Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20]
287 sequences; 48,274,071 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq124 315 7e-81
seq101 143 3e-29
seq179 132 5e-26
seq57 118 1e-21
>seq124
Length=1203342
Score = 315 bits (348), Expect = 7e-81
Identities = 562/809 (69%), Gaps = 16/809 (2%)
Strand=Plus/Minus
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| |||||||| ||||||||||| || |||||||| | ||||||| | || |||
Sbjct 1088809 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAGGAGATCGATCTG 1088750
Query 116696 TCCAAGGA-CACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAA 116751
|||||||| | | | ||||||| | ||| ||| | |||||| ||||||
Sbjct 1088749 TCCAAGGATCTCCA-CGACTGGAACAACCGCCTGACTTCCGACGAGCAGTTCTTCATCTC 1088691
Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG 116811
||| | || ||||| ||||| ||| |||||||||||||||||||| || || |||||
Sbjct 1088690 CCACATCCTTGCCTTCTTCGCTGCCTCTGACGGCATCGTCAACGAGAACCTTGTTGAGCG 1088631
Query 116812 TTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871
||| ||||| ||| | | ||||| || |||||||||||||| |||||| ||
Sbjct 1088630 ATTCAGCGGCGAGGTTCAGATCCCTGAGGCTCGATGCTTCTACGGCTTCCAGATCATGAT 1088571
Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT----GCGCTCTT 116927
||||||| | ||||| || | || || ||||| ||||| ||| | | || |||
Sbjct 1088570 GGAGAACATCCACTCCGAGACCTACTCTCTGCTCATTGACACCTACATCAAGGAGC-CTT 1088512
Query 116928 CGGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGG 116987
| | | ||| | | | || |||||||| ||||| || || ||| || ||||||
Sbjct 1088511 CTCA-GCGAACATAC--CTCTTCAACGCCATTGAGACCATCCCCTGCATCCGCAAGAAGG 1088455
Query 116988 CCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGG 117047
|||| ||||| | || ||||| | || || | |||| | |||| || || |
Sbjct 1088454 CCGACTGGGCTATCCGATGGATTCAGGACAAGGACTCGTCCTTTGCTCAGCGTCTCGTCG 1088395
Query 117048 CCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCA 117107
||||||| |||||||||||| ||||||| || || ||| |||| || |||||||
Sbjct 1088394 CCTTCGCTGCCGTCGAGGGCATCTTCTTCAGTGGTGCCTTTGCCTCCATCTTCTGGCTCA 1088335
Query 117108 AGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGG 117167
|||| || || |||||||| || ||||| ||| ||||||||||||||| | || ||||
Sbjct 1088334 AGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGATGAGG 1088275
Query 117168 GTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGG 117227
|||| || |||||||||||| | || | || | | || | ||| |
Sbjct 1088274 GTCTTCACACCGACTTTGCCTGCCTCCTTCACTCTCACCTCAAGGGCCGTGCTAGCAAGC 1088215
Query 117228 CGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAG 117287
| | || ||| ||| |||| || || ||| |||| |||||| ||||| || || |
Sbjct 1088214 AGGTCATCCAGGACATCATCACTGATGCCGTCACCATTGAGCAGGAGTTCCTGACTGAGG 1088155
Query 117288 CGCT-GCCGGTGCGTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTTC 117346
| || || |||| || || || | || || ||| ||| ||||||||||||
Sbjct 1088154 CTCTCCCCTGTGC-CCTCCTCGGCATGAACGCAGACCTCATGAAGCAGTACATCGAGTTC 1088096
Query 117347 GTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACCCG 117406
||||||||| | || ||| ||| || | | || |||| |||||| | |||||||
Sbjct 1088095 GTCGCCGACCGTCTCCTGGTCGCCCTCGGCAACGACAAGGTCTACAAGGCCACCAACCCC 1088036
Query 117407 CTGGACTTTATGAACCTCATCT-CCTTGG 117434
| ||||| ||| | ||||| ||||||
Sbjct 1088035 TTCGACTTCATGGAGAACATCTCCCTTGG 1088007
>seq101
Length=1115905
Score = 143 bits (158), Expect = 3e-29
Identities = 172/231 (74%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|| ||||| || ||||| || || ||||| || || || |||||| | || || || |
Sbjct 939850 AAGATGCAGATCTTCGTCAAGACCCTCACAGGGAAGACGATCACCCTTGAGGTGGAGTCT 939909
Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805
|||||| | | | |||| ||||| || || | ||||| |||||||| ||| ||||
Sbjct 939910 TCCGACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGA 939968
Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865
|||||| || ||||||| || ||||| ||||| || || | |||||||| | ||||||
Sbjct 939969 CCAGCAGCGCCTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTA 940028
Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
|||||||||||||||| |||| || || || || | ||| || | || ||
Sbjct 940029 CAACATCCAGAAGGAGTCCACCCTCCACCTGGTCCTCCGCCTGCGTGGTGG 940079
>seq179
Length=1234945
Score = 132 bits (146), Expect = 5e-26
Identities = 138/181 (76%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758
||||| || || || |||||||| ||||||||| |||| ||||| || | |||| | |
Sbjct 140784 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCATT 140843
Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818
| | ||||| || || | ||||| |||||||||||| |||| ||||| |||||
Sbjct 140844 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGATCAGCAGCGACTG 140903
Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878
|||| ||| ||||| ||||| || || | || || ||| |||||||||||||||||||
Sbjct 140904 ATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGAACTCTCTCCGACTACAACATCCAGAAG 140963
Query 40879 G 40879
|
Sbjct 140964 G 140964
>seq57
Length=3318891
Score = 118 bits (130), Expect = 1e-21
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || ||||| || || |||||||| | || ||||| ||| |
Sbjct 1505196 ATGCAGATCTTTGTCAAGACTCTCACCGGAAAGACCATCACTCTGGAGGTCGAGTCCAGC 1505255
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | | | | | ||| || |||| ||||| ||||| || ||| | ||||||
Sbjct 1505256 GATACCATTGACAATGTGAAGTCCAAGATTCAGGACAAGGAGGGTATTCCCCCCGACCAG 1505315
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| ||||| |||| ||| || || |||||||| |||| |||||| | |||||||||
Sbjct 1505316 CAGCGACTTATCTTCGCTGGTAAGCAGCTGGAAGACGGTCGCACCTTGTCTGACTACAAC 1505375
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899
|| ||||||||| | || || || || |||
Sbjct 1505376 ATTCAGAAGGAGTCGACCCTTCACCTTGTG 1505405
Score = 111 bits (122), Expect = 2e-19
Identities = 146/200 (73%), Gaps = 2/200 (1%)
Strand=Plus/Plus
Query 40700 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGC 40759
|||| || || || || ||||| || |||||| |||| || || | |||||| |
Sbjct 1504750 TCGTCAAGACCCTGACCGGCAAGACTATCACCCTCGAGGTGGAGTCTTCCGACACGATCG 1504809
Query 40760 A-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818
| |||| ||||| || || | ||||| ||||||||||| | || ||||| || ||
Sbjct 1504810 ACAACG-TCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCTCCTGATCAGCAGCGCCTG 1504868
Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878
|||| || || || ||||| || || | || |||||| |||||||||||| ||||||
Sbjct 1504869 ATCTTTGCTGGAAAGCAGCTTGAGGATGGCCGAACCCTCGCCGACTACAACATTCAGAAG 1504928
Query 40879 GAGGCCACGCTGCATCTAGT 40898
||| |||| || ||||| ||
Sbjct 1504929 GAGTCCACCCTTCATCTCGT 1504948
Score = 111 bits (122), Expect = 2e-19
Identities = 152/210 (72%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || ||||| || || ||||||||| | || || ||| | ||
Sbjct 1504968 ATGCAAATCTTCGTCAAGACACTCACTGGAAAGACCATCACCCTTGAGGTGGAATCGTCC 1505027
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | | | |||| | ||| || || | || || || || || || | || ||
Sbjct 1505028 GATACCATCGATAACG-TGAAGTCGAAGATCCAGGATAAGGAAGGTATTCCTCCTGATCA 1505086
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|| ||||| |||| ||| ||||| || || || |||| || || |||| |||||||||
Sbjct 1505087 ACAGCGACTTATCTTCGCCGGCAAGCAACTCGAGGACGGCCGAACTCTCAGCGACTACAA 1505146
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|||||||||||| | || ||||| || ||
Sbjct 1505147 CATCCAGAAGGAATCAACTCTGCACCTTGT 1505176
Score = 107 bits (118), Expect = 2e-18
Identities = 137/186 (74%), Gaps = 2/186 (1%)
Strand=Plus/Plus
Query 40714 ACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAGGA 40772
|||||||| ||||||||| |||| || || || | || | | | | |||| | |||
Sbjct 1504488 ACGGGCAAGACCATCACCCTCGAGGTTGAGTCCTCGGATACCATCGACAACGTT-AAGTC 1504546
Query 40773 AAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAA 40832
|| |||| ||||| ||||||||||| | || ||||| || || |||| || || ||
Sbjct 1504547 GAAGATTCAGGACAAGGAGGGCATCCCTCCTGATCAGCAGCGCCTGATCTTTGCTGGAAA 1504606
Query 40833 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892
||||| || || | |||||||| ||| |||||||||||||||||| |||| || ||
Sbjct 1504607 GCAGCTTGAGGATGGCCGCACCCTTTCCGATTACAACATCCAGAAGGAGTCCACCCTCCA 1504666
Query 40893 TCTAGT 40898
|| ||
Sbjct 1504667 CCTCGT 1504672
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515217351651120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |