Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20]
287 sequences; 48,274,071 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq257 100 6e-16
>seq257
Length=3268735
Score = 100 bits (110), Expect = 6e-16
Identities = 406/634 (64%), Gaps = 17/634 (3%)
Strand=Plus/Plus
Query 248782 CTGGACGGCGCGATTGACTACGGCAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACG 248841
|| ||| ||| |||| ||| | | || || | ||| | | ||||| ||||| ||
Sbjct 717304 CTTGACTCCGCCATTGTCTATGACCGTGACTTCCAATACCAGTACTTTGGCTTCAAGACT 717363
Query 248842 CTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACATG 248901
|| ||| ||| || |||||||| |||||||||||||| || || || || ||||||
Sbjct 717364 CTTGAGCGATCCTACCTCCTCAAGATTGATGGCAAGATTGTTGAGCGTCCCCAACACATG 717423
Query 248902 TTGATGCGAGTGGCTGTCGGGATTCACAAGGATG---ACATAGAGAGCGTGCTCGAGACG 248958
| ||||| || |||| || || | || || |||| ||| | || ||||||||
Sbjct 717424 ATCATGCGTGTCTCTGTTGGCAT---CTGGGGTGACAACATTGAGCGTGTCCTCGAGACT 717480
Query 248959 TACACCGGAATG-AGTGAACGCTGGATGACACATGCCACACCGACGCTCTTCAACGCCGG 249017
|||| | ||| | | | | | | || |||||| | || || || ||||| || ||
Sbjct 717481 TACAACCTCATGTCGAGCAAG-TTCTTCACTCATGCCTCCCCCACCCTGTTCAATGCGGG 717539
Query 249018 TACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGACTCTGTCGA 249077
|||| | | ||||| ||| ||||| ||| | | |||| | || ||| | | ||
Sbjct 717540 TACCCCCCAGCCCCAGCTCTCCTCATGCTTCCTTGTCGACATGAAGGAGGACAGTATTGA 717599
Query 249078 CGGCATTTATGACACGCTTAAACAGAC---GGCGAAGATTTCTAAATTCGCGGGCGGAAT 249134
|| || ||||| || || | |||| || | |||||| || | || || || ||
Sbjct 717600 GGGTATCTATGATACTCTCA---AGACCTGTGCCATGATTTCCAAGATGGCTGGTGGTAT 717656
Query 249135 CGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTACATCAAAGGTACAAATGGGGT 249194
|| || ||| | ||||| || | || || |||||| ||||| || ||
Sbjct 717657 TGGCCTGAACGTGCACCGTATCCGTGCCACTGGCTCTTACATCGCTGGTACCAACGGTAC 717716
Query 249195 CAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCCACCGCCAGGTTCATCAACCA 249254
| | ||| || ||| | ||||| ||| | ||| ||| | | | || | ||
Sbjct 717717 CTCCAACGGTGTCACCCCCATGCTTCGTGTCTTCAACAACACTGCCCGATACGTCGATCA 717776
Query 249255 GGCCGGGCGC---CGAAAGGGGTCGTTCGCCATGTATTTGGAAGTGTGGCACGCCGATAT 249311
|| || | ||| || | || ||||| || | || |||||||| ||| |
Sbjct 717777 GGGTGGCAACAAGCGACCTGGTGCCTTTGCCATCTACCTTGAGCCCTGGCACGCAGATGT 717836
Query 249312 ATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGCTCATGAGAGCGCGTGACCT 249371
|| |||||||| ||| || |||||| ||||||| ||| | | || || |||||
Sbjct 717837 CTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGGTCCGCGCTCGCGACCT 717896
Query 249372 CTTCTACGGCCTGTGGGTCTCCGACTTGTTCATG 249405
||| | || ||| || |||| | ||||||
Sbjct 717897 GTTCCTGGCTCTCTGGATCCCCGATCTCTTCATG 717930
Score = 91.5 bits (100), Expect = 3e-13
Identities = 121/168 (72%), Gaps = 0/168 (0%)
Strand=Plus/Minus
Query 254000 CCTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGC 254059
||| || || | ||| || |||| ||||| || || ||||||||||| |||||||| ||
Sbjct 937255 CCTCCCCCACCTCCTTCTCTACGGCCCTCCAGGCACCGGCAAGACGTCCACCATCCTCGC 937196
Query 254060 GCTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGC 254119
|| || || | | | |||| | |||||| | || ||||||||||| |||||
Sbjct 937195 CCTCGCGCGTCGCATCTATGGCGCTGCAAACATGCGCCAGATGGTGCTCGAGCTCAACGC 937136
Query 254120 TTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTT 254167
|| ||||| || || | || || || || || |||||||||||||
Sbjct 937135 CTCGGACGACCGTGGTATTGATGTGGTGCGTGAGCAGATCAAGACTTT 937088
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073762451559616
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |