Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20cuneirostrum_20[genbank_20GCA_5F001680505.1_202016-07-06] 18,692 sequences; 49,007,756 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq593 131 2e-25 >seq593 Length=14316 Score = 131 bits (144), Expect = 2e-25 Identities = 477/747 (64%), Gaps = 50/747 (7%) Strand=Plus/Plus Query 146802 GTGCGGGTGGTAGCCCTCGAGGGCAAAATCTTCTGCCCTGAAATCGTCTATGTCCTCCAC 146861 ||| |||| ||||||| || ||||||| || ||| | | |||| ||| | ||| | Sbjct 9669 GTGAGGGTCATAGCCCTTGATAACAAAATCCTCCGCCTTCCACCCGTCGATG-CTTCCGC 9727 Query 146862 CCGCCTCAA----AATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTT 146917 || ||| ||||| |||| || ||| ||||| | | | ||||| | | Sbjct 9728 CCTTCTCTCGAGTAATCTCCAGCTCTGGAAAGTCACGGGGCTCGCGCTCAAGCTGCGTGT 9787 Query 146918 TCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCC 146977 | || | |||||||||| ||||||||||||||| || |||| | ||| | | | Sbjct 9788 TGAGAGCATCCACGTGGTCGAGGTAGACGTGCGCATCGCCCATGACGTGAGTGAGGCTGC 9847 Query 146978 CCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGT 147037 | ||| | || ||||| |||| ||||| || ||||| | ||||||||| |||| Sbjct 9848 CAGGCACCAATTCGCAGACGTGCGCCATCATGTGTGTCAGCAGTGCGTAGCTGGCAATGT 9907 Query 147038 TGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCT--C 147095 |||| ||||| || || |||||||| | || | |||||| |||||||| || | | Sbjct 9908 TGAACGGGACGCCGAGACCCATGTCGCAGGATCGCTGGTAGAGCTGGCAGTGCAGGTGGC 9967 Query 147096 CC-------------------CGTCGGCC------------------ACGTAAAACTGGC 147118 || ||||| || ||||| |||||| Sbjct 9968 CCTGAGGCTTGGCATCTGGCTCGTCGTCCTTTCGTCGAGGGTAGGAGACGTAGAACTGGG 10027 Query 147119 ACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAGA 147178 | |||||||| || || || |||| ||| || |||||||||||||| || | Sbjct 10028 CAAACATGTGGCATGGGGGGAGGACCATTTTCTTCAGATCGGCGGGGTTCCAGGCGGAAA 10087 Query 147179 CCACCAGCCGCCTGCTC-TCGGGGTTCCTCTTAATCTCTTCGATAACCCACCTCAGCTGG 147237 | ||| || | | || | ||||| | | || | |||| | |||||| Sbjct 10088 GAATCAGACGGC-GATCGTACGGGTTGGTGCGCAGCTTGTGAATAATCTCGGCGAGCTGG 10146 Query 147238 TCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCCCCAAAGTGCCTC 147297 || ||||||| |||| ||||| ||| | || |||||| ||| |||||||| | | Sbjct 10147 TCGACGCCCTTGCCCGTGTAGTCCGTCTTGGCATCAACGTACTCGGCGCCAAAGTGTCGC 10206 Query 147298 CACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCCCGCCCGC 147357 || |||||||||||||| || || || |||||| || | ||| || ||| Sbjct 10207 CATTGGAAGCCGTACACGGGGCCGAGATCGCCGACCTCGCGGTGGTTGAGGCCGAGGTTG 10266 Query 147358 TTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCC--CTTGGCGGAGAGCT 147415 | ||| |||||| |||| || | | |||||||||| | || | | || ||| ||| Sbjct 10267 TCGAGGAACTCGCGGGAGCCATTGCCGTCCCAGATCTTGATGCCGGCCTCGCTGAG-GCT 10325 Query 147416 CCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACCCCCCTCCAAA 147475 | ||| ||| |||| |||||||||||| ||||| | | || | | | Sbjct 10326 -GGTGGAGGATGTGTTGCCCTCGATGAACCAGAGGAGCTCGGCGATGACGGCGCGGGTGA 10384 Query 147476 AGACCCTCTTGGTGGTCAGCAGGGGGA 147502 |||| | ||||||||| || ||||||| Sbjct 10385 AGACGCGCTTGGTGGTGAGGAGGGGGA 10411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583351668028800