Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20cuneirostrum_20[genbank_20GCA_5F001680505.1_202016-07-06]
18,692 sequences; 49,007,756 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq1098 226 4e-53
seq398 123 4e-22
seq1475 95.1 2e-13
>seq1098
Length=11580
Score = 226 bits (250), Expect = 4e-53
Identities = 405/572 (71%), Gaps = 31/572 (5%)
Strand=Plus/Plus
Query 1455765 GCTACCAGCGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAG 1455824
|| |||| | ||| ||| | |||||| || |||||||||||||| || ||||| ||||||
Sbjct 9452 GCAACCA-CAGATCTGGCAGATGTAC-AAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAG 9509
Query 1455825 GAGGTCGACCTCGGCGCCGA----CACGGTCCACTGGGTGT--CGC-TGAGCGACGACGA 1455877
||| | || || | || |||| ||||| ||| ||| | ||||||
Sbjct 9510 GAGATTGATCTATCCAAGGATCTCCACG----ACTGGAACAACCGCCTGACTGCCGACGA 9565
Query 1455878 GCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCG 1455937
|| ||| || ||| |||||||||| || ||| ||| || |||||||| ||
Sbjct 9566 GCAGTTCTTCGTCTCCCACATCCTCGCCTTCTT-CGCTGCCTCTGACGGCATCGTCAACG 9624
Query 1455938 AGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACG 1455997
||||||| | || || || | |||||||| | || ||||| || | || ||||
Sbjct 9625 AGAACCTTGTCGAGCGATTCAGCGGCGAGGTCCAGATCCCCGAGGCCCGATGCTTCTACG 9684
Query 1455998 GGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCT 1456057
| ||||||||| || || ||||||||||| || |||||||||||||| || |||||||
Sbjct 9685 GCTTCCAGATCATGATGGAGAACATCCACTCCGAGACCTACTCGCTCCTCATTGACACCT 9744
Query 1456058 ACGTCAAGGACCCGGTCGAGAAGGACC-ACCTCTTTCGCGCCATCGACACGGTGCCGTCG 1456116
|| ||||||| || | | | | ||| ||||||| |||||| || || | || |
Sbjct 9745 ACATCAAGGAGCCTG-CTCAACGAACCTACCTCTTCAACGCCATTGAGACCATCCCCTGC 9803
Query 1456117 GTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATC---AACAAGGAGGGCCTCGACACT 1456173
| | || |||||||||||||| || |||||| ||||| | |||| | ||
Sbjct 9804 ATCCGCAAGAAGGCCGACTGGGCCATCCGATGGATCCAGGACAAGAA----CTCGTC-CT 9858
Query 1456174 TTGCCGAGCGGCTCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTC-TCGG-GCAGTTT 1456230
|||| |||| ||||||| |||||| | ||||||||| ||||| ||| ||| || ||
Sbjct 9859 TTGCTCAGCGTCTCGTCGCCTTTGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTTG 9918
Query 1456231 CTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACG 1456290
| | ||||||| |||||||||||||| ||||||||||| || | | |||| |||||
Sbjct 9919 C--CTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGG-CCTGACCTTTTCCAACG 9975
Query 1456291 AATTTATCAGTCGCGACGA-AGTTTTCACCCC 1456321
| | ||| ||| ||||| || ||||| ||
Sbjct 9976 AGCTCATCTCTCGTGACGAGGGTCTTCACACC 10007
Score = 116 bits (128), Expect = 5e-20
Identities = 180/252 (71%), Gaps = 4/252 (2%)
Strand=Plus/Plus
Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582
|||||| ||| |||||| || ||| | ||||| | | |||| | || || ||
Sbjct 10071 ATCATCACCGATGCCGTCACCATTGAGCAGGAGTTCCTGACCGAGGCCCTCCCCTGCGCC 10130
Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642
|| |||||||||||||| | |||||| |||||||| || || |||||||||||||
Sbjct 10131 CTGCTCGGCATGAACGCCGAC-CTCATGAAGCAGTACATCGAGTTC-GTCGCCGACCGCC 10188
Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702
| |||| || |||||| || ||||| |||| | | ||||||| ||| | |||
Sbjct 10189 TCCTCGTCGCCCTCGGCAACG-AGAAGGTCTACAAGGCCACCAACCCCTTCGACTTCATG 10247
Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGCC 1456761
||| ||||| |||| |||||||||||||| |||||| || || || || |||
Sbjct 10248 GAGAACATCTCCCTCGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCAG 10307
Query 1456762 AAGGCCGGCGTC 1456773
||||| || |||
Sbjct 10308 AAGGCTGGTGTC 10319
>seq398
Length=19136
Score = 123 bits (136), Expect = 4e-22
Identities = 336/506 (66%), Gaps = 25/506 (5%)
Strand=Plus/Plus
Query 259682 CACAAGGAGGTCCTCGACGCTGCCATCTGCCACGGCCGAGACTTTGGCTACTCGTACTTT 259741
|||||||||| || ||| | ||||| | | | ||| ||||| ||| |||||||
Sbjct 13561 CACAAGGAGGAGCTAGACTCGGCCATTGTCTATGACCGTGACTTCCAATACCAGTACTTT 13620
Query 259742 GGTCTGGCGAC-CTTGCGCCGGTCCTACCTGACCAA-AGTGC--GCGATATTGTCGTCGA 259797
|| | ||| |||| || | |||||||| ||| | || || | ||||| | |
Sbjct 13621 GGCTTCAAGACTCTTGAGC-GATCCTACCTCCTCAAGATTGATGGCAAGATTGTTG---A 13676
Query 259798 GCGGCCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCCGACGTCGA 259857
||| |||||| | ||| |||||||||| | | ||| | |||| | ||
Sbjct 13677 GCGTCCCCAGCACATGATCATGCGTGTGTCTGTCGGCA--TCTGGGGT----------GA 13724
Query 259858 CAATGCGCTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCA-GTTGTTCACCT 259916
| || | |||| || || | |||||| | ||||||| |||| ||| ||||||
Sbjct 13725 CGATA---TTGAGCGTGTCCTGGAGACCTACAACCTCATGTCG-AGCAAGTTCTTCACCC 13780
Query 259917 CAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTC 259976
|| | ||||| ||||| ||||| || || || | || ||| || || ||||| |
Sbjct 13781 ATGCCTCCCCCACCCTCTTCAATGCTGGTACTCCCCAGCCTCAGCTGTCCTCATGCTTCC 13840
Query 259977 TGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGC 260036
|| | || ||||| | || || ||||| || ||||| || |||||| || ||
Sbjct 13841 TGGTCGATATGAAAGAGGACAGCATTGAGGGTATTTATGATACTCTCAAGACCTGTGCCA 13900
Query 260037 TCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCG 260096
| ||||||||| ||| || || ||||| | || ||| | || ||| | |||
Sbjct 13901 TGATCTCCAAGATGGCGGGTGGTATCGGCCTGAACGTCCACCGAATCCGTGCCACTGGCT 13960
Query 260097 CCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTA 260156
| ||| | || || |||||||| |||||||| | ||||||||||| || || |
Sbjct 13961 CTTACATCGCTGGTACCAACGGTACCTCCAACGGTGTCACTCCCATGCTTCGTGTCTTCA 14020
Query 260157 ACGACACGGCGCGCTACGTCGACCAG 260182
|| |||| || || ||||||||||||
Sbjct 14021 ACAACACTGCCCGGTACGTCGACCAG 14046
Score = 96.9 bits (106), Expect = 5e-14
Identities = 108/142 (76%), Gaps = 2/142 (1%)
Strand=Plus/Plus
Query 262092 AGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTACA 262151
|| |||||| ||||| ||| ||| || | ||||||||||| |||| |||| ||||||
Sbjct 14345 AGCTCTGGTATGCCATCCTCGAGGCGCAGACCGAGACCGGCAACCCCTTCATGCTCTACA 14404
Query 262152 AGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA-CGACAGAGGCCAAC 262210
||||| | ||||| | ||||||||| ||||||||||||||| | || ||||
Sbjct 14405 AGGACCACTGCAACCGCAAGAGCAACCAGAAGAACCTGGGCACCATCCGTAG-CTCCAAT 14463
Query 262211 CTGTGCACCGAGATCGTCCAGT 262232
|| ||||||||||| || |||
Sbjct 14464 CTCTGCACCGAGATTATCGAGT 14485
>seq1475
Length=9838
Score = 95.1 bits (104), Expect = 2e-13
Identities = 127/177 (72%), Gaps = 0/177 (0%)
Strand=Plus/Plus
Query 332878 CAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCATTGACGACGTGTTGCAGGCCAG 332937
||||||||| || || || |||| |||||||| | | ||| ||||||||| |
Sbjct 1723 CAGGATGGCGCATCGCGATTGTAGGGGCTCGATGATCTTGTTGGACTGGTTGCAGGCAAA 1782
Query 332938 GGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGTCGACCGGAGGGCCTGTTGGGCCGC 332997
||| || | ||||| |||| | |||||||||| ||||| || || ||||| |
Sbjct 1783 GGCGAATCTGGTCGTGTTGGAGTAGATTTCCATGGTTCGTCGGAGTGCTTGCTGGGCGCC 1842
Query 332998 CGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCTTGTGGCGCCCGTGCGGCAG 333054
|| || | || ||| || ||||||||||||| | ||||||||| ||| ||||||
Sbjct 1843 CGAGGTCATGCTGTCAGCTTCGTCGAGGATGACCAGCTTGTGGCGGCCGGCCGGCAG 1899
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7176008322244104
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |