Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20]
287 sequences; 48,274,071 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq257 327 1e-84
seq101 107 2e-18
seq57 84.2 2e-11
>seq257
Length=3268735
Score = 327 bits (362), Expect = 1e-84
Identities = 1206/1881 (64%), Gaps = 32/1881 (2%)
Strand=Plus/Minus
Query 22109 TCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCCGTC 22168
|| || || ||||| |||| | ||||| | | || || || || ||||||||||||
Sbjct 719174 TCGACGGTGAACTGAATGGGGGCAGCGGCAGCCTGCGTTCGCAGGTAGTACATGCCCGTC 719115
Query 22169 TTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGGCAAG 22228
|||||||| | |||||| || ||| || || || | || || | ||
Sbjct 719114 TTCAGACCGAGCTTCCAGCCGGCAAAGTGCATGCTGGTGATCTTGCCCATGGTGGGGTCC 719055
Query 22229 TCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCCATA 22288
| ||||| | ||||| ||||| |||||| || || || ||||| |||||||||||
Sbjct 719054 TTCATGTGGATATTGAGAGACTGGGACTGATCAATGAAGGCACCTCGGTCGGCGGCCATC 718995
Query 22289 TTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTCTAAC 22348
| | | ||| || || ||||| ||||||||||| || | ||| |||
Sbjct 718994 TGGACGACCTGGCGCTGGGAAATCTCCCAAACGGTCTTGTAGAGAGCCTTGACCTCGGCG 718935
Query 22349 GGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAATCGTA 22408
|| || ||| |||||| ||| ||||| | | ||||| || || || | |
Sbjct 718934 GGAATGTTGGGGATGTTCTGGATGGAACCGTTCTCGGCAATGATTCGGTTCTTCATAGAA 718875
Query 22409 TCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTTGAAAC 22468
|| ||||| || ||| || | ||| |||| ||| |||| || || || |||
Sbjct 718874 TCCGACCACAGGCCCATGTCGACGAGATCCTTGAGCAGCCAGGGGTTGACGACCTGGAAC 718815
Query 22469 TCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTCATTG 22528
||||| | | ||| ||||| ||||| |||||||| ||| | || ||||| | ||||||
Sbjct 718814 TCGCCAGCGAGGACACGGCGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCATTG 718755
Query 22529 TTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTTTCTC 22588
|| |||| ||||| | || || || ||||| || || | ||| || ||| |
Sbjct 718754 TTACCCAAGATCTGCGAAGTGCTGGCAGTGGGCATGGGGGCAAGCAGCAGACTGTTGCGA 718695
Query 22589 AAGCCGTGCT--TTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGACGGCG 22646
| ||||||| |||| | | | ||| || ||||||||| || || || |||
Sbjct 718694 ATACCGTGCTCCTTGACCTGCTCCCTGAGAGACTC--CCAGTCCCAGAGGTCAGAGGGCT 718637
Query 22647 TCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCTTCGTACG 22706
|||| || |||||| || | || | | ||| | || || ||| | | | |
Sbjct 718636 TCACGTT---CCACATGTCAAACTGGAGAATGCCCTCAGAGGCAGGAGAGCCCTTGAAGG 718580
Query 22707 TTTCGTACGGACCATATATCGCGGCAAGTTCGCA-GCTCGCCTCCAACGCGCCGTAATAT 22765
| ||| || || | | ||| || | ||| | || | || ||| ||
Sbjct 718579 TAGAGTAGGGGCCCTCCTCCTTGGCCAGCT-GCACGGAAGCGGTAAGGGCAGCGTGGTAG 718521
Query 22766 ATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGCTTTCGTACGGCATACGC 22825
|| ||||||||||| | |||||| | || || || | ||| | ||||| |||
Sbjct 718520 ATGGTCTCGAAGATCTGCTTGTTGAGCTCTCGAGCCTCGGGGGACTCGAAAGGCATGCGC 718461
Query 22826 ATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTTTTCAGA 22885
| | ||| || || || | ||||||||| || | |||||| ||||||| | ||
Sbjct 718460 AGAGCAAGGAAAGCATCGGCAAGACCCTGAACACCGACACCGATGGGTCGGTGTCGCATG 718401
Query 22886 TTCGACACTTTTGCC----TCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTCAA 22941
|| || |||| ||||| | || || ||| ||| || | |||||||
Sbjct 718400 TTG----CTGTTGCGAGCTTCGGGAACGGGGTAGTGGTTCACATCAATGATCCTGTTCAG 718345
Query 22942 GTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAA-ACGCC-CG-- 22997
||| | ||| | | || | | ||||| || | ||| ||
Sbjct 718344 GTTGCGAACGACAGTCTGTGTGACCTCGTGCAGCTTCTGGAAGTCATAGCAGGCCTCGTC 718285
Query 22998 ATTGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTT 23057
|| || | ||| | | ||| | |||||||| ||||| || || ||||| ||
Sbjct 718284 ATAGTTGATGAAAGAGGGA-AGGGCAAGAGAGGCAAGGTTGCAGACAGCAACCTCATCAG 718226
Query 23058 TGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGC 23117
|| |||||| | |||||| || || || ||| | || || |||| ||
Sbjct 718225 GGGCACAGTACTCGATAATTTCAGTGCAAAGGTTGGAGCTGCGAATGGTACCCAGGTTCT 718166
Query 23118 TCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGA 23177
|||||||||| || || ||||| ||||||||| |||||| | || | || ||||||
Sbjct 718165 TCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTACAGCATGAAGGGGTTACCAGTCTCGG 718106
Query 23178 CCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACG-----TA 23232
||| | ||| | ||| || ||| | |||| || | | ||| ||| ||
Sbjct 718105 TCTGAGCCTCAAGGATGGCATACCAGAGCTTCTGGGCCTTCATG-GTCTTACGACCCTTA 718047
Query 23233 CCTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGC 23292
|| ||||||| | ||||| | |||| || || || || ||||||| ||||||||
Sbjct 718046 CCGGCCTTCT----CATACTTCTCATACAGAGCCTCGAACTCCTCACCGTAGCAGTCGGC 717991
Query 23293 CAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCT 23352
|| ||||| | | | || |||||||| |||| || || ||||| || |
Sbjct 717990 GAGACCGGGGCACTCGTTGGGGCACATGAGGGTCCAGTCACCGTTCTTCTCAACACGCTT 717931
Query 23353 CATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTT 23412
||| || ||||| || ||||| ||||| |||||| ||||| ||||| |||||||| ||
Sbjct 717930 CATGAAGAGATCGGGGATCCAGAGAGCCAGGAACAGGTCGCGAGCGCGGACCTCCTCCTT 717871
Query 23413 GCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTA 23472
|||| |||||| || || | || || || || || || ||||| ||||| |||||
Sbjct 717870 GCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTA 717811
Query 23473 AACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTT 23532
| |||||| || || |||| ||| ||||| |||||||||||||| ||||| ||||||||
Sbjct 717810 GATGGCAAAGGCACCAGGTCGCTTGTTGCCACCCTGATCGACGTATCGGGCAGTGTTGTT 717751
Query 23533 GTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGA 23592
| | || | ||||| || || ||||||||| | ||| || || | ||
Sbjct 717750 GAAGACACGAAGCATGGGGGTGACACCGTTGGAGGTACCGTTGGTACCAGCGATGTAAGA 717691
Query 23593 ACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCAT 23652
|| | || || | ||| |||| | || || || || || || || |||||
Sbjct 717690 GCCAGTGGCACGGATACGGTGCACGTTCAGGCCAATACCACCAGCCATCTTGGAAATCAT 717631
Query 23653 CGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAA 23712
|| || || ||||| || ||||| ||||| || |||||||| || | |||| |
Sbjct 717630 GGCACAGGTCTTGAGAGTATCATAGATACCCTCAATACTGTCCTCCTTCATGTCGACAAG 717571
Query 23713 GAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTG 23772
||| || || || | || | | ||| ||| | || |||||| || ||| ||| ||
Sbjct 717570 GAAGCATGAGGAGAGCTGGGGCTGGGGGGTACCCGCATTGAACAGGGTGGGGGAGGCATG 717511
Query 23773 CGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCC 23832
|| ||| | ||||||| || ||||| || |||| | | ||||||| || ||
Sbjct 717510 AGTGAAGAACTTGCTCGACATGAGGTTGTAAGTCTCGAGGACACGCTCAATGTTGTCACC 717451
Query 23833 GTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGTT 23892
|| || | | ||| ||||| ||||||| ||| || | ||| || | ||| |
Sbjct 717450 CCAGATGCCAACAGAGACACGCATGATCATGTGTTGGGGACGCTCAACAATCTTGCCATC 717391
Query 23893 AATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTC 23952
||| |||| || || || || | | || || || ||||| || | || | |||||
Sbjct 717390 AATCTTGAGGAGGTAGGATCGCTCAAGAGTCTTGAAGCCAAAGTACTGGTATTGGAAGTC 717331
Query 23953 ACGATCGTGCACTATGGCCGA 23973
||| || | || ||||| ||
Sbjct 717330 ACGGTCATAGACAATGGCGGA 717310
>seq101
Length=1115905
Score = 107 bits (118), Expect = 2e-18
Identities = 169/242 (70%), Gaps = 4/242 (2%)
Strand=Plus/Plus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| || ||||| ||||| || ||||| || ||||||||| | || || || |
Sbjct 939850 AAGATGCAGATCTTCGTCAAGACCCTCACAGGGAAGACGATCACCCTTGAGGTGGAGTCT 939909
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
||||||| |||| | ||||| | || ||||||||| ||| | || || |||
Sbjct 939910 TCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGAC 939969
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
|||||||| || || || |||||||| ||| | || || || ||||||| ||
Sbjct 939970 CAGCAGCGCCTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTAC 940029
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT----AGAAG 31425
||||| || || || || || || || ||||| || | ||| | || ||| |||||
Sbjct 940030 AACATCCAGAAGGAGTCCACCCTCCACCTGGTCCTCCGCCTGCGTGGTGGTGCCAAGAAG 940089
Query 31426 CG 31427
||
Sbjct 940090 CG 940091
>seq57
Length=3318891
Score = 84.2 bits (92), Expect = 2e-11
Identities = 100/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 31285 GGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGA 31344
||||||||| || | || |||||||||||||| || || |||||||| || ||| ||||
Sbjct 1505288 GGACAAGGAGGGTATTCCCCCCGACCAGCAGCGACTTATCTTCGCTGGTAAGCAGCTGGA 1505347
Query 31345 AGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|||| | || || || || |||||||| || || ||||| ||||| || || ||
Sbjct 1505348 AGACGGTCGCACCTTGTCTGACTACAACATTCAGAAGGAGTCGACCCTTCACCTTGTGCT 1505407
Query 31405 TAGACTGAGGGGCGGT 31420
| || | ||||||
Sbjct 1505408 CCGTCTCCGTGGCGGT 1505423
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445764800813040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |