Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20] 287 sequences; 48,274,071 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq124 118 1e-21 seq257 114 2e-20 >seq124 Length=1203342 Score = 118 bits (130), Expect = 1e-21 Identities = 362/557 (65%), Gaps = 6/557 (1%) Strand=Plus/Plus Query 36158 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 36217 || || || ||| ||| |||||||| || | | || | |||||||| || || || Sbjct 1088253 CAGGCAAAGTCGGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGA 1088312 Query 36218 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 36277 || ||||| || |||||||| || ||||| || ||||| ||||| | ||| ||||| Sbjct 1088313 CCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCACTGAAGAAG 1088372 Query 36278 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA--ACCGGCACT-GTCATGT 36334 || || || || || || ||||| | || | || || | || | || ||| || Sbjct 1088373 ATGCCCTCGACGGCAGCGAAGGCGACGAGACGCTGAGCAAAGGACGAGTCCTTGTCCTGA 1088432 Query 36335 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 36394 ||||| |||||| ||||||||||| | || || || ||||| || || || Sbjct 1088433 ATCCATCGGATAGCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTTG 1088492 Query 36395 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATT 36454 ||||| || || | | | || || | || || ||||| | ||| || | Sbjct 1088493 AAGAGGTATGTTCGCTGAGAAGGCTCCTTGATGTAGGTGTCAATGAGCAGAGAGTAGGTC 1088552 Query 36455 TCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 36514 || || || ||||| || || || || || |||||||| |||| |||||| | ||| Sbjct 1088553 TCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGAGCCTCAGGGATC 1088612 Query 36515 TGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 36574 || || || | ||||| || | | || || || || || |||||| ||| || Sbjct 1088613 TGAACCTCGCCGCTGAATCGCTCAACAAGGTTCTCGTTGACGATGCCGTCAGAGGCAGCG 1088672 Query 36575 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTA---GTTTATTCCAA 36631 || || || | | || || || | | |||| | || | | || ||||| Sbjct 1088673 AAGAAGGCAAGGATGTGGGAGATGAAGAACTGCTCGTCGGAAGTCAGGCGGTTGTTCCAG 1088732 Query 36632 TCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 36691 || | || ||| || || | ||| | || || | ||||| || || ||||| ||||| Sbjct 1088733 TCGTGGAGATCCTTGGACAGATCGATCTCCTCGGCAGTCCAGAAAGAGGCCTCGGCCTTC 1088792 Query 36692 TTATACATATTCCAGAT 36708 || ||||| | |||||| Sbjct 1088793 TTGTACATTTGCCAGAT 1088809 >seq257 Length=3268735 Score = 114 bits (126), Expect = 2e-20 Identities = 439/684 (64%), Gaps = 14/684 (2%) Strand=Plus/Minus Query 66027 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 66086 || ||||| | | ||| || |||| | || || || ||||| |||||||| || ||| Sbjct 717971 GGGCACATGAGGGTCCAGTCACCGTTCTTCTCAACACGCTTCATGAAGAGATCGGGGATC 717912 Query 66087 CAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 66146 || ||||| | || | || | | | ||||| || || ||||| || Sbjct 717911 CAGAGAGCCAGGAACAGGTCGCGAGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGG 717852 Query 66147 TCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 66206 || |||||| | | | ||| ||||| || || | ||| ||||| | | ||||| Sbjct 717851 TCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCAGGT 717792 Query 66207 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 66266 || ||||| || |||||||| | ||||| || ||||| || | || | | ||| || Sbjct 717791 CGCTTGTTGCCACCCTGATCGACGTATCGGGCAGTGTTGTTGAAGACACGAAGCATGGGG 717732 Query 66267 ATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATAT-- 66324 | | ||| ||||| ||||| ||||| || | ||| || ||| | ||||| ||| Sbjct 717731 GTGACACCGTTGGAGGTACCGTTGGTACCAGCGATGTAAGAGCCAGTGGCACGGATACGG 717672 Query 66325 TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG 66384 | | || | | || || || || ||||| || || || | || || || | | Sbjct 717671 TGCACGTTCA--GGCCAATACCACCAGCCATCTTGGAAATCATGGCACAGGTCTTGAGAG 717614 Query 66385 TATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTT 66444 |||||||||| ||||| ||||| || ||| |||||| | || || || || | | Sbjct 717613 TATCATAGATACCCTCAATACTGTCCTCCTTCATGTCGACAAGGAAGCATGAGGAGAGCT 717554 Query 66445 GGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAG 66504 || | | || |||||||| || | ||| || || || || || || | || | Sbjct 717553 GGGGCTGGGGGGTACCCGCATTGAACAGGGTGGGGGAGGCATGAGTGAAGAACTTGCTCG 717494 Query 66505 AAAGTAGATTGTACGTCTC----AATAGCTGAGTCTATATC-CCATTGATGAATTCCTAC 66559 | | || ||||| ||||| | ||| | | | | || || |||| || || Sbjct 717493 ACATGAGGTTGTAAGTCTCGAGGACACGCTCAATGT-TGTCACCCCAGATG----CCAAC 717439 Query 66560 TGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAA 66619 | ||||||||| | |||||| || || | ||||| |||||| | || || | | Sbjct 717438 AGAGACACGCATGATCATGTGTTGGGGACGCTCAACAATCTTGCCATCAATCTTGAGGAG 717379 Query 66620 GTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAAT 66679 ||||||| || | ||| || || ||||| || | |||| ||||| || || || | Sbjct 717378 GTAGGATCGCTCAAGAGTCTTGAAGCCAAAGTACTGGTATTGGAAGTCACGGTCATAGAC 717319 Query 66680 AATAACCGAGTTGAGTTTATCCTT 66703 ||| | |||| || | ||||| Sbjct 717318 AATGGCGGAGTCAAGCTCCTCCTT 717295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658170438805080