Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20]
287 sequences; 48,274,071 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq257 129 7e-25
>seq257
Length=3268735
Score = 129 bits (142), Expect = 7e-25
Identities = 442/684 (65%), Gaps = 14/684 (2%)
Strand=Plus/Minus
Query 53996 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 54055
|| ||||| | | ||| || |||| | || || || ||||| |||||||| || |||
Sbjct 717971 GGGCACATGAGGGTCCAGTCACCGTTCTTCTCAACACGCTTCATGAAGAGATCGGGGATC 717912
Query 54056 CAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 54115
|| ||||| | || || || | | | ||||| || || ||||| ||
Sbjct 717911 CAGAGAGCCAGGAACAGGTCGCGAGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGG 717852
Query 54116 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGC 54175
|| |||||| | | | ||| | ||||| || || | ||| |||| | | |||||
Sbjct 717851 TCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCAGGT 717792
Query 54176 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 54235
|| ||||| || |||||||| | ||||| || ||||| || | || | | ||| ||
Sbjct 717791 CGCTTGTTGCCACCCTGATCGACGTATCGGGCAGTGTTGTTGAAGACACGAAGCATGGGG 717732
Query 54236 ATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATAT-- 54293
| | ||| ||||| | ||| ||||| || | ||| || ||| ||||||| |||
Sbjct 717731 GTGACACCGTTGGAGGTACCGTTGGTACCAGCGATGTAAGAGCCAGTGGCACGGATACGG 717672
Query 54294 TACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG 54353
| | || | | || || || || ||||| || || || | || || || | |
Sbjct 717671 TGCACGTTCA--GGCCAATACCACCAGCCATCTTGGAAATCATGGCACAGGTCTTGAGAG 717614
Query 54354 TATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTT 54413
|||||||||| ||||| ||||| || ||| |||||| | || || || || | |
Sbjct 717613 TATCATAGATACCCTCAATACTGTCCTCCTTCATGTCGACAAGGAAGCATGAGGAGAGCT 717554
Query 54414 GGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAG 54473
|| | | || |||||||| || | ||| || || || || || || | || |
Sbjct 717553 GGGGCTGGGGGGTACCCGCATTGAACAGGGTGGGGGAGGCATGAGTGAAGAACTTGCTCG 717494
Query 54474 AAAGTAGATTGTACGTCTCGA----TAGCTGAGTCTATATC-CCATTGATGAATTCCTAC 54528
| | || ||||| ||||||| ||| | | | | || || |||| || ||
Sbjct 717493 ACATGAGGTTGTAAGTCTCGAGGACACGCTCAATGT-TGTCACCCCAGATG----CCAAC 717439
Query 54529 TGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAA 54588
| ||||||||| | |||||| || || | ||||| |||||| | || || || |
Sbjct 717438 AGAGACACGCATGATCATGTGTTGGGGACGCTCAACAATCTTGCCATCAATCTTGAGGAG 717379
Query 54589 GTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAAT 54648
||||||| || | ||| || || ||||| || | |||| ||||| || || || |
Sbjct 717378 GTAGGATCGCTCAAGAGTCTTGAAGCCAAAGTACTGGTATTGGAAGTCACGGTCATAGAC 717319
Query 54649 AATAACTGAGTTGAGTTTATCCTT 54672
||| | |||| || | |||||
Sbjct 717318 AATGGCGGAGTCAAGCTCCTCCTT 717295
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593719470023760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |