Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20] 287 sequences; 48,274,071 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq124 136 6e-27 seq257 129 8e-25 >seq124 Length=1203342 Score = 136 bits (150), Expect = 6e-27 Identities = 366/557 (66%), Gaps = 6/557 (1%) Strand=Plus/Plus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || || || ||| ||| |||||||| || | | || || |||||||| || || || Sbjct 1088253 CAGGCAAAGTCGGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGA 1088312 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 || ||||| || |||||||| || ||||| || ||||| ||||| | ||| |||||| Sbjct 1088313 CCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCACTGAAGAAG 1088372 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATA--ACTGGCGCT-GTCATGT 50136 || || || || || || ||||| || || | || || | || | || ||| || Sbjct 1088373 ATGCCCTCGACGGCAGCGAAGGCGACGAGACGCTGAGCAAAGGACGAGTCCTTGTCCTGA 1088432 Query 50137 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 50196 ||||| |||||| ||||||||||| | || || || || || ||||| || Sbjct 1088433 ATCCATCGGATAGCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTTG 1088492 Query 50197 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 50256 ||||| || || | | | || || | || || || || | ||| || | Sbjct 1088493 AAGAGGTATGTTCGCTGAGAAGGCTCCTTGATGTAGGTGTCAATGAGCAGAGAGTAGGTC 1088552 Query 50257 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 50316 || || || ||||| || || ||||| || |||||||| |||| |||||| | ||| Sbjct 1088553 TCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGAGCCTCAGGGATC 1088612 Query 50317 TGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 50376 || || || | ||||| ||| | | || || || || || |||||| ||| || Sbjct 1088613 TGAACCTCGCCGCTGAATCGCTCAACAAGGTTCTCGTTGACGATGCCGTCAGAGGCAGCG 1088672 Query 50377 AAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTA---GTTTATTCCAA 50433 || || || | | || || || | |||| || || | | || ||||| Sbjct 1088673 AAGAAGGCAAGGATGTGGGAGATGAAGAACTGCTCGTCGGAAGTCAGGCGGTTGTTCCAG 1088732 Query 50434 TCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 50493 || | || ||| || || | ||| | || || | ||||| || || ||||| ||||| Sbjct 1088733 TCGTGGAGATCCTTGGACAGATCGATCTCCTCGGCAGTCCAGAAAGAGGCCTCGGCCTTC 1088792 Query 50494 TTATACATATTCCAGAT 50510 || ||||| | |||||| Sbjct 1088793 TTGTACATTTGCCAGAT 1088809 >seq257 Length=3268735 Score = 129 bits (142), Expect = 8e-25 Identities = 451/699 (65%), Gaps = 14/699 (2%) Strand=Plus/Minus Query 79891 CCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATA 79950 || || || |||| || ||||| | | ||| || || | | || || || ||||| Sbjct 717986 CCGGGGCACTCGTTGGGGCACATGAGGGTCCAGTCACCGTTCTTCTCAACACGCTTCATG 717927 Query 79951 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCT 80010 |||||||| || ||||| ||||| | || || || | | | |||||| || || Sbjct 717926 AAGAGATCGGGGATCCAGAGAGCCAGGAACAGGTCGCGAGCGCGGACCTCCTCCTTGCCG 717867 Query 80011 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 80070 ||||| || || |||||| | | | ||| | ||||| || || | ||| ||| Sbjct 717866 TGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATG 717807 Query 80071 GCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 80130 || | | || ||||| ||||| || |||||||| | ||||| || ||||| || | Sbjct 717806 GCAAAGGCACCAGGTCGCTTGTTGCCACCCTGATCGACGTATCGGGCAGTGTTGTTGAAG 717747 Query 80131 ACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCA 80190 || | | ||| || | | ||| ||||| ||||| ||||| || | ||| || ||| Sbjct 717746 ACACGAAGCATGGGGGTGACACCGTTGGAGGTACCGTTGGTACCAGCGATGTAAGAGCCA 717687 Query 80191 CTGGCACGAATAT--TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 80248 ||||||| ||| | | || | | || || || || ||||| || || || | | Sbjct 717686 GTGGCACGGATACGGTGCACGTTCA--GGCCAATACCACCAGCCATCTTGGAAATCATGG 717629 Query 80249 CGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAA 80308 | || || | ||||||||||| ||||| || || || || |||||| | || | Sbjct 717628 CACAGGTCTTGAGAGTATCATAGATACCCTCAATACTGTCCTCCTTCATGTCGACAAGGA 717569 Query 80309 AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 80368 | || || | ||| | | || |||||||| || | ||| || || || || | Sbjct 717568 AGCATGAGGAGAGCTGGGGCTGGGGGGTACCCGCATTGAACAGGGTGGGGGAGGCATGAG 717509 Query 80369 TAAACCATTTTTCAGACAGTAGATTGTACGTCTC----AATAGCTGATTCTATATC-CCA 80423 | || | || |||| || ||||| ||||| | ||| | | | | || || Sbjct 717508 TGAAGAACTTGCTCGACATGAGGTTGTAAGTCTCGAGGACACGCTCAATGT-TGTCACCC 717450 Query 80424 TTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT 80483 |||| || || | ||||||||| | |||||| || || | ||||| |||||| Sbjct 717449 CAGATG----CCAACAGAGACACGCATGATCATGTGTTGGGGACGCTCAACAATCTTGCC 717394 Query 80484 ATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAA 80543 || || || | | ||| ||| || | ||| || || ||||| || | |||| || Sbjct 717393 ATCAATCTTGAGGAGGTAGGATCGCTCAAGAGTCTTGAAGCCAAAGTACTGGTATTGGAA 717334 Query 80544 GTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTT 80582 ||| || || || | ||| | |||| || | ||||| Sbjct 717333 GTCACGGTCATAGACAATGGCGGAGTCAAGCTCCTCCTT 717295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718266223210680