Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20cuneirostrum_20[genbank_20GCA_5F001680505.1_202016-07-06]
18,692 sequences; 49,007,756 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq398 192 7e-44
>seq398
Length=19136
Score = 192 bits (212), Expect = 7e-44
Identities = 1042/1638 (64%), Gaps = 47/1638 (3%)
Strand=Plus/Plus
Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271
|| ||| ||||| ||||||| || | |||||||| || || || ||||| ||||
Sbjct 13681 CCCCAGCACATGATCATGCGTGTGTCTGTCGGCATCTGGGGTGACGATATTGAGCGTGTC 13740
Query 75272 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 75329
||||||| ||| || ||||| |||| | | ||| || || | || |||||||
Sbjct 13741 CTGGAGACCTACAACCTCATGTCGAGCAAGTTCT--TCACCCATGCCTCCCCCACCCTCT 13798
Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389
||||||||||||| || || ||| ||||| |||||||| ||| | || ||||
Sbjct 13799 TCAATGCTGGTACTCCCCAGCCTCAGCTGTCCTCATGCTTCCTGGTCGATATGAAAGAGG 13858
Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449
|| || | ||||| |||| ||||| | | ||||| ||||| ||| ||| |
Sbjct 13859 ACAGCATTGAGGGTATTTATGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGGCGG 13918
Query 75450 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 75509
| ||||| || || || |||| | | |||| | ||| || || || |
Sbjct 13919 GTGGTATCGGCCTGAACGTCCACCGAATCCGTGCCACTGGCTCTTACATCGCTGGTACCA 13978
Query 75510 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 75569
| ||| || | ||| | | ||| |||||||| || || ||| ||| || || || |
Sbjct 13979 ACGGTACCTCCAACGGTGTCACTCCCATGCTTCGTGTCTTCAACAACACTGCCCGGTACG 14038
Query 75570 TAAATCAAGCGGGGCGTC--GCAA--GGGGTCCATCGCGGTCTACTTGGAACCATGGCAT 75625
| | | || | ||| | || | || || | || ||||| | || || |||||
Sbjct 14039 TCGA-CCAGGGTGGCAACAAGCGACCTGGTGCCTTTGCCATCTACCTTGAGCCCTGGCAC 14097
Query 75626 GCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGT 75685
|| ||| || | ||||||||||| | || ||||| || | || |||| ||
Sbjct 14098 GCAGATGTCTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGGTCCGCGCC 14157
Query 75686 AGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGT 75745
| || || || | || |||||||| || || ||||||||||| || ||| ||
Sbjct 14158 CGCGACCTGTTCCTGGCTCTCTGGATTCCCGATCTCTTCATGAAGCGTGTCGAGAAGAAC 14217
Query 75746 GGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGAC-GCGGTGGGTGA 75804
||| | ||| | || | ||||| || || || ||||| ||||| || | || ||
Sbjct 14218 GGTGACTGGACCCTCATGTGTCCCAACGAGTGCCCCGGTCTGGCCGACTGCTAT-GGCGA 14276
Query 75805 GGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTA---GAGCCAATGCGACTGT 75861
|||||| || || || ||| ||||||||| ||| ||| | | ||| ||| |
Sbjct 14277 GGAGTTCGAGGCTCTTTACGAAAAGTATGAGAAGGCGGGCAAGGGTCGCAA---GACCAT 14333
Query 75862 ACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCAT 75920
|| | | || | | ||| | || || ||| | | ||||| ||||| || | || |
Sbjct 14334 -GAAGGCCCAGAAGCTCTGGTATGCCATCCTCGAGGCGCAGACCGAGACCGGCAACCCCT 14392
Query 75921 ATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCA 75980
||||| |||||||| || ||| ||||| ||||| ||||| |||| || |||
Sbjct 14393 TCATGCTCTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACCTGGGCACCATCC 14452
Query 75981 AGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTT 76040
||||| ||||| ||||| || ||| | |||||| | |||||| ||||| |
Sbjct 14453 GTAGCTCCAATCTCTGCACCGAGATTATCGAGTACTGCGCCCCTGATGAGGTTGCTGTCT 14512
Query 76041 GCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCA---ATGAAGAGACTCGCACTTTTG 76097
|||| | || || | ||||| || || ||| | || || || || | ||
Sbjct 14513 GCAACCTTGCTTCTCTGGCCCTGCCTTCGTTCATCAACTACGATGATGCTTGC---TATG 14569
Query 76098 ATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTG 76157
| | | || | || || ||||| || |||| || || ||| | | || |
Sbjct 14570 ACTTCCAGAAGTTGCACGACGTCACACAGGTTGTCGTTCGCAACCTGAACAGGATTATCG 14629
Query 76158 ACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTG 76217
|| || || || ||| | || || || || ||||||||| |||| ||||
Sbjct 14630 ACGTGAACCACTACCCTGTTACGGAAGCTCGCAACAGCAACATGCGACACCGACCCATTG 14689
Query 76218 GTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATT-TTGTGCCGCTACGCATTT-GATTC 76275
|| | ||||| || ||||| || |||| || || | || ||| | || ||| || ||
Sbjct 14690 GTGTTGGTGTCCAGGGTCTTGCTGATGCTTTCCTTGCTCTG-CGC-ATGCCTTTCGAGTC 14747
Query 76276 AGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGA 76335
|| || ||| | || | ||||| || ||||| || || || ||||
Sbjct 14748 TCCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGACCATCTACCATGCTGCCCTCAC 14807
Query 76336 GGCGAGTT--GTG-AATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCC 76392
|| || ||| | |||| | | | ||| |||| || || |||| |||||
Sbjct 14808 TGC---TTCGGTGCAGCTGGCCAAGGAGGAGGGTCCCTACTCCACCTTCAAGGGCTCTCC 14864
Query 76393 CGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCT--CAACTAC 76450
||| || | || | || ||||| || |||| |||| ||||| || || | ||
Sbjct 14865 CGCCTCTGAGGGTATTCTCCAGTTCGACATGT-GGAATGTGAAGCC-TTCTGACCTCTGG 14922
Query 76451 GACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATG 76510
|||||||| ||| ||| | |||||||| | || |||| |||||||| || |
Sbjct 14923 GACTGGGAGAACCTCCGGGAGCAGGTCAAGGAGCACGGCATTCGCAACAGTCTGCTGCTT 14982
Query 76511 GCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCA 76570
|| || ||||| || ||| || | || ||| |||| || || || ||||| || ||
Sbjct 14983 GCCCCTATGCCTACTGCCAGTACTTCGCAGATCCTGGGCAACAACGAGTGCTTCGAGCCT 15042
Query 76571 TACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAG 76630
||||| | |||||||||| | | | |||||| || ||||| | ||||||
Sbjct 15043 TACACCTCCAACATCTACCAGCGCCGTGTCCTCGCTGGCGAGTTCCAGGTCGTCAACCCC 15102
Query 76631 CACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATC---TC 76687
|| |||| ||||| | || || || ||||| | | ||||| | | ||
Sbjct 15103 TGGCTGCTCAAGGACCTTGTTGACATGGGCCTGTGGTCGGATGCCATGAAAAACCGAATC 15162
Query 76688 A-TGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGAA 76746
| || || | | |||||||| || || ||| | | ||||| | || |||||
Sbjct 15163 ATTGCCGAGAAC----GGTTCCATCCAGAACATCCCCAACATCCCCGCCGAGGTCAAGGC 15218
Query 76747 TCTCTACCGCACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGCAGATCG 76806
|||||| || || ||||| || | | | ||| || | ||||| || || ||
Sbjct 15219 CCTCTACAAGACCGTCTGGGAGATTTCGCAGCGCCAGGTCGTTCAGATGGCTGCCGACCG 15278
Query 76807 TGGTCGCTTCATTGATCA 76824
||| ||||||||||||
Sbjct 15279 AGGTGCCTTCATTGATCA 15296
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596430211512960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |