Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20] 287 sequences; 48,274,071 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq124 120 3e-22 >seq124 Length=1203342 Score = 120 bits (132), Expect = 3e-22 Identities = 353/537 (66%), Gaps = 18/537 (3%) Strand=Plus/Plus Query 16999 GATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATAT 17058 ||| || ||||| || || |||| || ||||| || || ||||| | ||| || || Sbjct 1088288 GATGAGCTCGTTGGAGAAGGTCAGACCAGGCATGAGACCACGCTTCTTGAGCCAGAAGAT 1088347 Query 17059 CGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTC 17118 | ||| || | ||| ||||| || |||||||||| || || |||| | || | Sbjct 1088348 GGAGGCAAAGGCACCACTGAAGAAGATGCCCTCGACGGCAGCGAAGGCGACGAGACGCTG 1088407 Query 17119 GGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTT-TTGCTTTA 17177 || | | || ||| |||| |||||||| |||| ||||| || |||| | Sbjct 1088408 AGCAAAGGACGAGTCCTTGTCCTGAATCCATCGGATAGCCCAGTCGGCCTTCTTGCGG-A 1088466 Query 17178 TGCAATCCATCGTTTCTATGGCCTTAAATAATTTCTCTTTTTCCTGT--AGG-TCGATTA 17234 |||| || || || ||||| || || | | | || ||| ||| || | | Sbjct 1088467 TGCAGGGGATGGTCTCAATGGCGTTGAAGAGGTA---TGTTCGCTGAGAAGGCTCCTTGA 1088523 Query 17235 TATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAA 17294 | || || || ||||| || ||| | |||||||| ||||||||||| ||||| | Sbjct 1088524 TGTAGGTGTCAATGAGCAGAGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGA 1088583 Query 17295 ATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGAT 17354 | ||||| |||||||| || || | || ||||| || || |||||| || | || | Sbjct 1088584 AGCCGTAGAAGCATCGAGCCTCAGGGATCTGAACCTCGCCGCTGAATCGCTCAACAAGGT 1088643 Query 17355 TTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATT 17414 | ||||| ||||||||||| || ||||| || || | || || ||||| | | Sbjct 1088644 TCTCGTTGACGATGCCGTCAGAGGCAGCGAAGAAGGCAAGGATGTGGGAGATGAAGAACT 1088703 Query 17415 TTTCGTCCGGTGTAAGAACGCG------CCAGTCCTTTAAATCTTTGGATATATCCACTT 17468 ||||| | || || ||| |||||| | | ||| ||||| | ||| | | Sbjct 1088704 GCTCGTCGGAAGTCAG---GCGGTTGTTCCAGTCGTGGAGATCCTTGGACAGATCGATCT 1088760 Query 17469 CTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAATATCATTGT 17525 | |||| ||||| ||| ||| | ||||| || ||||| | ||| || | ||||| Sbjct 1088761 CCTCGGCAGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATTTGCCAGATCT-ATTGT 1088816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517543743305160