Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20cuneirostrum_20[genbank_20GCA_5F001680505.1_202016-07-06]
18,692 sequences; 49,007,756 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq1098 188 1e-41
seq1475 141 1e-27
seq416 125 1e-22
seq398 123 4e-22
seq74 113 7e-19
seq75 91.5 2e-12
>seq1098
Length=11580
Score = 188 bits (208), Expect = 1e-41
Identities = 243/331 (73%), Gaps = 11/331 (3%)
Strand=Plus/Minus
Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399
||| ||||| ||| ||| | |||||| |||| ||||| ||||||||||| |||||
Sbjct 9998 ACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCCAGGCATGAGGCCACGCTT 9939
Query 794400 CTTGAGCCAAAAGATGG---CACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGC 794456
||||||||| ||||||| || || || || ||| ||||| ||||||||||| ||
Sbjct 9938 CTTGAGCCAGAAGATGGAGGCAAAGGCACCGCT---GAAGAAGATACCCTCGACGGCAGC 9882
Query 794457 AAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGC 794516
|||| ||||||| |||| ||||| | | | || | | |||||| || ||
Sbjct 9881 AAAGGCGACGAGACGCTGAGCAAAGGA---CGAGTTCTTGTCCTGGATCCATCGGATGGC 9825
Query 794517 CCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGT-GGTCCT 794575
||| || ||||| || | | |||| | || || |||||| ||||||| ||| |
Sbjct 9824 CCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTTGAAGAGGTAGGTTCG 9765
Query 794576 TCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGT 794635
| | | || ||||||| ||||||||| |||||||||||||||||||| ||||||||||
Sbjct 9764 TTGAG-CAGGCTCCTTGATGTAGGTGTCAATGAGGAGCGAGTAGGTCTCGGAGTGGATGT 9706
Query 794636 TTTCGATGGCGATCTGGAAGCCATAAAAGCA 794666
| || || |||||||||||| || |||||
Sbjct 9705 TCTCCATCATGATCTGGAAGCCGTAGAAGCA 9675
Score = 147 bits (162), Expect = 3e-29
Identities = 190/259 (73%), Gaps = 5/259 (2%)
Strand=Plus/Minus
Query 793892 GACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAG 793951
||| || ||||| || || || || ||| |||||| |||||||||||||| ||||
Sbjct 10319 GACACCAGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAG 10260
Query 793952 CGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAG 794011
||||| |||||| | ||| ||||||| | | |||| ||||||| |||||
Sbjct 10259 GGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTGCCGAG 10200
Query 794012 --CGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTC 794069
||||| || ||||||||||||||||| || |||||||| ||||||| ||||||||
Sbjct 10199 GGCGACG--AGGAGGCGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTCGGCGTTC 10142
Query 794070 ATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCC 794129
||||||| || || ||| || | |||| | | ||||| | ||| || ||||||
Sbjct 10141 ATGCCGAGCAGGGCGCAGGGGAGGGCCTCGGTCAGGAACTCCTGCTCAATGGTGACGGCA 10082
Query 794130 TCGATGATGATCTGCCTGG 794148
||| ||||||| | |||||
Sbjct 10081 TCGGTGATGATGT-CCTGG 10064
>seq1475
Length=9838
Score = 141 bits (156), Expect = 1e-27
Identities = 188/260 (72%), Gaps = 2/260 (1%)
Strand=Plus/Minus
Query 2019183 AAAAGAA--TCGACCTGCCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACT 2019240
||||||| || ||||||| |||||||||||||| || |||||||||| || || |||
Sbjct 1913 AAAAGAAGGTCACCCTGCCGGCCGGCCGCCACAAGCTGGTCATCCTCGACGAAGCTGACA 1854
Query 2019241 GCCTTACGTCGGCGGCCCAGCAGGCCCTCCGATCGACCATGGAAAAGTACACCAACACGA 2019300
|| | || |||| |||||||| || |||||| |||||||||| ||| |||||||||
Sbjct 1853 GCATGACCTCGGGCGCCCAGCAAGCACTCCGACGAACCATGGAAATCTACTCCAACACGA 1794
Query 2019301 CGCGGTTTGCGCTGGCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTT 2019360
| | || || | ||||||||| ||| | | ||||||| |||| || || |
Sbjct 1793 CCAGATTCGCCTTTGCCTGCAACCAGTCCAACAAGATCATCGAGCCCCTACAATCGCGAT 1734
Query 2019361 GCGCCATCTTGCGCTTTGCGCGCCTCACCGACGCCCAGATCGCCGCGCGTCTGCGCGAGA 2019420
|||||||| || | | || | || || |||||| ||| ||| ||| |||
Sbjct 1733 GCGCCATCCTGAGATACGCCAAGTTGACGGATGCCCAGGTCGTGAAGCGACTGATGCAGA 1674
Query 2019421 TTATCGACGCCGAAAAGGTC 2019440
||||||| || |||||||||
Sbjct 1673 TTATCGAGGCGGAAAAGGTC 1654
>seq416
Length=18296
Score = 125 bits (138), Expect = 1e-22
Identities = 93/109 (85%), Gaps = 0/109 (0%)
Strand=Plus/Plus
Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706
||| ||||||| ||||||||||||||||| || ||| | || ||||||||||| ||||||
Sbjct 11152 GCCTCCAACTATCTCGACATCAAGCCCCTTCTTGATGTCGGCTGCAAGACCGTCGCCAAC 11211
Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCA 2035755
| |||||||||||||| |||||||| || || ||||| || |||||||
Sbjct 11212 ATGATCAAGGGCAAGTCTCCCGAGGAGATTCGGAAGACTTTCAACATCA 11260
>seq398
Length=19136
Score = 123 bits (136), Expect = 4e-22
Identities = 357/541 (66%), Gaps = 14/541 (3%)
Strand=Plus/Minus
Query 2069251 TGGTCGACGGTAAACTGGATGGCGTTGGCGGCAGGCCGGGTGCGCAGATAGTACATGCCG 2069310
||||||||||| |||||||||| ||||||| | | || ||||| |||||||||||
Sbjct 15446 TGGTCGACGGTGAACTGGATGGGAGCAGCGGCAGCCTGCGTTCGCAGGTAGTACATGCCC 15387
Query 2069311 GTCTTGAGGCCGCGACGCCACGCGTAGGCGTGCATCGACGTGATGGACTCGGCATTCGGG 2069370
||||| |||||| | ||| || |||||| ||||| || | | | | |
Sbjct 15386 GTCTTCAGGCCGAGCTTCCAGCCGGCAAAGTGCATGCTGGTGAT---CTTGCCCATGGTG 15330
Query 2069371 ACGGCA--CA-GTAGAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGGTCGGCC 2069427
| | || || || |||||| |||||| ||| || | ||| | ||||||||
Sbjct 15329 GGGTCCTTCATGTGGATGTTGAGGGACTGGGACTGATCAATGAAGGCACCTCGGTCGGCA 15270
Query 2069428 GCCATGTCGATGGTCACGCGGTTGGACACCTCCCACACGGTCTTGAACAGGGCCTTGAGA 2069487
||||| | | | | ||| | || | |||||| ||||||||| | ||||||||||
Sbjct 15269 GCCATCTGAACGACCTGGCGCTGCGAAATCTCCCAGACGGTCTTGTAGAGGGCCTTGACC 15210
Query 2069488 TGCGGCGGCACCTCGTCGTCATCAAAGCCCTGCACCGAGCCCTGCGCTGCGATGAGGCGG 2069547
| |||||| | | | || | ||| | || || | | | || |||| |||
Sbjct 15209 T-CGGCGGGGA-TGTTGGGGAT----GTTCTGGATGGAACCGTTCTCGGCAATGATTCGG 15156
Query 2069548 TCGCGAAAGTCGGGCGTCCACAGGCCGCGCGCCATCATGCGC-TCGACCAGGTGGCGGTT 2069606
| | | | || ||||||||| | | || || | | | || ||| | ||||
Sbjct 15155 TTTTTCATGGCATCCGACCACAGGCC-CATGTCAACAAGGTCCTTGAGCAGCCAGGGGTT 15097
Query 2069607 GACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTGATGACCTC 2069666
||| || || ||||| | ||| || |||||| |||||||||| ||| |||
Sbjct 15096 GACGACCTGGAACTCGCCAGCGAGGACACGGCGCTGGTAGATGTTGGAGGTGTAAGGCTC 15037
Query 2069667 GCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCACGAG 2069726
| | |||| ||||||||||||||||||| || |||| || ||||| | || | ||
Sbjct 15036 GAAGCACTCGTTGTTGCCCAGGATCTGCGAAGTACTGGCAGTAGGCATAGGGGCAAGCAG 14977
Query 2069727 CAGCGAGTTGCGCAGGCCGTACTGTCGCACCAGCGCCCGCAGGGCGTCCCAGTCCCAGCG 2069786
||| |||||| | ||||| || ||| || |||| ||| |||||||||||| |
Sbjct 14976 CAGACTGTTGCGAATGCCGTGCTCCTTGACCTGCTCCCGGAGGTTCTCCCAGTCCCAGAG 14917
Query 2069787 G 2069787
|
Sbjct 14916 G 14916
Score = 96.9 bits (106), Expect = 5e-14
Identities = 321/501 (64%), Gaps = 15/501 (3%)
Strand=Plus/Minus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
||||||||| || || || |||| ||| ||||| || |||||||| | ||||||||
Sbjct 14046 CTGGTCGACGTACCGGGCAGTGTTGTTGAAGACACGAAGCATGGGAGTGACACCGTTGGA 13987
Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659
|||||||| || || | ||| | ||| | ||| || | ||| || | |||
Sbjct 13986 GGTACCGTTGGTACCAGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGACGTTCAGGCC 13927
Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719
||| || || ||| ||||||||| | || || | || || || || || || |||||
Sbjct 13926 GATACCACCCGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAAATACCCTC 13867
Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779
|| ||| | ||||| || | ||| ||||| || || || || | | || ||
Sbjct 13866 AATGCTGTCCTCTTTCATATCGACCAGGAAGCATGAGGACAGCTGAGGCTGGGGAGTACC 13807
Query 2073780 GGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATGGCCTCGTAGGT 2073839
||||||||||| ||||| | || ||| | ||| |||||| | ||||||
Sbjct 13806 AGCATTGAAGAGGGTGGGGGAGGCATGGGTGAAGAACTTGCTCGACATGAGGTTGTAGGT 13747
Query 2073840 GGCGAGCACGCGCGCCAGCGCGTCTTGGACGTCGGCAAACCCATAGTGGCCGATGGCGAC 2073899
| || || ||| | | |||| |||| || ||||| | ||
Sbjct 13746 CTCCAGGACACGCTCAATATCGTC--------------ACCC-CAGATGCCGACAGACAC 13702
Query 2073900 GCGCATGATCATGTACTGGGGTCGCTCGACGACGGCGTCGCGCACCTTGGTCAGGTAGGA 2073959
||||||||||||| |||||| ||||| || | | | | |||| ||||||||
Sbjct 13701 ACGCATGATCATGTGCTGGGGACGCTCAACAATCTTGCCATCAATCTTGAGGAGGTAGGA 13642
Query 2073960 CCGACGCAGGGTCGCCAGGCCAAAGTACGAGTAGGCCAGGTCGCGCTCGTGGCGGATGGC 2074019
|| || ||| | |||||||||| ||| | ||| || || | | |||||
Sbjct 13641 TCGCTCAAGAGTCTTGAAGCCAAAGTACTGGTATTGGAAGTCACGGTCATAGACAATGGC 13582
Query 2074020 GGCGTCGAGGGCCTCCTTGTG 2074040
| ||| || ||||||||||
Sbjct 13581 CGAGTCTAGCTCCTCCTTGTG 13561
Score = 96.9 bits (106), Expect = 5e-14
Identities = 281/433 (65%), Gaps = 8/433 (2%)
Strand=Plus/Minus
Query 2071584 CTCGGTGCACAGGTTGGCCGACATCG-TGGTGCCCAGGTTCTGCTGGTTGCTGGTCAGGT 2071642
||||||||| || |||| | | | ||||||||||||||| ||||||||| | |||
Sbjct 14475 CTCGGTGCAGAGATTGGA-GCTACGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGT 14417
Query 2071643 TGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGCCGTGACGATGG 2071702
|| | |||||||| |||||| |||| || |||||| |||||||| || |||||
Sbjct 14416 TGCAGTGGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGCGCCTCGAGGATGG 14357
Query 2071703 CCGACCAAATTTGGCGCGCGGGCACCGAGGTCCT-CGCGCG--GCCCTNNNNNNNNNNNN 2071759
| |||| | | | || || |||| | || | ||||
Sbjct 14356 CATACCAGAGCTTCTGGGCCTTCAT---GGTCTTGCGACCCTTGCCCGCCTTCTCATACT 14300
Query 2071760 NNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGCGCCTCGGACG 2071819
| || || || || | |||| | ||| ||| ||| ||||| |||| |
Sbjct 14299 TTTCGTAAAGAGCCTCGAACTCCTCGCCATAGCAGTCGGCCAGACCGGGGCACTCGTTGG 14240
Query 2071820 GGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGGTCGCACGTCC 2071879
| || | ||| | |||||| ||| || | || || ||| || || ||| |||
Sbjct 14239 GACACATGAGGGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGATCGGGAATCC 14180
Query 2071880 ACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAGGT 2071939
| || | || || ||||| || ||| ||||||||||||||||||||| |||||
Sbjct 14179 AGAGAGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGT 14120
Query 2071940 CGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTGC 2071999
| || | || | || || |||||||| ||||| |||||| ||||||||| || |
Sbjct 14119 CAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCAGGTC 14060
Query 2072000 GCTTGCCGCCGCC 2072012
||||| ||| ||
Sbjct 14059 GCTTGTTGCCACC 14047
>seq74
Length=35646
Score = 113 bits (124), Expect = 7e-19
Identities = 80/92 (87%), Gaps = 0/92 (0%)
Strand=Plus/Minus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
||||||||||||||||||||||||||| |||||||||||| |||| || || ||| | |
Sbjct 880 GTACTTGGTGACGGCCTTGGTACCCTCAGAGACGGCGTGCTTGGCAAGCTCACCGGGGAG 821
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGG 1485562
||||||||| || | |||||||||||| ||||
Sbjct 820 GATCAGGCGGACAGAGGTCTGGATCTCTCGGG 789
>seq75
Length=34143
Score = 91.5 bits (100), Expect = 2e-12
Identities = 83/105 (79%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 429633 ACCTTCCGGCTCAACCTGGCCGTGACGGGCACCTACAACGCCGACTTTGACGGCGACGAG 429692
|||||||| || |||||| |||| || ||||||||||||| || || || ||||||
Sbjct 29937 ACCTTCCGTCTGAACCTGTCCGTCACATCTCCCTACAACGCCGATTTCGATGGTGACGAG 29996
Query 429693 ATGAACCTGCACGTGCCCCAGTCGGAGATGGCACGCGCCGAAGTC 429737
|||||||||||||| |||||| ||| | | ||||| ||||||
Sbjct 29997 ATGAACCTGCACGTTCCCCAGAGCGAGGAGACTCGCGCTGAAGTC 30041
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7914258046705788
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