Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20cuneirostrum_20[genbank_20GCA_5F001680505.1_202016-07-06] 18,692 sequences; 49,007,756 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1098 188 1e-41 seq1475 141 1e-27 seq416 125 1e-22 seq398 123 4e-22 seq74 113 7e-19 seq75 91.5 2e-12 >seq1098 Length=11580 Score = 188 bits (208), Expect = 1e-41 Identities = 243/331 (73%), Gaps = 11/331 (3%) Strand=Plus/Minus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| ||||| ||| ||| | |||||| |||| ||||| ||||||||||| ||||| Sbjct 9998 ACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCCAGGCATGAGGCCACGCTT 9939 Query 794400 CTTGAGCCAAAAGATGG---CACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGC 794456 ||||||||| ||||||| || || || || ||| ||||| ||||||||||| || Sbjct 9938 CTTGAGCCAGAAGATGGAGGCAAAGGCACCGCT---GAAGAAGATACCCTCGACGGCAGC 9882 Query 794457 AAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGC 794516 |||| ||||||| |||| ||||| | | | || | | |||||| || || Sbjct 9881 AAAGGCGACGAGACGCTGAGCAAAGGA---CGAGTTCTTGTCCTGGATCCATCGGATGGC 9825 Query 794517 CCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGT-GGTCCT 794575 ||| || ||||| || | | |||| | || || |||||| ||||||| ||| | Sbjct 9824 CCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTTGAAGAGGTAGGTTCG 9765 Query 794576 TCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGT 794635 | | | || ||||||| ||||||||| |||||||||||||||||||| |||||||||| Sbjct 9764 TTGAG-CAGGCTCCTTGATGTAGGTGTCAATGAGGAGCGAGTAGGTCTCGGAGTGGATGT 9706 Query 794636 TTTCGATGGCGATCTGGAAGCCATAAAAGCA 794666 | || || |||||||||||| || ||||| Sbjct 9705 TCTCCATCATGATCTGGAAGCCGTAGAAGCA 9675 Score = 147 bits (162), Expect = 3e-29 Identities = 190/259 (73%), Gaps = 5/259 (2%) Strand=Plus/Minus Query 793892 GACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAG 793951 ||| || ||||| || || || || ||| |||||| |||||||||||||| |||| Sbjct 10319 GACACCAGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAG 10260 Query 793952 CGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAG 794011 ||||| |||||| | ||| ||||||| | | |||| ||||||| ||||| Sbjct 10259 GGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTGCCGAG 10200 Query 794012 --CGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTC 794069 ||||| || ||||||||||||||||| || |||||||| ||||||| |||||||| Sbjct 10199 GGCGACG--AGGAGGCGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTCGGCGTTC 10142 Query 794070 ATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCC 794129 ||||||| || || ||| || | |||| | | ||||| | ||| || |||||| Sbjct 10141 ATGCCGAGCAGGGCGCAGGGGAGGGCCTCGGTCAGGAACTCCTGCTCAATGGTGACGGCA 10082 Query 794130 TCGATGATGATCTGCCTGG 794148 ||| ||||||| | ||||| Sbjct 10081 TCGGTGATGATGT-CCTGG 10064 >seq1475 Length=9838 Score = 141 bits (156), Expect = 1e-27 Identities = 188/260 (72%), Gaps = 2/260 (1%) Strand=Plus/Minus Query 2019183 AAAAGAA--TCGACCTGCCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACT 2019240 ||||||| || ||||||| |||||||||||||| || |||||||||| || || ||| Sbjct 1913 AAAAGAAGGTCACCCTGCCGGCCGGCCGCCACAAGCTGGTCATCCTCGACGAAGCTGACA 1854 Query 2019241 GCCTTACGTCGGCGGCCCAGCAGGCCCTCCGATCGACCATGGAAAAGTACACCAACACGA 2019300 || | || |||| |||||||| || |||||| |||||||||| ||| ||||||||| Sbjct 1853 GCATGACCTCGGGCGCCCAGCAAGCACTCCGACGAACCATGGAAATCTACTCCAACACGA 1794 Query 2019301 CGCGGTTTGCGCTGGCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTT 2019360 | | || || | ||||||||| ||| | | ||||||| |||| || || | Sbjct 1793 CCAGATTCGCCTTTGCCTGCAACCAGTCCAACAAGATCATCGAGCCCCTACAATCGCGAT 1734 Query 2019361 GCGCCATCTTGCGCTTTGCGCGCCTCACCGACGCCCAGATCGCCGCGCGTCTGCGCGAGA 2019420 |||||||| || | | || | || || |||||| ||| ||| ||| ||| Sbjct 1733 GCGCCATCCTGAGATACGCCAAGTTGACGGATGCCCAGGTCGTGAAGCGACTGATGCAGA 1674 Query 2019421 TTATCGACGCCGAAAAGGTC 2019440 ||||||| || ||||||||| Sbjct 1673 TTATCGAGGCGGAAAAGGTC 1654 >seq416 Length=18296 Score = 125 bits (138), Expect = 1e-22 Identities = 93/109 (85%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 ||| ||||||| ||||||||||||||||| || ||| | || ||||||||||| |||||| Sbjct 11152 GCCTCCAACTATCTCGACATCAAGCCCCTTCTTGATGTCGGCTGCAAGACCGTCGCCAAC 11211 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCA 2035755 | |||||||||||||| |||||||| || || ||||| || ||||||| Sbjct 11212 ATGATCAAGGGCAAGTCTCCCGAGGAGATTCGGAAGACTTTCAACATCA 11260 >seq398 Length=19136 Score = 123 bits (136), Expect = 4e-22 Identities = 357/541 (66%), Gaps = 14/541 (3%) Strand=Plus/Minus Query 2069251 TGGTCGACGGTAAACTGGATGGCGTTGGCGGCAGGCCGGGTGCGCAGATAGTACATGCCG 2069310 ||||||||||| |||||||||| ||||||| | | || ||||| ||||||||||| Sbjct 15446 TGGTCGACGGTGAACTGGATGGGAGCAGCGGCAGCCTGCGTTCGCAGGTAGTACATGCCC 15387 Query 2069311 GTCTTGAGGCCGCGACGCCACGCGTAGGCGTGCATCGACGTGATGGACTCGGCATTCGGG 2069370 ||||| |||||| | ||| || |||||| ||||| || | | | | | Sbjct 15386 GTCTTCAGGCCGAGCTTCCAGCCGGCAAAGTGCATGCTGGTGAT---CTTGCCCATGGTG 15330 Query 2069371 ACGGCA--CA-GTAGAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGGTCGGCC 2069427 | | || || || |||||| |||||| ||| || | ||| | |||||||| Sbjct 15329 GGGTCCTTCATGTGGATGTTGAGGGACTGGGACTGATCAATGAAGGCACCTCGGTCGGCA 15270 Query 2069428 GCCATGTCGATGGTCACGCGGTTGGACACCTCCCACACGGTCTTGAACAGGGCCTTGAGA 2069487 ||||| | | | | ||| | || | |||||| ||||||||| | |||||||||| Sbjct 15269 GCCATCTGAACGACCTGGCGCTGCGAAATCTCCCAGACGGTCTTGTAGAGGGCCTTGACC 15210 Query 2069488 TGCGGCGGCACCTCGTCGTCATCAAAGCCCTGCACCGAGCCCTGCGCTGCGATGAGGCGG 2069547 | |||||| | | | || | ||| | || || | | | || |||| ||| Sbjct 15209 T-CGGCGGGGA-TGTTGGGGAT----GTTCTGGATGGAACCGTTCTCGGCAATGATTCGG 15156 Query 2069548 TCGCGAAAGTCGGGCGTCCACAGGCCGCGCGCCATCATGCGC-TCGACCAGGTGGCGGTT 2069606 | | | | || ||||||||| | | || || | | | || ||| | |||| Sbjct 15155 TTTTTCATGGCATCCGACCACAGGCC-CATGTCAACAAGGTCCTTGAGCAGCCAGGGGTT 15097 Query 2069607 GACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTGATGACCTC 2069666 ||| || || ||||| | ||| || |||||| |||||||||| ||| ||| Sbjct 15096 GACGACCTGGAACTCGCCAGCGAGGACACGGCGCTGGTAGATGTTGGAGGTGTAAGGCTC 15037 Query 2069667 GCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCACGAG 2069726 | | |||| ||||||||||||||||||| || |||| || ||||| | || | || Sbjct 15036 GAAGCACTCGTTGTTGCCCAGGATCTGCGAAGTACTGGCAGTAGGCATAGGGGCAAGCAG 14977 Query 2069727 CAGCGAGTTGCGCAGGCCGTACTGTCGCACCAGCGCCCGCAGGGCGTCCCAGTCCCAGCG 2069786 ||| |||||| | ||||| || ||| || |||| ||| |||||||||||| | Sbjct 14976 CAGACTGTTGCGAATGCCGTGCTCCTTGACCTGCTCCCGGAGGTTCTCCCAGTCCCAGAG 14917 Query 2069787 G 2069787 | Sbjct 14916 G 14916 Score = 96.9 bits (106), Expect = 5e-14 Identities = 321/501 (64%), Gaps = 15/501 (3%) Strand=Plus/Minus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 ||||||||| || || || |||| ||| ||||| || |||||||| | |||||||| Sbjct 14046 CTGGTCGACGTACCGGGCAGTGTTGTTGAAGACACGAAGCATGGGAGTGACACCGTTGGA 13987 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 |||||||| || || | ||| | ||| | ||| || | ||| || | ||| Sbjct 13986 GGTACCGTTGGTACCAGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGACGTTCAGGCC 13927 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 ||| || || ||| ||||||||| | || || | || || || || || || ||||| Sbjct 13926 GATACCACCCGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAAATACCCTC 13867 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 || ||| | ||||| || | ||| ||||| || || || || | | || || Sbjct 13866 AATGCTGTCCTCTTTCATATCGACCAGGAAGCATGAGGACAGCTGAGGCTGGGGAGTACC 13807 Query 2073780 GGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATGGCCTCGTAGGT 2073839 ||||||||||| ||||| | || ||| | ||| |||||| | |||||| Sbjct 13806 AGCATTGAAGAGGGTGGGGGAGGCATGGGTGAAGAACTTGCTCGACATGAGGTTGTAGGT 13747 Query 2073840 GGCGAGCACGCGCGCCAGCGCGTCTTGGACGTCGGCAAACCCATAGTGGCCGATGGCGAC 2073899 | || || ||| | | |||| |||| || ||||| | || Sbjct 13746 CTCCAGGACACGCTCAATATCGTC--------------ACCC-CAGATGCCGACAGACAC 13702 Query 2073900 GCGCATGATCATGTACTGGGGTCGCTCGACGACGGCGTCGCGCACCTTGGTCAGGTAGGA 2073959 ||||||||||||| |||||| ||||| || | | | | |||| |||||||| Sbjct 13701 ACGCATGATCATGTGCTGGGGACGCTCAACAATCTTGCCATCAATCTTGAGGAGGTAGGA 13642 Query 2073960 CCGACGCAGGGTCGCCAGGCCAAAGTACGAGTAGGCCAGGTCGCGCTCGTGGCGGATGGC 2074019 || || ||| | |||||||||| ||| | ||| || || | | ||||| Sbjct 13641 TCGCTCAAGAGTCTTGAAGCCAAAGTACTGGTATTGGAAGTCACGGTCATAGACAATGGC 13582 Query 2074020 GGCGTCGAGGGCCTCCTTGTG 2074040 | ||| || |||||||||| Sbjct 13581 CGAGTCTAGCTCCTCCTTGTG 13561 Score = 96.9 bits (106), Expect = 5e-14 Identities = 281/433 (65%), Gaps = 8/433 (2%) Strand=Plus/Minus Query 2071584 CTCGGTGCACAGGTTGGCCGACATCG-TGGTGCCCAGGTTCTGCTGGTTGCTGGTCAGGT 2071642 ||||||||| || |||| | | | ||||||||||||||| ||||||||| | ||| Sbjct 14475 CTCGGTGCAGAGATTGGA-GCTACGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGT 14417 Query 2071643 TGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGCCGTGACGATGG 2071702 || | |||||||| |||||| |||| || |||||| |||||||| || ||||| Sbjct 14416 TGCAGTGGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGCGCCTCGAGGATGG 14357 Query 2071703 CCGACCAAATTTGGCGCGCGGGCACCGAGGTCCT-CGCGCG--GCCCTNNNNNNNNNNNN 2071759 | |||| | | | || || |||| | || | |||| Sbjct 14356 CATACCAGAGCTTCTGGGCCTTCAT---GGTCTTGCGACCCTTGCCCGCCTTCTCATACT 14300 Query 2071760 NNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGCGCCTCGGACG 2071819 | || || || || | |||| | ||| ||| ||| ||||| |||| | Sbjct 14299 TTTCGTAAAGAGCCTCGAACTCCTCGCCATAGCAGTCGGCCAGACCGGGGCACTCGTTGG 14240 Query 2071820 GGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGGTCGCACGTCC 2071879 | || | ||| | |||||| ||| || | || || ||| || || ||| ||| Sbjct 14239 GACACATGAGGGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGATCGGGAATCC 14180 Query 2071880 ACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAGGT 2071939 | || | || || ||||| || ||| ||||||||||||||||||||| ||||| Sbjct 14179 AGAGAGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGT 14120 Query 2071940 CGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTGC 2071999 | || | || | || || |||||||| ||||| |||||| ||||||||| || | Sbjct 14119 CAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCAGGTC 14060 Query 2072000 GCTTGCCGCCGCC 2072012 ||||| ||| || Sbjct 14059 GCTTGTTGCCACC 14047 >seq74 Length=35646 Score = 113 bits (124), Expect = 7e-19 Identities = 80/92 (87%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 ||||||||||||||||||||||||||| |||||||||||| |||| || || ||| | | Sbjct 880 GTACTTGGTGACGGCCTTGGTACCCTCAGAGACGGCGTGCTTGGCAAGCTCACCGGGGAG 821 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGG 1485562 ||||||||| || | |||||||||||| |||| Sbjct 820 GATCAGGCGGACAGAGGTCTGGATCTCTCGGG 789 >seq75 Length=34143 Score = 91.5 bits (100), Expect = 2e-12 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 429633 ACCTTCCGGCTCAACCTGGCCGTGACGGGCACCTACAACGCCGACTTTGACGGCGACGAG 429692 |||||||| || |||||| |||| || ||||||||||||| || || || |||||| Sbjct 29937 ACCTTCCGTCTGAACCTGTCCGTCACATCTCCCTACAACGCCGATTTCGATGGTGACGAG 29996 Query 429693 ATGAACCTGCACGTGCCCCAGTCGGAGATGGCACGCGCCGAAGTC 429737 |||||||||||||| |||||| ||| | | ||||| |||||| Sbjct 29997 ATGAACCTGCACGTTCCCCAGAGCGAGGAGACTCGCGCTGAAGTC 30041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7914258046705788