Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20]
287 sequences; 48,274,071 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq101 105 6e-18
seq57 95.1 1e-14
>seq101
Length=1115905
Score = 105 bits (116), Expect = 6e-18
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || ||||| | ||| |||| || | ||||||||||| || ||||| ||||| |
Sbjct 940079 CCACCACGCAGGCGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTC 940020
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| || | ||||| ||||| ||||| ||| | || || | |||||||||| |||
Sbjct 940019 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGGGGA 939960
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||| |||||||| |||||| || || | | ||| || || | ||||
Sbjct 939959 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 939900
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179
|| | ||| || ||||| || || | || ||||| || || ||||| |||
Sbjct 939899 TCAAGGGTGATCGTCTTCCCTGTGAGGGTCTTGACGAAGATCTGCATCTTG 939849
>seq57
Length=3318891
Score = 95.1 bits (104), Expect = 1e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | ||| || | ||| | ||||||||||| |||||||| ||||| ||
Sbjct 1504966 CCACCACGAAGGCGGAGAACGAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGCG 1504907
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|||||| || | ||||| ||||| || || ||| | || || | |||||| || ||
Sbjct 1504906 AGGGTTCGGCCATCCTCAAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGATCAGGAGGG 1504847
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||| |||||||| |||||| || || | | ||| || || | ||||
Sbjct 1504846 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATCGTGTCGGAAGACTCCACC 1504787
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGAC 21163
|| | ||| || ||||||||||| | || |||||
Sbjct 1504786 TCGAGGGTGATAGTCTTGCCGGTCAGGGTCTTGAC 1504752
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422257723016492
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |