Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20cuneirostrum_20[genbank_20GCA_5F001680505.1_202016-07-06]
18,692 sequences; 49,007,756 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq593 113 4e-20
>seq593
Length=14316
Score = 113 bits (124), Expect = 4e-20
Identities = 201/289 (70%), Gaps = 7/289 (2%)
Strand=Plus/Plus
Query 29759 TGAGGGTCGTAACCCTCCAGGGAGAAATCCTCTGCCTTAAAGTCGTCCAGGCTCTCCACC 29818
|||||||| || |||| | |||||||| ||||| | |||| | ||| ||| ||
Sbjct 9670 TGAGGGTCATAGCCCTTGATAACAAAATCCTCCGCCTTCCACCCGTCGATGCT-TCCGCC 9728
Query 29819 CTCCTGT----TTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTT 29874
|| || | | ||| ||| |||||| | |||||| | ||| ||||| || ||
Sbjct 9729 CTTCTCTCGAGTAATCTCCAGCTCTGGAAAGTCACGGGGCTCGCGCTCAAGCTGCGTGTT 9788
Query 29875 CAGCGGTTCCACGTTATCCAGGTAGACGTGAGCGTCTCCCAGGTTGTGGACAAACTCTCC 29934
|| | ||||||| || ||||||||||| || || |||| | ||| | | || |
Sbjct 9789 GAGAGCATCCACGTGGTCGAGGTAGACGTGCGCATCGCCCATGACGTG-AGTGAGGCTGC 9847
Query 29935 C-GGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGT 29993
| || | | || |||||| |||||||||| || || || | ||||||||| ||||
Sbjct 9848 CAGGCACCAATTCGCAGACGTGCGCCATCATGTGTGTCAGCAGTGCGTAGCTGGCAATGT 9907
Query 29994 TAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 30042
| || || || ||||| |||||||| | || | |||||||||||| ||
Sbjct 9908 TGAACGGGACGCCGAGACCCATGTCGCAGGATCGCTGGTAGAGCTGGCA 9956
Score = 91.5 bits (100), Expect = 1e-13
Identities = 187/272 (69%), Gaps = 6/272 (2%)
Strand=Plus/Plus
Query 30188 AGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAA 30247
||||| || || ||| | |||| |||||| | | | || |||||| || || ||
Sbjct 10141 AGCTGGTCGACGCCCTTGCCCGTGTAGTCCGTCTTGGCATCAACGTACTCGGCGCCAAAG 10200
Query 30248 TGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCC 30307
|| | ||| ||||| |||||||| || || || || || | || | ||| | || |||
Sbjct 10201 TGTCGCCATTGGAAGCCGTACACGGGGCCGAGATCGCCGACCTCGCGGTGGTTGAGGCCG 10260
Query 30308 CTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTT--TACCCCCTTCTCAG 30365
||||| | || || | ||| || ||| ||||||||||||| | || | || | |
Sbjct 10261 AGGTTGTCGAGGAACTCGCGGGAGCCATTGCCGTCCCAGATCTTGATGCCGGCCTCGCTG 10320
Query 30366 AGAGCTCTTTGGAGTTTGTG-GACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCC 30424
|| ||| ||||| |||| ||||| || |||||| || ||||| | | ||||||
Sbjct 10321 AG-GCT-GGTGGAGGATGTGTTGCCCTC-GATGAACCAGAGGAGCTCGGCGATGACGGCG 10377
Query 30425 TTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30456
||||| | |||||| |||||||||||
Sbjct 10378 CGGGTGAAGACGCGCTTGGTGGTGAGGAGGGG 10409
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406217838935664
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |