Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20]
287 sequences; 48,274,071 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq124 136 6e-27
seq257 129 8e-25
>seq124
Length=1203342
Score = 136 bits (150), Expect = 6e-27
Identities = 366/557 (66%), Gaps = 6/557 (1%)
Strand=Plus/Plus
Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019
|| || || ||| ||| |||||||| || | | || || |||||||| || || ||
Sbjct 1088253 CAGGCAAAGTCGGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGA 1088312
Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079
|| ||||| || |||||||| || ||||| || ||||| ||||| | ||| ||||||
Sbjct 1088313 CCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCACTGAAGAAG 1088372
Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATA--ACTGGCGCT-GTCATGT 50136
|| || || || || || ||||| || || | || || | || | || ||| ||
Sbjct 1088373 ATGCCCTCGACGGCAGCGAAGGCGACGAGACGCTGAGCAAAGGACGAGTCCTTGTCCTGA 1088432
Query 50137 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 50196
||||| |||||| ||||||||||| | || || || || || ||||| ||
Sbjct 1088433 ATCCATCGGATAGCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTTG 1088492
Query 50197 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 50256
||||| || || | | | || || | || || || || | ||| || |
Sbjct 1088493 AAGAGGTATGTTCGCTGAGAAGGCTCCTTGATGTAGGTGTCAATGAGCAGAGAGTAGGTC 1088552
Query 50257 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 50316
|| || || ||||| || || ||||| || |||||||| |||| |||||| | |||
Sbjct 1088553 TCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGAGCCTCAGGGATC 1088612
Query 50317 TGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 50376
|| || || | ||||| ||| | | || || || || || |||||| ||| ||
Sbjct 1088613 TGAACCTCGCCGCTGAATCGCTCAACAAGGTTCTCGTTGACGATGCCGTCAGAGGCAGCG 1088672
Query 50377 AAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTA---GTTTATTCCAA 50433
|| || || | | || || || | |||| || || | | || |||||
Sbjct 1088673 AAGAAGGCAAGGATGTGGGAGATGAAGAACTGCTCGTCGGAAGTCAGGCGGTTGTTCCAG 1088732
Query 50434 TCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 50493
|| | || ||| || || | ||| | || || | ||||| || || ||||| |||||
Sbjct 1088733 TCGTGGAGATCCTTGGACAGATCGATCTCCTCGGCAGTCCAGAAAGAGGCCTCGGCCTTC 1088792
Query 50494 TTATACATATTCCAGAT 50510
|| ||||| | ||||||
Sbjct 1088793 TTGTACATTTGCCAGAT 1088809
>seq257
Length=3268735
Score = 129 bits (142), Expect = 8e-25
Identities = 451/699 (65%), Gaps = 14/699 (2%)
Strand=Plus/Minus
Query 79891 CCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATA 79950
|| || || |||| || ||||| | | ||| || || | | || || || |||||
Sbjct 717986 CCGGGGCACTCGTTGGGGCACATGAGGGTCCAGTCACCGTTCTTCTCAACACGCTTCATG 717927
Query 79951 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCT 80010
|||||||| || ||||| ||||| | || || || | | | |||||| || ||
Sbjct 717926 AAGAGATCGGGGATCCAGAGAGCCAGGAACAGGTCGCGAGCGCGGACCTCCTCCTTGCCG 717867
Query 80011 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 80070
||||| || || |||||| | | | ||| | ||||| || || | ||| |||
Sbjct 717866 TGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATG 717807
Query 80071 GCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 80130
|| | | || ||||| ||||| || |||||||| | ||||| || ||||| || |
Sbjct 717806 GCAAAGGCACCAGGTCGCTTGTTGCCACCCTGATCGACGTATCGGGCAGTGTTGTTGAAG 717747
Query 80131 ACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCA 80190
|| | | ||| || | | ||| ||||| ||||| ||||| || | ||| || |||
Sbjct 717746 ACACGAAGCATGGGGGTGACACCGTTGGAGGTACCGTTGGTACCAGCGATGTAAGAGCCA 717687
Query 80191 CTGGCACGAATAT--TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 80248
||||||| ||| | | || | | || || || || ||||| || || || | |
Sbjct 717686 GTGGCACGGATACGGTGCACGTTCA--GGCCAATACCACCAGCCATCTTGGAAATCATGG 717629
Query 80249 CGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAA 80308
| || || | ||||||||||| ||||| || || || || |||||| | || |
Sbjct 717628 CACAGGTCTTGAGAGTATCATAGATACCCTCAATACTGTCCTCCTTCATGTCGACAAGGA 717569
Query 80309 AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 80368
| || || | ||| | | || |||||||| || | ||| || || || || |
Sbjct 717568 AGCATGAGGAGAGCTGGGGCTGGGGGGTACCCGCATTGAACAGGGTGGGGGAGGCATGAG 717509
Query 80369 TAAACCATTTTTCAGACAGTAGATTGTACGTCTC----AATAGCTGATTCTATATC-CCA 80423
| || | || |||| || ||||| ||||| | ||| | | | | || ||
Sbjct 717508 TGAAGAACTTGCTCGACATGAGGTTGTAAGTCTCGAGGACACGCTCAATGT-TGTCACCC 717450
Query 80424 TTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT 80483
|||| || || | ||||||||| | |||||| || || | ||||| ||||||
Sbjct 717449 CAGATG----CCAACAGAGACACGCATGATCATGTGTTGGGGACGCTCAACAATCTTGCC 717394
Query 80484 ATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAA 80543
|| || || | | ||| ||| || | ||| || || ||||| || | |||| ||
Sbjct 717393 ATCAATCTTGAGGAGGTAGGATCGCTCAAGAGTCTTGAAGCCAAAGTACTGGTATTGGAA 717334
Query 80544 GTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTT 80582
||| || || || | ||| | |||| || | |||||
Sbjct 717333 GTCACGGTCATAGACAATGGCGGAGTCAAGCTCCTCCTT 717295
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718266223210680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |