Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20cuneirostrum_20[genbank_20GCA_5F001680505.1_202016-07-06]
18,692 sequences; 49,007,756 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq398 259 6e-64
seq1098 132 6e-26
>seq398
Length=19136
Score = 259 bits (286), Expect = 6e-64
Identities = 937/1444 (65%), Gaps = 53/1444 (4%)
Strand=Plus/Plus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
|| ||| ||||| ||||||| ||| | |||| || || || || ||||| ||||
Sbjct 13681 CCCCAGCACATGATCATGCGTGTGTCTGTCGGCATCTGGGGTGACGATATTGAGCGTGTC 13740
Query 104282 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 104339
||||||| ||| || ||||| |||| | | ||| || || | || |||||||
Sbjct 13741 CTGGAGACCTACAACCTCATGTCGAGCAAGTTCT--TCACCCATGCCTCCCCCACCCTCT 13798
Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399
||||||||||||| || || || ||||| |||||||| ||| | || ||||
Sbjct 13799 TCAATGCTGGTACTCCCCAGCCTCAGCTGTCCTCATGCTTCCTGGTCGATATGAAAGAGG 13858
Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459
|| || | ||||| |||| ||||| | | ||||| ||||| ||| ||| |
Sbjct 13859 ACAGCATTGAGGGTATTTATGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGGCGG 13918
Query 104460 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 104519
| ||||| || || || |||| | | |||| | ||| || || || |
Sbjct 13919 GTGGTATCGGCCTGAACGTCCACCGAATCCGTGCCACTGGCTCTTACATCGCTGGTACCA 13978
Query 104520 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 104579
| ||| || | ||| | | ||| |||||||| || || ||| ||| || || || |
Sbjct 13979 ACGGTACCTCCAACGGTGTCACTCCCATGCTTCGTGTCTTCAACAACACTGCCCGGTACG 14038
Query 104580 TAAATCAAGCTGGGCGTCGAAAGGGATCTA------TCGCAGTCTATCTTGAGCCATGGC 104633
| | || | ||| | | ||| || || | || |||| |||||||| ||||
Sbjct 14039 TCGACCAGGGTGG-CAAC--AAGCGACCTGGTGCCTTTGCCATCTACCTTGAGCCCTGGC 14095
Query 104634 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGT 104693
|||| ||| || | ||||||||||| |||| ||||| || | ||||||| ||
Sbjct 14096 ACGCAGATGTCTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGGTCCGCG 14155
Query 104694 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753
|||||| || ||| |||||||||||||| ||||||||||||||| | || ||| |||
Sbjct 14156 CCCGCGACCTGTTCCTGGCTCTCTGGATTCCCGATCTCTTCATGAAGCGTGTCGAGAAGA 14215
Query 104754 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGA-TGCCGTGGGT 104812
|| | ||| | ||| | ||||| || || || ||||| |||| ||| | ||
Sbjct 14216 ACGGTGACTGGACCCTCATGTGTCCCAACGAGTGCCCCGGTCTGGCCGACTGCTAT-GGC 14274
Query 104813 GAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAG------AAGGTCGGGCGACTGCG 104866
|||||||| || || |||||| |||||| ||| | | | ||||| ||| |
Sbjct 14275 GAGGAGTTCGAGGCTCTTTACGAAAAGTATGAGAAGGCGGGCAAGGGTCGCAAGACCATG 14334
Query 104867 ACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACA 104926
| || |||| || | ||| | || || ||| || | || |||||||| || |
Sbjct 14335 AAGG-CCCAGAAGC-----TCTGGTATGCCATCCTCGAGGCGCAGACCGAGACCGGCAAC 14388
Query 104927 CCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTG 104986
|| | |||||| ||||| ||| ||| |||| ||||| || || ||||| ||||
Sbjct 14389 CCCTTCATGCTCTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACCTGGGCACC 14448
Query 104987 ATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCT 105046
||| || ||||||||||| || || || | || | | | |||||| |||
Sbjct 14449 ATCCGTAGCTCCAATCTCTGCACCGAGATTATCGAGTACTGCGCCCCTGATGAGGTTGCT 14508
Query 105047 GTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTT 105106
|| || ||||| || || | || || || | || || || || | || ||
Sbjct 14509 GTCTGCAACCTTGCTTCTCTGGCCCTGCC----TTCGTTCAT-CAACTACGATGATGCTT 14563
Query 105107 GATTATG------AAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGA 105160
| |||| | || | ||||| || || | |||| ||||| |||||
Sbjct 14564 G-CTATGACTTCCAGAAGTTGCACGACGTCACACAGGTTGTCGTTCGCAACCTGAACAGG 14622
Query 105161 GTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGT 105220
|||| || || ||||| ||| | ||||| || || ||| |||||||
Sbjct 14623 ATTATCGACGTGAACCACTACCCTGTTACGGAAGCTCGCAACAGCAACATGCGACACCGA 14682
Query 105221 CCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATT 105279
|| |||||| | ||||| |||||||| || |||| ||| || || || || || || ||
Sbjct 14683 CCCATTGGTGTTGGTGTCCAGGGTCTTGCTGATGCTTTCCTTGCTCTG-CG-CATGCCTT 14740
Query 105280 T-GATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCG 105338
| || || ||| || || |||| || || || |||||||| || || || |
Sbjct 14741 TCGAGTCTCCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGACCATCTACCATGCTG 14800
Query 105339 CTCT---TGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGG 105395
| || || || || | || |||| ||| || ||||| || ||||| |||
Sbjct 14801 CCCTCACTGCTTCG-GTGC--AGCTGGCCAAGGAGGAGGGTCCCTACTCCACCTTCAAGG 14857
Query 105396 GTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT-- 105453
| ||||| || || | || | || || || || |||| |||| |||| | | ||
Sbjct 14858 GCTCTCCCGCCTCTGAGGGTATTCTCCAGTTCGACATGT-GGAATGTGA-AGCCTTCTGA 14915
Query 105454 TCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCT 105513
| || |||||||| ||| ||| | |||||||| | || |||| ||||||||
Sbjct 14916 CCTCTGGGACTGGGAGAACCTCCGGGAGCAGGTCAAGGAGCACGGCATTCGCAACAGTCT 14975
Query 105514 CCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTT 105573
|| | || || ||||| || ||| || | || ||| |||| || || || |||||
Sbjct 14976 GCTGCTTGCCCCTATGCCTACTGCCAGTACTTCGCAGATCCTGGGCAACAACGAGTGCTT 15035
Query 105574 TGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGT 105633
|| || ||||| | |||||||| | | | | |||||| || ||||| | | ||
Sbjct 15036 CGAGCCTTACACCTCCAACATCTACCAGCGCCGTGTCCTCGCTGGCGAGTTCCAGGTCGT 15095
Query 105634 CAAC 105637
||||
Sbjct 15096 CAAC 15099
>seq1098
Length=11580
Score = 132 bits (146), Expect = 6e-26
Identities = 204/286 (71%), Gaps = 4/286 (1%)
Strand=Plus/Plus
Query 94672 CTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGC-AGCTCTTTGAAGCCATCCA 94730
||||| |||| || || ||||| |||| | | ||| | | ||||| | ||||| |
Sbjct 9732 CTCATTGACACCTACATCAAGGAGCCTGCTCA-ACGAACCTACCTCTTCAACGCCATTGA 9790
Query 94731 AACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGT 94789
|| | || || || | ||||| || || ||||| || ||| | | ||||
Sbjct 9791 GACCATCCCCTGCATCCGCAAGAAGGCCGACTGGGCCATCCGATGGATCCAGGACAAGAA 9850
Query 94790 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 94849
| ||| |||||||| |||| ||| |||| ||||| || ||||||||||||||| |
Sbjct 9851 CTCGT-CCTTTGCTCAGCGTCTCGTCGCCTTTGCTGCCGTCGAGGGTATCTTCTTCAGCG 9909
Query 94850 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 94909
|| |||| | | || | |||||||||||||| || |||||||| || || ||| |
Sbjct 9910 GTGCCTTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTTT 9969
Query 94910 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955
|||||||||| ||||||||||||||||| || ||| || |||||
Sbjct 9970 CCAACGAGCTCATCTCTCGTGACGAGGGTCTTCACACCGACTTTGC 10015
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583124521114080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |