Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20cuneirostrum_20[genbank_20GCA_5F001680505.1_202016-07-06]
18,692 sequences; 49,007,756 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq1492 123 5e-23
>seq1492
Length=9010
Score = 123 bits (136), Expect = 5e-23
Identities = 157/216 (73%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| ||||| | || || || || || ||||| || || || || || || | | |||
Sbjct 5270 ACGGAGAACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACC 5211
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
|||||| || || || ||||||||||| |||| || || || || || || || |||||
Sbjct 5210 GTCTTCCAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCAGGGGGGATGCCCTCCTT 5151
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
|| |||||||| | || || || ||||| ||||| | | || || |||| ||| ||
Sbjct 5150 GTCCTGAATCTTGGACTTCACGTTGTCAATGGTATCGCTCGACTCCACCTCCAGAGTGAT 5091
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || || | ||||| ||||| ||||||||
Sbjct 5090 GGTCTTTCCAGTGAGAGTCTTGACAAAGATCTGCAT 5055
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981592060976588
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |