Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20cuneirostrum_20[genbank_20GCA_5F001680505.1_202016-07-06]
18,692 sequences; 49,007,756 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq398 190 3e-43
seq1098 136 5e-27
>seq398
Length=19136
Score = 190 bits (210), Expect = 3e-43
Identities = 1119/1776 (63%), Gaps = 43/1776 (2%)
Strand=Plus/Minus
Query 117805 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 117864
||||||| ||||| || |||| | ||| ||||||||||| |||||||| || |
Sbjct 15436 TGAACTGGATGGGAGCAGCGGCAGCCTGCGTTCGCAGGTAGTACATGCCCGTCTTCAGGC 15377
Query 117865 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATGA 117924
| |||||||| | | ||||| || | |||| | ||| || | ||||
Sbjct 15376 CGAGCTTCCAGCCGGCAAAGTGCATGCTGGTGATCTTGCCCATGGTGGGGTCCTTCATGT 15317
Query 117925 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCA 117984
|| ||| | ||||| ||||| |||||| || || || || ||||| | || |
Sbjct 15316 GGATGTTGAGGGACTGGGACTGATCAATGAAGGCACCTCGGTCGGCAGCCATCTGAACGA 15257
Query 117985 CATCCTTCATCTTGATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATAT 118044
| | | | || ||||| || ||| |||||||| ||| | || | ||||| |
Sbjct 15256 CCTGGCGCTGCGAAATCTCCCAGACGGTCTTGTAGAGGGCCTTGACCTCGGCGGGGATGT 15197
Query 118045 CCACGATATTTTGGATGGATCCACCCGCCTTGACCATGA---GATCCTTCATATCCTTTG 118101
||| || |||||||| ||| || | | |||| | | ||||| | | |
Sbjct 15196 TGGGGATGTTCTGGATGGA---ACCGTTCTCGGCAATGATTCGGTTTTTCATGGCATCCG 15140
Query 118102 ACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCAC 118161
|||| || || || | || |||| | || ||||| || ||||| |
Sbjct 15139 ACCACAGGCCCATGTCAACAAGGTCCTTGAGCAGCCAGGGGTTGACGACCTGGAACTCGC 15080
Query 118162 CCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTAC 118221
| |||||| || | | | ||||| |||| ||||| ||||| |||||||| ||||| |
Sbjct 15079 CAGCGAGGACACGGCGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGTTGC 15020
Query 118222 CCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGAC 118281
||| ||| || | || ||| || ||||| || || | || || ||||| || | |
Sbjct 15019 CCAGGATCTGCGAAGTACTGGCAGTAGGCATAGGGGCAAGCAGCAGACTGTTGCGAATGC 14960
Query 118282 CCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCT 118341
| | ||| | | | ||| ||| |||||||| || | | || | | |
Sbjct 14959 CGTGCTCCTTGACCTGCTCCCGGAGGTTCTCCCAGTCCCAGAGGTCAGAAGGCTTCACAT 14900
Query 118342 GCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATG 118401
|||||| || |||||||| ||||| | || || || || |||| || || || |
Sbjct 14899 TCCACATGTCGAACTGGAGAATACCCTCAGAGGCGGGAGAGCCCTTGAAGGTGGAGTAGG 14840
Query 118402 GGCCCTCAACCTCCGCCAATTCGGAGCTC-GCCTCGAGGGCTGCGTGATACATTGTTTCA 118460
| ||||| ||| |||| | | | | || |||||| || || || || || ||
Sbjct 14839 GACCCTCCTCCTTGGCCAGCT-GCACCGAAGCAGTGAGGGCAGCATGGTAGATGGTCTCG 14781
Query 118461 AAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAA-AAT 118519
|| || | || | | |||||| || || || | | || || | ||
Sbjct 14780 AAGATCTGCTTGTTGAGCTCACGAGCCTCGGGAGACTCGAAAGGCATGCG-CAGAGCAAG 14722
Query 118520 AAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTT 118579
|| |||| || ||||| |||||||| | ||||| || || |||| ||| || ||
Sbjct 14721 GAAAGCATCAGCAAGACCCTGGACACCAACACCAATGGGTCGGTGTCGCATGTTGCTGTT 14662
Query 118580 CCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGAC 118639
||||| | || || || ||| ||||||| ||| || || || |||
Sbjct 14661 GCGAGCTTCCGTAACAGGGTAGTGGTTCACGTCGATAATCCTGTTCAGGTTGCGAACGAC 14602
Query 118640 AACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCAT---TGAC 118696
||||| ||||| || || | ||| | | | ||| | || || || || | |||
Sbjct 14601 AACCTGTGTGACGTCGTGCAACTTCTGGAAGTCATA---GCAAGCATCATCGTAGTTGAT 14545
Query 118697 ATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTA 118756
|| ||| ||||| | || || || || || |||| |||||| | |||
Sbjct 14544 GAACGAAGGCAGGGCCAGAGAAGCAAGGTTGCAGACAGCAACCTCATCAGGGGCGCAGTA 14485
Query 118757 CTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGA 118816
||| ||||| || ||||| | || || || |||||||||| |||||| || ||
Sbjct 14484 CTCGATAATCTCGGTGCAGAGATTGGAGCTACGGATGGTGCCCAGGTTCTTCTGGTTGCT 14425
Query 118817 CTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTT 118876
||| ||| || |||||||| |||||| | || | || ||||| || || | ||
Sbjct 14424 CTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGCGCCTC 14365
Query 118877 GAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGG----CTCGCCCCTCT 118931
||| || || | ||||| | || | || || ||| ||| || |||| ||
Sbjct 14364 GAGGATGGCATACCAGAGCTTCTGGGCCTT---CA-TGGTCTTGCGACCCTTGCCCGCCT 14309
Query 118932 TCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGT 118991
|| || |||||| ||| || || || ||||| || || | || | || || ||
Sbjct 14308 TC-TCATACTTTTCGTAAAGAGCCTCGAACTCCTCGCCATAGCAGTCGGCCAGACCGGGG 14250
Query 118992 GCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGG 119051
|| | || || | ||| | ||| | ||| || ||| || ||||||||||||||
Sbjct 14249 CACTCGTTGGGACACATGAGGGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGA 14190
Query 119052 TCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTG 119111
|| || |||||||| ||| ||| || || || ||| | || || | || || ||
Sbjct 14189 TCGGGAATCCAGAGAGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTGCCGTGGTTC 14130
Query 119112 AGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATT 119171
|||| || | || || | || ||| |||||||| || || ||||| | || |
Sbjct 14129 TTGCGCAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAG 14070
Query 119172 GACCCCTTACGACGA------CCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACA 119225
| || | | || ||| |||||| || |||| |||||| ||| || |||
Sbjct 14069 GCACC---AGGTCGCTTGTTGCCACCCTGGTCGACGTACCGGGCAGTGTTGTTGAAGACA 14013
Query 119226 CGAAGCATTGGAATGATACCATCGGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTAT 119283
|||||||| ||| ||| ||| | ||| || || || || ||| || ||| | |
Sbjct 14012 CGAAGCATGGGAGTGACACCGTTGGAGGTACCGTTGGTACCAGCGATGTAAGAGCC--AG 13955
Query 119284 TGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGC 119343
|||| | || ||||| || || || ||||| || ||| ||| ||||| || |
Sbjct 13954 TGGCACGGATTCGGTGGACGTTCAGGCCGATACCACCCGCCATCTTGGAGATCATGGCAC 13895
Query 119344 ACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGC 119403
| | ||||| | | || || || || || ||| | || | ||| |||||||
Sbjct 13894 AGGTCTTGAGAGTATCATAAATACCCTCAATGCTGTCCTCTTTCATATCGACCAGGAAGC 13835
Query 119404 AGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGA 119463
| |||| |||||| ||| |||||||| |||||||| || || | || ||| |||
Sbjct 13834 ATGAGGACAGCTGAGGCTGGGGAGTACCAGCATTGAAGAGGGTGGGGGAGGCATGGGTGA 13775
Query 119464 ACATACCTTG--GGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTG 119521
| | |||| ||||| || ||||||||||| ||| ||| || || ||
Sbjct 13774 --AGAACTTGCTCGACATGAGGTTGTAGGTCTCCAGGACACGCTCAATATCGTCACCCCA 13717
Query 119522 AATACCGATCGAGACCCGCATAAACATGTATTGGGG 119557
|| |||| || || ||||| | ||||| |||||
Sbjct 13716 GATGCCGACAGACACACGCATGATCATGTGCTGGGG 13681
>seq1098
Length=11580
Score = 136 bits (150), Expect = 5e-27
Identities = 528/815 (65%), Gaps = 21/815 (3%)
Strand=Plus/Minus
Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787
||||| || || ||||||||||||||||| ||||| || | | | ||| ||||||||
Sbjct 10303 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTCCATG 10244
Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAAT-TGCTGGCACTCCAATCTGTTTGAGGAGACG 129846
|| || || ||||| | | || | | | || | | | | |||||| ||
Sbjct 10243 AAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTGCCGAGGGCGAC-GAGGAGGCG 10185
Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906
|| | |||| |||| ||||||| ||| |||| |||||| |||| ||| ||
Sbjct 10184 GTCGGCGACGAACTCGATGTACTGCTTCATGAGGTCGGCGTTCATGCCGAGCAGGGCGCA 10125
Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966
||||| || || | |||| ||| ||||||| || || || | |||| | ||
Sbjct 10124 GGGGAGGGCCTCGGTCAGGAACTCCTGCTCAATGGTGACGGCATCGGTGATGATGTCCTG 10065
Query 129967 AATGGTCTCCGTGC---CAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTC 130023
||| || | ||| || | | ||| | | | || ||| || | |||| ||
Sbjct 10064 GATGACCTGCTTGCTGGCACGGCCCTTGAGGTGGGAGTGGAGGAGG--CATG-CAAAGTC 10008
Query 130024 CTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAG 130083
||| |||||||||||||| |||||||| || || || ||| ||| || ||||||||
Sbjct 10007 GGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCCAGGCATGAG 9948
Query 130084 ACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCAC 130143
|| |||||||| | |||||| || | ||| | || ||||||||| ||||| ||
Sbjct 9947 GCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATACCCTCGAC 9888
Query 130144 ACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATCAAACCACTTCA 130202
|| || || | |||||||| ||||||||| || | |||| | | ||| |
Sbjct 9887 GGCAGCAAAGGCGACGAGACGCTGAGCAAAGGA-CGAGTTCTTGTCCTGGATCCATCGGA 9829
Query 130203 TCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCT 130262
| ||||| | ||||| || ||| || |||| ||||| || || | ||||| |
Sbjct 9828 TGGCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTTGAAGAGGTAGG 9769
Query 130263 TCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGA 130322
| || | || || |||||||| | || ||||| || || || ||| ||||
Sbjct 9768 TTCGTTGAGCAGGCTCCTTGATGTAGGTGTCAATGAGGAGCGAGTAGGTCTCGGAGTGGA 9709
Query 130323 CCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCA 130381
| | ||| || | ||| | ||||||| | || || ||| ||||| |||||
Sbjct 9708 TGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCATCGGGCCTCGGGGATCTGGACCTC- 9651
Query 130382 TCTGCAAAATTGTTATTGATA---TTCTCAAAAACAATTCCATCGGACCCAGCAAAAAAC 130438
| || ||| | | || | ||||| || || || || || |||| || ||
Sbjct 9650 GCCGCTGAATCG--CTCGACAAGGTTCTCGTTGACGATGCCGTCAGAGGCAGCGAAGAAG 9593
Query 130439 GCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCA 130495
|| ||||| | | ||| ||| || | | ||| || | ||||||||||
Sbjct 9592 GCGAGGATGTGGGAGACGAAGAACTGCTCGTCGGCAGTCAGGCGGTTGTTCCAGTCGTGG 9533
Query 130496 AGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530
|||||||| || ||||| | |||||| ||||||||
Sbjct 9532 AGATCCTTGGATAGATCAATCTCCTCGGCAGTCCA 9498
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618290702615520
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