATGTTGGAGGTGT 15044 Query 212965 AGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAG 213024 | ||||||| || ||||||||| ||||| ||||| | ||| ||||| || ||||| || | Sbjct 15043 AAGGCTCGAAGCACTCGTTGTTGCCCAGGATCTGCGAAGTACTGGCAGTAGGCATAGGGG 14984 Query 213025 CCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGT 213084 | | ||| |||||||| | | |||||||| || | ||| || | |||||| Sbjct 14983 CAAGCAGCAGACTGTTGCGAATGCCGTGCTCCTTGACCTGCTCCCGGAGGTTCTCCCAGT 14924 Query 213085 CCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTT 213144 |||| | |||| ||| |||||| ||||||||||| ||||| | || || Sbjct 14923 CCCAGAGGTCAGA-AGG--------CTTCACATTCCACATGTCGAACTGGAGAATACC-- 14875 Query 213145 TGCTCA----CGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCG 213200 |||| |||| ||||| | | | ||||||||| || | |||||||||||||| | Sbjct 14874 --CTCAGAGGCGGGAGAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCCAGCT-G 14818 Query 213201 CA-GGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTT 213259 || || || |||||||| | ||||||||| || || |||| | ||||||||| Sbjct 14817 CACCGAAGCAGTGAGGGCAGCATGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTCACG 14758 Query 213260 GGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGAC 213319 ||||| || ||| ||| ||||| || |||| ||||||| || |||||||| Sbjct 14757 AGCCTCGGGAGACTCGAAAGGCATGCGCAGAGCAAGGAAAGCATCAGCAAGACCCTGGAC 14698 Query 213320 CCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAA 213378 || | || ||||||| ||||| || ||| ||| |||| ||| | ||||| Sbjct 14697 ACCAACACCAATGGGTCGGTGTCGCATGTTGCTGTTGCGAGC-TTCCGTAACAGGGTAGT 14639 Query 213379 AGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGT 213438 ||| |||||| ||| |||| |||||||| | | || | ||||| | | || Sbjct 14638 GGTTCACGTCGATAATCCTGTTCAGGTTGCGAACGACAACCTGTGTGACGTCGTGCA--- 14582 Query 213439 ACTCGTGATTGAACACGTAGC------CCCCGTCCTGCACAAACTCAGGCAGGGCGATGC 213492 ||| || ||| | |||| | ||| | | ||| ||||||||| | Sbjct 14581 ACTTCTG---GAAGTCATAGCAAGCATCATCGTAGTTGATGAACGAAGGCAGGGCCAGAG 14525 Query 213493 TGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACA 213552 || |||||||| || || ||||| | || | | |||||| || ||||||||||| | Sbjct 14524 AAGCAAGGTTGCAGACAGCAACCTCATCAGGGGCGCAGTACTCGATAATCTCGGTGCAGA 14465 Query 213553 GGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAG-AATCC 213611 | ||| || ||||||||||||||||||| ||| ||| ||||| | |||| ||| Sbjct 14464 GATTGGAGCTACGGATGGTGCCCAGGTTCTTCTGG-TTGCTCTTGCGGTTGCAGTGGTCC 14406 Query 213612 TTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGC--TCCAGA 213669 |||||||||||| ||||| |||||||| ||| | | | || | |||| ||||| Sbjct 14405 TTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGCGCCTCGAGGA--TGGCATACCAGA 14348 Query 213670 GGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGA 213729 | | | |||||| || | || | | | || ||| |||| |||||| | Sbjct 14347 GCTTCTGGGCCTT---CATGGTCTTGCGACCCTTGCCCGCCTTCTCATACTTTTCGTAAA 14291 Query 213730 GCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGA 213789 | | | ||| || | ||| || | |||| || || || ||||||||||| Sbjct 14290 GAGCCTCGAACTCCTCGCCATAGCAGTCGGCCAGACCGGGGCACTCGTTGGGACACATGA 14231 Query 213790 GGCTCCAGTCCCCG-TCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCG 213848 || ||||||| ||| || |||| ||| | || |||||| || || || | ||| || || Sbjct 14230 GGGTCCAGTCACCGTTCTTCTC-GACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCC 14172 Query 213849 GTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAG 213908 ||||||||| | || | ||| ||| || ||| |||||||| || || || Sbjct 14171 AGGAACAGGTCGCGGGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAAC 14112 Query 213909 TCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTG 213965 ||||||| || |||||||| ||||| | ||||||||||||||| || | || | ||| Sbjct 14111 TCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCAGGTCGCTTGTTG 14052 Query 213966 CCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCG 214025 || |||||||| || || ||| ||||||||| || || | ||| | ||| Sbjct 14051 CCACCCTGGTCGACGTACCGGGCAGTGTTGTTGAAGACACGAAGCATGGGAGTGACACCG 13992 Query 214026 TTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCC---TCAGGTTGCTCATG 214082 ||||| |||||||| || || || || ||||| | ||| | | ||| | | | Sbjct 13991 TTGGAGGTACCGTTGGTACCAGCGATGTAAGAGCCAGTGGCACGGATTCGGTGG---ACG 13935 Query 214083 GAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATG 214142 || || || ||||| || ||||||||||||||| ||| | | | ||| || Sbjct 13934 TTCAGGCCGATACCACCCGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAA 13875 Query 214143 ATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTG 214202 || || | |||||||| ||| | | | | || |||||| || ||||| ||| | Sbjct 13874 ATACCCTCAATGCTGTCCTCTTTCATATCGACCAGGAAGCATGAGGACAGCTGAGGCTGG 13815 Query 214203 GACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGC 214262 | | |||| ||||| || |||||| ||||||| | | |||||| | || | ||| Sbjct 13814 GGAGTACCAGCATTGAAGAGGGTGGGGGAGGCATGGGTGAAGAACTTGCTCGACATGAGG 13755 Query 214263 CTGTAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAG-CGCACCTCAT 214321 |||||||||||||||| || |||| ||| | || | || | ||| Sbjct 13754 TTGTAGGTCTCCAGGACACGCTCAATATCGTCACCCCAGATGCCGACAGACACA-CGCAT 13696 Query 214322 CAGCATGTGCTGGGGCCTCTCTATGGGTCCTTTGGGGCC---CTTGAGCAGGTAGGAGCG 214378 | |||||||||||| | ||| | || ||| | |||||| |||||||| || Sbjct 13695 GATCATGTGCTGGGGACGCTC-AACAATC--TTGCCATCAATCTTGAGGAGGTAGGATCG 13639 Query 214379 CTCCAGAGTCTTGAACCCAAAGTA 214402 ||| ||||||||||| |||||||| Sbjct 13638 CTCAAGAGTCTTGAAGCCAAAGTA 13615 >seq1098 Length=11580 Score = 206 bits (228), Expect = 5e-48 Identities = 487/729 (67%), Gaps = 11/729 (2%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | ||||| |||||||| ||||| || | | ||||||||||| Sbjct 10307 CTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTC 10248 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957 ||||||| ||||||||||| | || || ||| | || ||| | | || | Sbjct 10247 CATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCT-TCTCGTTGCCGAGGGCGACGAGGA 10189 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 || | || |||||| |||||||||| | ||||||| | ||||||||| | |||| Sbjct 10188 GGCGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTCGGCGTTCATGCCGAGCAGGG 10129 Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077 ||| | |||| || || ||||||| ||| || ||||| || | || | Sbjct 10128 CGCAGGGGAGGGCCTCGGTCAGGAACTCCTGCTCAATGGTGACGGCATCGGTGATGATGT 10069 Query 48078 GCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAA 48137 || | | || || || | || | | | | || | ||| | ||| |||| Sbjct 10068 CCTGGATGACCTGCT-TGCTGGCACG--GCCCTTGAGGTGGGAGTGGAGGAGGCATGCAA 10012 Query 48138 AGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCA 48197 |||| |||| | || ||||| || ||||||| ||||||| ||| || ||||||| Sbjct 10011 AGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCCAGGCA 9952 Query 48198 TGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCT 48257 ||| || | || ||||||||||| || | || || | || ||||||||| |||| Sbjct 9951 TGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATACCCT 9892 Query 48258 CCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGG 48317 | || || || || ||| ||| | || | || || | ||||||||| |||||| Sbjct 9891 CGACGGCAGCAAAGGCGACGAGACGCTGAGCAAAGGACGAGTTCTTGTCCTGGATCCATC 9832 Query 48318 AAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCT 48377 | |||||||| |||||||| |||||| || || ||||| ||||| |||||| | Sbjct 9831 GGATGGCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTTGAAGAGGT 9772 Query 48378 TCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGTACATCTCAG 48434 | | | | | | ||| | ||||| | |||| ||| | ||| |||| | Sbjct 9771 AGGTTCGTTGAGCAGGCTCCTTGATGTAGGTGTCAATGAGGAGC---GAGTAGGTCTCGG 9715 Query 48435 AGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCA 48494 |||| | ||||| || ||||||||| ||||||||| | |||||| | ||| | Sbjct 9714 AGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGGGCCTCGGGGATCTGGA 9655 Query 48495 CTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGA 48554 | || | ||||| ||| | || ||||| ||||| || || || || ||||| |||| Sbjct 9654 CCTCGCCGCTGAATCGCTCGACAAGGTTCTCGTTGACGATGCCGTCAGAGGCAGCGAAGA 9595 Query 48555 AGGCAAGGA 48563 |||| |||| Sbjct 9594 AGGCGAGGA 9586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931315147361280