Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20cuneirostrum_20[genbank_20GCA_5F001680505.1_202016-07-06]
18,692 sequences; 49,007,756 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq398 464 1e-125
seq1098 206 5e-48
>seq398
Length=19136
Score = 464 bits (514), Expect = 1e-125
Identities = 1252/1884 (66%), Gaps = 92/1884 (5%)
Strand=Plus/Minus
Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612
|| || ||||| | ||| |||| ||||||| || || || ||||||||||| |||||
Sbjct 15440 ACGGTGAACTGGATGGGAGCAGCGGCAGCCTGCGTTCGCAGGTAGTACATGCCCGTCTTC 15381
Query 212613 AGGCC---CTTGCCCCAGCCGTGCATGTGCATTGCTG-TGAGTTTCTTCAGCTTAATATT 212668
||||| ||| ||||||| | |||||| |||| ||| |||| | || |
Sbjct 15380 AGGCCGAGCTT---CCAGCCGGCAAAGTGCAT-GCTGGTGA---TCTTGCCC---ATGGT 15331
Query 212669 CTGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGC 212728
|||| | | |||| | ||| |||||||| ||| || ||||| | |
Sbjct 15330 GGGGTCCTTCATGTGG---------ATGTTGAGGGACTGGGACTGATCAATGAAGGCACC 15280
Query 212729 CCTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGAT 212788
| ||| || ||||| | | || | | ||| || | |||||| ||||||||| |||
Sbjct 15279 TCGGTCGGCAGCCATCTGAACGACCTGGCGCTGCGAAATCTCCCAGACGGTCTTGTAGAG 15220
Query 212789 TTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCA- 212847
| |||| || | |||| | |||||||||||| | || || || | | | ||
Sbjct 15219 GGCCTTGACCTCGGCGGGGATGTTGGGGATGTTCTGGATGGAACC---GT-TCTCGGCAA 15164
Query 212848 -GCTGCAGGCG--CATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGT 212904
| | | | |||| | || ||| |||||| || | ||| ||||| |||
Sbjct 15163 TGATTCGGTTTTTCATGGCATCCGACCACAGGCCCATGTCAACAAGGTCCTTGAGCAGCC 15104
Query 212905 GAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGT 212964
|||||||| | |||||| || || | ||| || | | |||||| | ||| || ||||
Sbjct 15103 AGGGGTTGACGACCTGGAACTCGCCAGCGAGGACACGGCGCTGGTAGATGTTGGAGGTGT 15044
Query 212965 AGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAG 213024
| ||||||| || ||||||||| ||||| ||||| | ||| ||||| || ||||| || |
Sbjct 15043 AAGGCTCGAAGCACTCGTTGTTGCCCAGGATCTGCGAAGTACTGGCAGTAGGCATAGGGG 14984
Query 213025 CCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGT 213084
| | ||| |||||||| | | |||||||| || | ||| || | ||||||
Sbjct 14983 CAAGCAGCAGACTGTTGCGAATGCCGTGCTCCTTGACCTGCTCCCGGAGGTTCTCCCAGT 14924
Query 213085 CCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTT 213144
|||| | |||| ||| |||||| ||||||||||| ||||| | || ||
Sbjct 14923 CCCAGAGGTCAGA-AGG--------CTTCACATTCCACATGTCGAACTGGAGAATACC-- 14875
Query 213145 TGCTCA----CGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCG 213200
|||| |||| ||||| | | | ||||||||| || | |||||||||||||| |
Sbjct 14874 --CTCAGAGGCGGGAGAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCCAGCT-G 14818
Query 213201 CA-GGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTT 213259
|| || || |||||||| | ||||||||| || || |||| | |||||||||
Sbjct 14817 CACCGAAGCAGTGAGGGCAGCATGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTCACG 14758
Query 213260 GGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGAC 213319
||||| || ||| ||| ||||| || |||| ||||||| || ||||||||
Sbjct 14757 AGCCTCGGGAGACTCGAAAGGCATGCGCAGAGCAAGGAAAGCATCAGCAAGACCCTGGAC 14698
Query 213320 CCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAA 213378
|| | || ||||||| ||||| || ||| ||| |||| ||| | |||||
Sbjct 14697 ACCAACACCAATGGGTCGGTGTCGCATGTTGCTGTTGCGAGC-TTCCGTAACAGGGTAGT 14639
Query 213379 AGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGT 213438
||| |||||| ||| |||| |||||||| | | || | ||||| | | ||
Sbjct 14638 GGTTCACGTCGATAATCCTGTTCAGGTTGCGAACGACAACCTGTGTGACGTCGTGCA--- 14582
Query 213439 ACTCGTGATTGAACACGTAGC------CCCCGTCCTGCACAAACTCAGGCAGGGCGATGC 213492
||| || ||| | |||| | ||| | | ||| ||||||||| |
Sbjct 14581 ACTTCTG---GAAGTCATAGCAAGCATCATCGTAGTTGATGAACGAAGGCAGGGCCAGAG 14525
Query 213493 TGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACA 213552
|| |||||||| || || ||||| | || | | |||||| || ||||||||||| |
Sbjct 14524 AAGCAAGGTTGCAGACAGCAACCTCATCAGGGGCGCAGTACTCGATAATCTCGGTGCAGA 14465
Query 213553 GGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAG-AATCC 213611
| ||| || ||||||||||||||||||| ||| ||| ||||| | |||| |||
Sbjct 14464 GATTGGAGCTACGGATGGTGCCCAGGTTCTTCTGG-TTGCTCTTGCGGTTGCAGTGGTCC 14406
Query 213612 TTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGC--TCCAGA 213669
|||||||||||| ||||| |||||||| ||| | | | || | |||| |||||
Sbjct 14405 TTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGCGCCTCGAGGA--TGGCATACCAGA 14348
Query 213670 GGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGA 213729
| | | |||||| || | || | | | || ||| |||| |||||| |
Sbjct 14347 GCTTCTGGGCCTT---CATGGTCTTGCGACCCTTGCCCGCCTTCTCATACTTTTCGTAAA 14291
Query 213730 GCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGA 213789
| | | ||| || | ||| || | |||| || || || |||||||||||
Sbjct 14290 GAGCCTCGAACTCCTCGCCATAGCAGTCGGCCAGACCGGGGCACTCGTTGGGACACATGA 14231
Query 213790 GGCTCCAGTCCCCG-TCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCG 213848
|| ||||||| ||| || |||| ||| | || |||||| || || || | ||| || ||
Sbjct 14230 GGGTCCAGTCACCGTTCTTCTC-GACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCC 14172
Query 213849 GTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAG 213908
||||||||| | || | ||| ||| || ||| |||||||| || || ||
Sbjct 14171 AGGAACAGGTCGCGGGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAAC 14112
Query 213909 TCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTG 213965
||||||| || |||||||| ||||| | ||||||||||||||| || | || | |||
Sbjct 14111 TCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCAGGTCGCTTGTTG 14052
Query 213966 CCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCG 214025
|| |||||||| || || ||| ||||||||| || || | ||| | |||
Sbjct 14051 CCACCCTGGTCGACGTACCGGGCAGTGTTGTTGAAGACACGAAGCATGGGAGTGACACCG 13992
Query 214026 TTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCC---TCAGGTTGCTCATG 214082
||||| |||||||| || || || || ||||| | ||| | | ||| | | |
Sbjct 13991 TTGGAGGTACCGTTGGTACCAGCGATGTAAGAGCCAGTGGCACGGATTCGGTGG---ACG 13935
Query 214083 GAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATG 214142
|| || || ||||| || ||||||||||||||| ||| | | | ||| ||
Sbjct 13934 TTCAGGCCGATACCACCCGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAA 13875
Query 214143 ATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTG 214202
|| || | |||||||| ||| | | | | || |||||| || ||||| ||| |
Sbjct 13874 ATACCCTCAATGCTGTCCTCTTTCATATCGACCAGGAAGCATGAGGACAGCTGAGGCTGG 13815
Query 214203 GACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGC 214262
| | |||| ||||| || |||||| ||||||| | | |||||| | || | |||
Sbjct 13814 GGAGTACCAGCATTGAAGAGGGTGGGGGAGGCATGGGTGAAGAACTTGCTCGACATGAGG 13755
Query 214263 CTGTAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAG-CGCACCTCAT 214321
|||||||||||||||| || |||| ||| | || | || | |||
Sbjct 13754 TTGTAGGTCTCCAGGACACGCTCAATATCGTCACCCCAGATGCCGACAGACACA-CGCAT 13696
Query 214322 CAGCATGTGCTGGGGCCTCTCTATGGGTCCTTTGGGGCC---CTTGAGCAGGTAGGAGCG 214378
| |||||||||||| | ||| | || ||| | |||||| |||||||| ||
Sbjct 13695 GATCATGTGCTGGGGACGCTC-AACAATC--TTGCCATCAATCTTGAGGAGGTAGGATCG 13639
Query 214379 CTCCAGAGTCTTGAACCCAAAGTA 214402
||| ||||||||||| ||||||||
Sbjct 13638 CTCAAGAGTCTTGAAGCCAAAGTA 13615
>seq1098
Length=11580
Score = 206 bits (228), Expect = 5e-48
Identities = 487/729 (67%), Gaps = 11/729 (2%)
Strand=Plus/Minus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
||||||||| || || | ||||| |||||||| ||||| || | | |||||||||||
Sbjct 10307 CTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTC 10248
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957
||||||| ||||||||||| | || || ||| | || ||| | | || |
Sbjct 10247 CATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCT-TCTCGTTGCCGAGGGCGACGAGGA 10189
Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017
|| | || |||||| |||||||||| | ||||||| | ||||||||| | ||||
Sbjct 10188 GGCGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTCGGCGTTCATGCCGAGCAGGG 10129
Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077
||| | |||| || || ||||||| ||| || ||||| || | || |
Sbjct 10128 CGCAGGGGAGGGCCTCGGTCAGGAACTCCTGCTCAATGGTGACGGCATCGGTGATGATGT 10069
Query 48078 GCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAA 48137
|| | | || || || | || | | | | || | ||| | ||| ||||
Sbjct 10068 CCTGGATGACCTGCT-TGCTGGCACG--GCCCTTGAGGTGGGAGTGGAGGAGGCATGCAA 10012
Query 48138 AGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCA 48197
|||| |||| | || ||||| || ||||||| ||||||| ||| || |||||||
Sbjct 10011 AGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCCAGGCA 9952
Query 48198 TGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCT 48257
||| || | || ||||||||||| || | || || | || ||||||||| ||||
Sbjct 9951 TGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATACCCT 9892
Query 48258 CCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGG 48317
| || || || || ||| ||| | || | || || | ||||||||| ||||||
Sbjct 9891 CGACGGCAGCAAAGGCGACGAGACGCTGAGCAAAGGACGAGTTCTTGTCCTGGATCCATC 9832
Query 48318 AAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCT 48377
| |||||||| |||||||| |||||| || || ||||| ||||| |||||| |
Sbjct 9831 GGATGGCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTTGAAGAGGT 9772
Query 48378 TCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGTACATCTCAG 48434
| | | | | | ||| | ||||| | |||| ||| | ||| |||| |
Sbjct 9771 AGGTTCGTTGAGCAGGCTCCTTGATGTAGGTGTCAATGAGGAGC---GAGTAGGTCTCGG 9715
Query 48435 AGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCA 48494
|||| | ||||| || ||||||||| ||||||||| | |||||| | ||| |
Sbjct 9714 AGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGGGCCTCGGGGATCTGGA 9655
Query 48495 CTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGA 48554
| || | ||||| ||| | || ||||| ||||| || || || || ||||| ||||
Sbjct 9654 CCTCGCCGCTGAATCGCTCGACAAGGTTCTCGTTGACGATGCCGTCAGAGGCAGCGAAGA 9595
Query 48555 AGGCAAGGA 48563
|||| ||||
Sbjct 9594 AGGCGAGGA 9586
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931315147361280
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