Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20] 287 sequences; 48,274,071 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq257 100 6e-16 >seq257 Length=3268735 Score = 100 bits (110), Expect = 6e-16 Identities = 406/634 (64%), Gaps = 17/634 (3%) Strand=Plus/Plus Query 248782 CTGGACGGCGCGATTGACTACGGCAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACG 248841 || ||| ||| |||| ||| | | || || | ||| | | ||||| ||||| || Sbjct 717304 CTTGACTCCGCCATTGTCTATGACCGTGACTTCCAATACCAGTACTTTGGCTTCAAGACT 717363 Query 248842 CTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACATG 248901 || ||| ||| || |||||||| |||||||||||||| || || || || |||||| Sbjct 717364 CTTGAGCGATCCTACCTCCTCAAGATTGATGGCAAGATTGTTGAGCGTCCCCAACACATG 717423 Query 248902 TTGATGCGAGTGGCTGTCGGGATTCACAAGGATG---ACATAGAGAGCGTGCTCGAGACG 248958 | ||||| || |||| || || | || || |||| ||| | || |||||||| Sbjct 717424 ATCATGCGTGTCTCTGTTGGCAT---CTGGGGTGACAACATTGAGCGTGTCCTCGAGACT 717480 Query 248959 TACACCGGAATG-AGTGAACGCTGGATGACACATGCCACACCGACGCTCTTCAACGCCGG 249017 |||| | ||| | | | | | | || |||||| | || || || ||||| || || Sbjct 717481 TACAACCTCATGTCGAGCAAG-TTCTTCACTCATGCCTCCCCCACCCTGTTCAATGCGGG 717539 Query 249018 TACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGACTCTGTCGA 249077 |||| | | ||||| ||| ||||| ||| | | |||| | || ||| | | || Sbjct 717540 TACCCCCCAGCCCCAGCTCTCCTCATGCTTCCTTGTCGACATGAAGGAGGACAGTATTGA 717599 Query 249078 CGGCATTTATGACACGCTTAAACAGAC---GGCGAAGATTTCTAAATTCGCGGGCGGAAT 249134 || || ||||| || || | |||| || | |||||| || | || || || || Sbjct 717600 GGGTATCTATGATACTCTCA---AGACCTGTGCCATGATTTCCAAGATGGCTGGTGGTAT 717656 Query 249135 CGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTACATCAAAGGTACAAATGGGGT 249194 || || ||| | ||||| || | || || |||||| ||||| || || Sbjct 717657 TGGCCTGAACGTGCACCGTATCCGTGCCACTGGCTCTTACATCGCTGGTACCAACGGTAC 717716 Query 249195 CAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCCACCGCCAGGTTCATCAACCA 249254 | | ||| || ||| | ||||| ||| | ||| ||| | | | || | || Sbjct 717717 CTCCAACGGTGTCACCCCCATGCTTCGTGTCTTCAACAACACTGCCCGATACGTCGATCA 717776 Query 249255 GGCCGGGCGC---CGAAAGGGGTCGTTCGCCATGTATTTGGAAGTGTGGCACGCCGATAT 249311 || || | ||| || | || ||||| || | || |||||||| ||| | Sbjct 717777 GGGTGGCAACAAGCGACCTGGTGCCTTTGCCATCTACCTTGAGCCCTGGCACGCAGATGT 717836 Query 249312 ATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGCTCATGAGAGCGCGTGACCT 249371 || |||||||| ||| || |||||| ||||||| ||| | | || || ||||| Sbjct 717837 CTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGGTCCGCGCTCGCGACCT 717896 Query 249372 CTTCTACGGCCTGTGGGTCTCCGACTTGTTCATG 249405 ||| | || ||| || |||| | |||||| Sbjct 717897 GTTCCTGGCTCTCTGGATCCCCGATCTCTTCATG 717930 Score = 91.5 bits (100), Expect = 3e-13 Identities = 121/168 (72%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 254000 CCTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGC 254059 ||| || || | ||| || |||| ||||| || || ||||||||||| |||||||| || Sbjct 937255 CCTCCCCCACCTCCTTCTCTACGGCCCTCCAGGCACCGGCAAGACGTCCACCATCCTCGC 937196 Query 254060 GCTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGC 254119 || || || | | | |||| | |||||| | || ||||||||||| ||||| Sbjct 937195 CCTCGCGCGTCGCATCTATGGCGCTGCAAACATGCGCCAGATGGTGCTCGAGCTCAACGC 937136 Query 254120 TTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTT 254167 || ||||| || || | || || || || || ||||||||||||| Sbjct 937135 CTCGGACGACCGTGGTATTGATGTGGTGCGTGAGCAGATCAAGACTTT 937088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073762451559616