Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20cuneirostrum_20[genbank_20GCA_5F001680505.1_202016-07-06]
18,692 sequences; 49,007,756 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq593 129 5e-25
seq1402 87.8 1e-12
>seq593
Length=14316
Score = 129 bits (142), Expect = 5e-25
Identities = 205/290 (71%), Gaps = 7/290 (2%)
Strand=Plus/Plus
Query 29530 GTGAGGGTCGTAGCCCTCCAGGGAGAAATCCTCTGCCTTAAAGTCGTCCAGGCTCTCCAC 29589
||||||||| ||||||| | |||||||| ||||| | |||| | ||| ||| |
Sbjct 9669 GTGAGGGTCATAGCCCTTGATAACAAAATCCTCCGCCTTCCACCCGTCGATGCT-TCCGC 9727
Query 29590 CCTCCTGT----TTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAATCC 29645
||| || | | ||| ||| |||||| | |||||| | ||| ||||| |
Sbjct 9728 CCTTCTCTCGAGTAATCTCCAGCTCTGGAAAGTCACGGGGCTCGCGCTCAAGCTGCGTGT 9787
Query 29646 TCAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTC 29705
| || | ||||||||||| ||||||||||| ||||| |||| | ||| | | ||
Sbjct 9788 TGAGAGCATCCACGTGGTCGAGGTAGACGTGCGCATCGCCCATGACGTG-AGTGAGGCTG 9846
Query 29706 CC-GGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATG 29764
|| || | | || |||||| |||||||||| || || || | ||||||||| |||
Sbjct 9847 CCAGGCACCAATTCGCAGACGTGCGCCATCATGTGTGTCAGCAGTGCGTAGCTGGCAATG 9906
Query 29765 TTAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCA 29814
|| || || || ||||| |||||||| | || | |||||||||||||||
Sbjct 9907 TTGAACGGGACGCCGAGACCCATGTCGCAGGATCGCTGGTAGAGCTGGCA 9956
>seq1402
Length=9781
Score = 87.8 bits (96), Expect = 1e-12
Identities = 130/180 (72%), Gaps = 6/180 (3%)
Strand=Plus/Minus
Query 53494 CGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGCGACAAGTTTGCATC-CT 53552
||||||||| | ||||||| ||| | || |||| |||||||||||||| || |
Sbjct 4235 CGTCAAGGTCCGTGTGAGGACGACCAAGATTCCCCAGATTGGCGACAAGTTTGCCTCTCG 4176
Query 53553 TCACGGCGCAAAAGGGGACATGCGGAGCG--GTCCTGACTCAGGAGGACATGCCCTTCGA 53610
|||||| || ||||| || || | | || | | ||||||||| |||||||||
Sbjct 4175 TCACGGA-CAGAAGGGTACCATTGGTGTGACGTACCG--TCAGGAGGATATGCCCTTCAG 4119
Query 53611 CAAGGACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCCTCCAGGATGAC 53670
|| ||| || ||| || ||| | ||||| |||||||||||| |||| || | |||||
Sbjct 4118 CAGGGAGGGTGTGACACCGGACATTATCATTAACCCCCACGCCATTCCGTCGCGAATGAC 4059
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406070672469112
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |