Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20]
287 sequences; 48,274,071 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq124 118 1e-21
seq257 114 2e-20
>seq124
Length=1203342
Score = 118 bits (130), Expect = 1e-21
Identities = 362/557 (65%), Gaps = 6/557 (1%)
Strand=Plus/Plus
Query 36158 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 36217
|| || || ||| ||| |||||||| || | | || | |||||||| || || ||
Sbjct 1088253 CAGGCAAAGTCGGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGA 1088312
Query 36218 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 36277
|| ||||| || |||||||| || ||||| || ||||| ||||| | ||| |||||
Sbjct 1088313 CCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCACTGAAGAAG 1088372
Query 36278 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA--ACCGGCACT-GTCATGT 36334
|| || || || || || ||||| | || | || || | || | || ||| ||
Sbjct 1088373 ATGCCCTCGACGGCAGCGAAGGCGACGAGACGCTGAGCAAAGGACGAGTCCTTGTCCTGA 1088432
Query 36335 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 36394
||||| |||||| ||||||||||| | || || || ||||| || || ||
Sbjct 1088433 ATCCATCGGATAGCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTTG 1088492
Query 36395 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATT 36454
||||| || || | | | || || | || || ||||| | ||| || |
Sbjct 1088493 AAGAGGTATGTTCGCTGAGAAGGCTCCTTGATGTAGGTGTCAATGAGCAGAGAGTAGGTC 1088552
Query 36455 TCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 36514
|| || || ||||| || || || || || |||||||| |||| |||||| | |||
Sbjct 1088553 TCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGAGCCTCAGGGATC 1088612
Query 36515 TGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 36574
|| || || | ||||| || | | || || || || || |||||| ||| ||
Sbjct 1088613 TGAACCTCGCCGCTGAATCGCTCAACAAGGTTCTCGTTGACGATGCCGTCAGAGGCAGCG 1088672
Query 36575 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTA---GTTTATTCCAA 36631
|| || || | | || || || | | |||| | || | | || |||||
Sbjct 1088673 AAGAAGGCAAGGATGTGGGAGATGAAGAACTGCTCGTCGGAAGTCAGGCGGTTGTTCCAG 1088732
Query 36632 TCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 36691
|| | || ||| || || | ||| | || || | ||||| || || ||||| |||||
Sbjct 1088733 TCGTGGAGATCCTTGGACAGATCGATCTCCTCGGCAGTCCAGAAAGAGGCCTCGGCCTTC 1088792
Query 36692 TTATACATATTCCAGAT 36708
|| ||||| | ||||||
Sbjct 1088793 TTGTACATTTGCCAGAT 1088809
>seq257
Length=3268735
Score = 114 bits (126), Expect = 2e-20
Identities = 439/684 (64%), Gaps = 14/684 (2%)
Strand=Plus/Minus
Query 66027 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 66086
|| ||||| | | ||| || |||| | || || || ||||| |||||||| || |||
Sbjct 717971 GGGCACATGAGGGTCCAGTCACCGTTCTTCTCAACACGCTTCATGAAGAGATCGGGGATC 717912
Query 66087 CAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 66146
|| ||||| | || | || | | | ||||| || || ||||| ||
Sbjct 717911 CAGAGAGCCAGGAACAGGTCGCGAGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGG 717852
Query 66147 TCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 66206
|| |||||| | | | ||| ||||| || || | ||| ||||| | | |||||
Sbjct 717851 TCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCAGGT 717792
Query 66207 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 66266
|| ||||| || |||||||| | ||||| || ||||| || | || | | ||| ||
Sbjct 717791 CGCTTGTTGCCACCCTGATCGACGTATCGGGCAGTGTTGTTGAAGACACGAAGCATGGGG 717732
Query 66267 ATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATAT-- 66324
| | ||| ||||| ||||| ||||| || | ||| || ||| | ||||| |||
Sbjct 717731 GTGACACCGTTGGAGGTACCGTTGGTACCAGCGATGTAAGAGCCAGTGGCACGGATACGG 717672
Query 66325 TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG 66384
| | || | | || || || || ||||| || || || | || || || | |
Sbjct 717671 TGCACGTTCA--GGCCAATACCACCAGCCATCTTGGAAATCATGGCACAGGTCTTGAGAG 717614
Query 66385 TATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTT 66444
|||||||||| ||||| ||||| || ||| |||||| | || || || || | |
Sbjct 717613 TATCATAGATACCCTCAATACTGTCCTCCTTCATGTCGACAAGGAAGCATGAGGAGAGCT 717554
Query 66445 GGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAG 66504
|| | | || |||||||| || | ||| || || || || || || | || |
Sbjct 717553 GGGGCTGGGGGGTACCCGCATTGAACAGGGTGGGGGAGGCATGAGTGAAGAACTTGCTCG 717494
Query 66505 AAAGTAGATTGTACGTCTC----AATAGCTGAGTCTATATC-CCATTGATGAATTCCTAC 66559
| | || ||||| ||||| | ||| | | | | || || |||| || ||
Sbjct 717493 ACATGAGGTTGTAAGTCTCGAGGACACGCTCAATGT-TGTCACCCCAGATG----CCAAC 717439
Query 66560 TGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAA 66619
| ||||||||| | |||||| || || | ||||| |||||| | || || | |
Sbjct 717438 AGAGACACGCATGATCATGTGTTGGGGACGCTCAACAATCTTGCCATCAATCTTGAGGAG 717379
Query 66620 GTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAAT 66679
||||||| || | ||| || || ||||| || | |||| ||||| || || || |
Sbjct 717378 GTAGGATCGCTCAAGAGTCTTGAAGCCAAAGTACTGGTATTGGAAGTCACGGTCATAGAC 717319
Query 66680 AATAACCGAGTTGAGTTTATCCTT 66703
||| | |||| || | |||||
Sbjct 717318 AATGGCGGAGTCAAGCTCCTCCTT 717295
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658170438805080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |