Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20] 287 sequences; 48,274,071 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq257 127 3e-24 seq124 118 1e-21 >seq257 Length=3268735 Score = 127 bits (140), Expect = 3e-24 Identities = 615/963 (64%), Gaps = 30/963 (3%) Strand=Plus/Minus Query 71697 GGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCA---TATTGTATAAT 71753 ||||| ||| || || || || || || ||||||| || |||| || | ||||| Sbjct 718263 GGCAAGAGAGGCAAGGTTGCAGACAGCAACCTCATCAGG---GGCACAGTACTCGATAAT 718207 Query 71754 TTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 71813 |||||||||||| || | ||||| || | || | || || ||||| ||| Sbjct 718206 TTCAGTGCAAAGGTTGGAGCTGCGAATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTT 718147 Query 71814 ACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 71873 || |||||| || || || || || ||||||| || |||||| || | || || Sbjct 718146 GCAGTGATCCTTGTACAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGGATGGC 718087 Query 71874 TTTCCAGACGACTC-GAGCCTTTATTATATTCTTGTATCTCTTTTCT--CTT-TCGTATT 71929 | ||||| | || | ||||| || | ||| | ||| | ||| || || | Sbjct 718086 ATACCAGA-GCTTCTGGGCCTTCATGGT---CTTACGACCCTTACCGGCCTTCTCATACT 718031 Query 71930 GTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATT-GTCTAATCCAGGACATTCATTC 71988 ||| | |||||||| || || | ||| | | | | || || || || || Sbjct 718030 TCTCATACAGAGCCTCGAACTCCTCACCGTA-GCAGTCGGCGAGACCGGGGCACTCGTTG 717972 Query 71989 GGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATC 72048 || ||||| | | ||| || || | | | || || ||||| |||||||| || ||| Sbjct 717971 GGGCACATGAGGGTCCAGTCACCGTTCTTCTCAACACGCTTCATGAAGAGATCGGGGATC 717912 Query 72049 CAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGA 72108 || ||||| | || || || | | | |||||| || || ||||| || Sbjct 717911 CAGAGAGCCAGGAACAGGTCGCGAGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGG 717852 Query 72109 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGC 72168 || |||||| | | | ||| | ||||| || || | ||| ||||| | | || || Sbjct 717851 TCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCAGGT 717792 Query 72169 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 72228 || ||||| || |||||||| | ||||| || ||||| || | || | | ||| || Sbjct 717791 CGCTTGTTGCCACCCTGATCGACGTATCGGGCAGTGTTGTTGAAGACACGAAGCATGGGG 717732 Query 72229 ATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATAT-- 72286 | | ||| ||||| | ||| ||||| || | ||| || ||| ||||||| ||| Sbjct 717731 GTGACACCGTTGGAGGTACCGTTGGTACCAGCGATGTAAGAGCCAGTGGCACGGATACGG 717672 Query 72287 TGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG 72346 ||| || | | || || || || ||||| || || || | || || || | | Sbjct 717671 TGCACGTTCA--GGCCAATACCACCAGCCATCTTGGAAATCATGGCACAGGTCTTGAGAG 717614 Query 72347 TATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTT 72406 |||||||||| ||||| ||||| || ||| |||||| | || || || || | | Sbjct 717613 TATCATAGATACCCTCAATACTGTCCTCCTTCATGTCGACAAGGAAGCATGAGGAGAGCT 717554 Query 72407 GGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAG 72466 || | | || |||||||| || | ||| || || || || || || | || | Sbjct 717553 GGGGCTGGGGGGTACCCGCATTGAACAGGGTGGGGGAGGCATGAGTGAAGAACTTGCTCG 717494 Query 72467 ACAGTAGATTGTACGTCTC----AATAGCTGATTCTATATC-CCATTGATGTATTCCTAC 72521 ||| || ||||| ||||| | ||| | | | | || || |||| || || Sbjct 717493 ACATGAGGTTGTAAGTCTCGAGGACACGCTCAATGT-TGTCACCCCAGATG----CCAAC 717439 Query 72522 CGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAA 72581 | ||||||||| | ||| || || || | ||||| |||||| || || || | | Sbjct 717438 AGAGACACGCATGATCATGTGTTGGGGACGCTCAACAATCTTGCCATCAATCTTGAGGAG 717379 Query 72582 GTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAAT 72641 ||||||| || | ||| || || ||||| || | |||| ||||| || || || | Sbjct 717378 GTAGGATCGCTCAAGAGTCTTGAAGCCAAAGTACTGGTATTGGAAGTCACGGTCATAGAC 717319 Query 72642 AAT 72644 ||| Sbjct 717318 AAT 717316 >seq124 Length=1203342 Score = 118 bits (130), Expect = 1e-21 Identities = 362/557 (65%), Gaps = 6/557 (1%) Strand=Plus/Plus Query 42065 CATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGT 42124 || || || ||| ||| ||||||||||| | | || | |||||||| || || || Sbjct 1088253 CAGGCAAAGTCGGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGA 1088312 Query 42125 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAG 42184 || ||||| || |||||||| || ||||| || || || ||||| | ||| |||||| Sbjct 1088313 CCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCACTGAAGAAG 1088372 Query 42185 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA--AC-CGGCACTGTCATGT 42241 || || || || || || ||||| | || | || || | || | | |||| || Sbjct 1088373 ATGCCCTCGACGGCAGCGAAGGCGACGAGACGCTGAGCAAAGGACGAGTCCTTGTCCTGA 1088432 Query 42242 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 42301 ||||| |||||| ||||||||||| | || || || || || ||||| || Sbjct 1088433 ATCCATCGGATAGCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTTG 1088492 Query 42302 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATT 42361 ||||| || || | | | || || | || || || || | ||| || | Sbjct 1088493 AAGAGGTATGTTCGCTGAGAAGGCTCCTTGATGTAGGTGTCAATGAGCAGAGAGTAGGTC 1088552 Query 42362 TCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACC 42421 || || || ||||| || || ||||| || |||||||| |||| ||||| | | | Sbjct 1088553 TCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGAGCCTCAGGGATC 1088612 Query 42422 TGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCA 42481 || || || | ||||| ||| | | || ||||| || || |||||| ||| || Sbjct 1088613 TGAACCTCGCCGCTGAATCGCTCAACAAGGTTCTCGTTGACGATGCCGTCAGAGGCAGCG 1088672 Query 42482 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTA---ATTTATTCCAA 42538 || || || | | || || || | | ||||| | || | || ||||| Sbjct 1088673 AAGAAGGCAAGGATGTGGGAGATGAAGAACTGCTCGTCGGAAGTCAGGCGGTTGTTCCAG 1088732 Query 42539 TCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTT 42598 || | || ||| || || | ||| | || || | ||||| || || || || ||||| Sbjct 1088733 TCGTGGAGATCCTTGGACAGATCGATCTCCTCGGCAGTCCAGAAAGAGGCCTCGGCCTTC 1088792 Query 42599 TTATACATATTCCAGAT 42615 || ||||| | |||||| Sbjct 1088793 TTGTACATTTGCCAGAT 1088809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671136792288120