Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20]
287 sequences; 48,274,071 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq124 120 3e-22
>seq124
Length=1203342
Score = 120 bits (132), Expect = 3e-22
Identities = 353/537 (66%), Gaps = 18/537 (3%)
Strand=Plus/Plus
Query 16999 GATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATAT 17058
||| || ||||| || || |||| || ||||| || || ||||| | ||| || ||
Sbjct 1088288 GATGAGCTCGTTGGAGAAGGTCAGACCAGGCATGAGACCACGCTTCTTGAGCCAGAAGAT 1088347
Query 17059 CGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTC 17118
| ||| || | ||| ||||| || |||||||||| || || |||| | || |
Sbjct 1088348 GGAGGCAAAGGCACCACTGAAGAAGATGCCCTCGACGGCAGCGAAGGCGACGAGACGCTG 1088407
Query 17119 GGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTT-TTGCTTTA 17177
|| | | || ||| |||| |||||||| |||| ||||| || |||| |
Sbjct 1088408 AGCAAAGGACGAGTCCTTGTCCTGAATCCATCGGATAGCCCAGTCGGCCTTCTTGCGG-A 1088466
Query 17178 TGCAATCCATCGTTTCTATGGCCTTAAATAATTTCTCTTTTTCCTGT--AGG-TCGATTA 17234
|||| || || || ||||| || || | | | || ||| ||| || | |
Sbjct 1088467 TGCAGGGGATGGTCTCAATGGCGTTGAAGAGGTA---TGTTCGCTGAGAAGGCTCCTTGA 1088523
Query 17235 TATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAA 17294
| || || || ||||| || ||| | |||||||| ||||||||||| ||||| |
Sbjct 1088524 TGTAGGTGTCAATGAGCAGAGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGA 1088583
Query 17295 ATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGAT 17354
| ||||| |||||||| || || | || ||||| || || |||||| || | || |
Sbjct 1088584 AGCCGTAGAAGCATCGAGCCTCAGGGATCTGAACCTCGCCGCTGAATCGCTCAACAAGGT 1088643
Query 17355 TTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATT 17414
| ||||| ||||||||||| || ||||| || || | || || ||||| | |
Sbjct 1088644 TCTCGTTGACGATGCCGTCAGAGGCAGCGAAGAAGGCAAGGATGTGGGAGATGAAGAACT 1088703
Query 17415 TTTCGTCCGGTGTAAGAACGCG------CCAGTCCTTTAAATCTTTGGATATATCCACTT 17468
||||| | || || ||| |||||| | | ||| ||||| | ||| | |
Sbjct 1088704 GCTCGTCGGAAGTCAG---GCGGTTGTTCCAGTCGTGGAGATCCTTGGACAGATCGATCT 1088760
Query 17469 CTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAATATCATTGT 17525
| |||| ||||| ||| ||| | ||||| || ||||| | ||| || | |||||
Sbjct 1088761 CCTCGGCAGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATTTGCCAGATCT-ATTGT 1088816
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517543743305160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |