Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20] 287 sequences; 48,274,071 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq124 315 7e-81 seq101 143 3e-29 seq179 132 5e-26 seq57 118 1e-21 >seq124 Length=1203342 Score = 315 bits (348), Expect = 7e-81 Identities = 562/809 (69%), Gaps = 16/809 (2%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||||||||| || |||||||| | ||||||| | || ||| Sbjct 1088809 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAGGAGATCGATCTG 1088750 Query 116696 TCCAAGGA-CACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAA 116751 |||||||| | | | ||||||| | ||| ||| | |||||| |||||| Sbjct 1088749 TCCAAGGATCTCCA-CGACTGGAACAACCGCCTGACTTCCGACGAGCAGTTCTTCATCTC 1088691 Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG 116811 ||| | || ||||| ||||| ||| |||||||||||||||||||| || || ||||| Sbjct 1088690 CCACATCCTTGCCTTCTTCGCTGCCTCTGACGGCATCGTCAACGAGAACCTTGTTGAGCG 1088631 Query 116812 TTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| ||||| ||| | | ||||| || |||||||||||||| |||||| || Sbjct 1088630 ATTCAGCGGCGAGGTTCAGATCCCTGAGGCTCGATGCTTCTACGGCTTCCAGATCATGAT 1088571 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT----GCGCTCTT 116927 ||||||| | ||||| || | || || ||||| ||||| ||| | | || ||| Sbjct 1088570 GGAGAACATCCACTCCGAGACCTACTCTCTGCTCATTGACACCTACATCAAGGAGC-CTT 1088512 Query 116928 CGGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGG 116987 | | | ||| | | | || |||||||| ||||| || || ||| || |||||| Sbjct 1088511 CTCA-GCGAACATAC--CTCTTCAACGCCATTGAGACCATCCCCTGCATCCGCAAGAAGG 1088455 Query 116988 CCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGG 117047 |||| ||||| | || ||||| | || || | |||| | |||| || || | Sbjct 1088454 CCGACTGGGCTATCCGATGGATTCAGGACAAGGACTCGTCCTTTGCTCAGCGTCTCGTCG 1088395 Query 117048 CCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCA 117107 ||||||| |||||||||||| ||||||| || || ||| |||| || ||||||| Sbjct 1088394 CCTTCGCTGCCGTCGAGGGCATCTTCTTCAGTGGTGCCTTTGCCTCCATCTTCTGGCTCA 1088335 Query 117108 AGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGG 117167 |||| || || |||||||| || ||||| ||| ||||||||||||||| | || |||| Sbjct 1088334 AGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGATGAGG 1088275 Query 117168 GTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGG 117227 |||| || |||||||||||| | || | || | | || | ||| | Sbjct 1088274 GTCTTCACACCGACTTTGCCTGCCTCCTTCACTCTCACCTCAAGGGCCGTGCTAGCAAGC 1088215 Query 117228 CGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAG 117287 | | || ||| ||| |||| || || ||| |||| |||||| ||||| || || | Sbjct 1088214 AGGTCATCCAGGACATCATCACTGATGCCGTCACCATTGAGCAGGAGTTCCTGACTGAGG 1088155 Query 117288 CGCT-GCCGGTGCGTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTTC 117346 | || || |||| || || || | || || ||| ||| |||||||||||| Sbjct 1088154 CTCTCCCCTGTGC-CCTCCTCGGCATGAACGCAGACCTCATGAAGCAGTACATCGAGTTC 1088096 Query 117347 GTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACCCG 117406 ||||||||| | || ||| ||| || | | || |||| |||||| | ||||||| Sbjct 1088095 GTCGCCGACCGTCTCCTGGTCGCCCTCGGCAACGACAAGGTCTACAAGGCCACCAACCCC 1088036 Query 117407 CTGGACTTTATGAACCTCATCT-CCTTGG 117434 | ||||| ||| | ||||| |||||| Sbjct 1088035 TTCGACTTCATGGAGAACATCTCCCTTGG 1088007 >seq101 Length=1115905 Score = 143 bits (158), Expect = 3e-29 Identities = 172/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||||| || || ||||| || || || |||||| | || || || | Sbjct 939850 AAGATGCAGATCTTCGTCAAGACCCTCACAGGGAAGACGATCACCCTTGAGGTGGAGTCT 939909 Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 |||||| | | | |||| ||||| || || | ||||| |||||||| ||| |||| Sbjct 939910 TCCGACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGA 939968 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| || ||||||| || ||||| ||||| || || | |||||||| | |||||| Sbjct 939969 CCAGCAGCGCCTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTA 940028 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||||||| |||| || || || || | ||| || | || || Sbjct 940029 CAACATCCAGAAGGAGTCCACCCTCCACCTGGTCCTCCGCCTGCGTGGTGG 940079 >seq179 Length=1234945 Score = 132 bits (146), Expect = 5e-26 Identities = 138/181 (76%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || |||||||| ||||||||| |||| ||||| || | |||| | | Sbjct 140784 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCATT 140843 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | ||||| || || | ||||| |||||||||||| |||| ||||| ||||| Sbjct 140844 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGATCAGCAGCGACTG 140903 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| ||| ||||| ||||| || || | || || ||| ||||||||||||||||||| Sbjct 140904 ATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGAACTCTCTCCGACTACAACATCCAGAAG 140963 Query 40879 G 40879 | Sbjct 140964 G 140964 >seq57 Length=3318891 Score = 118 bits (130), Expect = 1e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || ||||| || || |||||||| | || ||||| ||| | Sbjct 1505196 ATGCAGATCTTTGTCAAGACTCTCACCGGAAAGACCATCACTCTGGAGGTCGAGTCCAGC 1505255 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | | ||| || |||| ||||| ||||| || ||| | |||||| Sbjct 1505256 GATACCATTGACAATGTGAAGTCCAAGATTCAGGACAAGGAGGGTATTCCCCCCGACCAG 1505315 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || ||||| |||| ||| || || |||||||| |||| |||||| | ||||||||| Sbjct 1505316 CAGCGACTTATCTTCGCTGGTAAGCAGCTGGAAGACGGTCGCACCTTGTCTGACTACAAC 1505375 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 || ||||||||| | || || || || ||| Sbjct 1505376 ATTCAGAAGGAGTCGACCCTTCACCTTGTG 1505405 Score = 111 bits (122), Expect = 2e-19 Identities = 146/200 (73%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 40700 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGC 40759 |||| || || || || ||||| || |||||| |||| || || | |||||| | Sbjct 1504750 TCGTCAAGACCCTGACCGGCAAGACTATCACCCTCGAGGTGGAGTCTTCCGACACGATCG 1504809 Query 40760 A-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | |||| ||||| || || | ||||| ||||||||||| | || ||||| || || Sbjct 1504810 ACAACG-TCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCTCCTGATCAGCAGCGCCTG 1504868 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| || || || ||||| || || | || |||||| |||||||||||| |||||| Sbjct 1504869 ATCTTTGCTGGAAAGCAGCTTGAGGATGGCCGAACCCTCGCCGACTACAACATTCAGAAG 1504928 Query 40879 GAGGCCACGCTGCATCTAGT 40898 ||| |||| || ||||| || Sbjct 1504929 GAGTCCACCCTTCATCTCGT 1504948 Score = 111 bits (122), Expect = 2e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || ||||| || || ||||||||| | || || ||| | || Sbjct 1504968 ATGCAAATCTTCGTCAAGACACTCACTGGAAAGACCATCACCCTTGAGGTGGAATCGTCC 1505027 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| | ||| || || | || || || || || || | || || Sbjct 1505028 GATACCATCGATAACG-TGAAGTCGAAGATCCAGGATAAGGAAGGTATTCCTCCTGATCA 1505086 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || ||||| |||| ||| ||||| || || || |||| || || |||| ||||||||| Sbjct 1505087 ACAGCGACTTATCTTCGCCGGCAAGCAACTCGAGGACGGCCGAACTCTCAGCGACTACAA 1505146 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| | || ||||| || || Sbjct 1505147 CATCCAGAAGGAATCAACTCTGCACCTTGT 1505176 Score = 107 bits (118), Expect = 2e-18 Identities = 137/186 (74%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 40714 ACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAGGA 40772 |||||||| ||||||||| |||| || || || | || | | | | |||| | ||| Sbjct 1504488 ACGGGCAAGACCATCACCCTCGAGGTTGAGTCCTCGGATACCATCGACAACGTT-AAGTC 1504546 Query 40773 AAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAA 40832 || |||| ||||| ||||||||||| | || ||||| || || |||| || || || Sbjct 1504547 GAAGATTCAGGACAAGGAGGGCATCCCTCCTGATCAGCAGCGCCTGATCTTTGCTGGAAA 1504606 Query 40833 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892 ||||| || || | |||||||| ||| |||||||||||||||||| |||| || || Sbjct 1504607 GCAGCTTGAGGATGGCCGCACCCTTTCCGATTACAACATCCAGAAGGAGTCCACCCTCCA 1504666 Query 40893 TCTAGT 40898 || || Sbjct 1504667 CCTCGT 1504672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515217351651120