Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20cuneirostrum_20[genbank_20GCA_5F001680505.1_202016-07-06]
18,692 sequences; 49,007,756 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq398 125 1e-23
>seq398
Length=19136
Score = 125 bits (138), Expect = 1e-23
Identities = 629/988 (64%), Gaps = 32/988 (3%)
Strand=Plus/Minus
Query 69267 CAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCA-TATTGTATTA 69325
||| || | ||| || || || || || || ||||||| || ||| || | || |
Sbjct 14535 CAGGGCCAGAGAAGCAAGGTTGCAGACAGCAACCTCATCAGGGGC-GCAGTACTCGATAA 14477
Query 69326 TCTCTGTACATAGATTA---CTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTT 69382
|||| || || ||||| |||| ||| || ||||| || | ||| || |||||
Sbjct 14476 TCTCGGTGCAGAGATTGGAGCTACG---GATGGTGCCCAGGTTCTTCTGGTTGCTCTTGC 14420
Query 69383 TGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAA 69442
||| ||| ||||||||| || || || || | || || || |||| | |||| |
Sbjct 14419 GGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGCGCCTCGAGGA 14360
Query 69443 TAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTAACGCTT---CTCTTTTTCAT 69499
| | | ||| | | || || || ||||||| || ||| | | || ||||
Sbjct 14359 TGGCATACCAGAGCTTCTGGGCCTTCAT---GGTCTTGCGACCCTTGCCCGCCTTCTCAT 14303
Query 69500 ATTGT--GTATATAGCCGTTCGAATTCATCTCCCCAAA-CA-TCATCCAATCCAGGACAT 69555
| | | ||| | |||| ||||| || ||| ||| | || || ||| || || ||
Sbjct 14302 ACTTTTCGTAAAGAGCC--TCGAACTC--CTCGCCATAGCAGTCGGCCAGACCGGGGCAC 14247
Query 69556 TCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCG 69615
|| || |||||||| | | ||| || | | | || || || ||||| || ||||||
Sbjct 14246 TCGTTGGGACACATGAGGGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGATCG 14187
Query 69616 GGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAtttttt 69675
|||||||| ||||| | || || || | || | || || || || || ||
Sbjct 14186 GGAATCCAGAGAGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTGCCGTGGTTCTTG 14127
Query 69676 ttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACT 69735
|| || || ||||| | | ||| | ||||| || || || || || || | | |
Sbjct 14126 CGCAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCA 14067
Query 69736 CCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGC 69795
|| ||||| || || || ||||| || | ||| | ||||||||| || |||| | |||
Sbjct 14066 CCAGGTCGCTTGTTGCCACCCTGGTCGACGTACCGGGCAGTGTTGTTGAAGACACGAAGC 14007
Query 69796 ATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGA 69855
|| ||| | | ||| || || |||| || || |||| || ||| || | || ||
Sbjct 14006 ATGGGAGTGACACCGTTGGAGGTACCGTTGGTACCAGCGATGTAAGAGCCAGTGGCACGG 13947
Query 69856 ATATTACTAATAGAT-AGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTT 69914
|| | | | | || || || || || ||||| || ||||| | ||||| ||
Sbjct 13946 AT-TCGGTGGACGTTCAGGCCGATACCACCCGCCATCTTGGAGATCATGGCACAGGTCTT 13888
Query 69915 CAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGA 69974
| || ||||| |||||||| ||||| || ||| |||| | | || || || ||
Sbjct 13887 GAGAGTATCATAAATACCCTCAATGCTGTCCTCTTTCATATCGACCAGGAAGCATGAGGA 13828
Query 69975 CATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTT 70034
|| ||| | || ||| || ||||| || | || || || || || ||||| | ||
Sbjct 13827 CAGCTGAGGCTGGGGAGTACCAGCATTGAAGAGGGTGGGGGAGGCATGGGTGAAGAACTT 13768
Query 70035 TTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATC----CCACTGATGAATTC 70090
|| | || ||||| || || | | || ||||| || | |||| |
Sbjct 13767 GCTCGACATGAGGTTGTAGGTCTCCAGGACACGCTCAATATCGTCACCCCAGATG----C 13712
Query 70091 CTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCA 70150
| | | |||||||| | ||| ||||| || || || || | || || || || |
Sbjct 13711 CGACAGACACACGCATGATCATGTGCTGGGGACGCTCAACAATCTTGCCATCAATCTTGA 13652
Query 70151 ACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGT 70210
||||| ||| || ||||| || || ||||| || | |||| ||||| | || |
Sbjct 13651 GGAGGTAGGATCGCTCAAGAGTCTTGAAGCCAAAGTACTGGTATTGGAAGTCACGGTCAT 13592
Query 70211 AAATAATAACAGAATTTAGTTTATCCTT 70238
| | ||| | || | ||| | |||||
Sbjct 13591 AGACAATGGCCGAGTCTAGCTCCTCCTT 13564
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686748303758880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |