Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20]
287 sequences; 48,274,071 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq124 250 4e-61
seq257 156 6e-33
>seq124
Length=1203342
Score = 250 bits (276), Expect = 4e-61
Identities = 580/853 (68%), Gaps = 41/853 (5%)
Strand=Plus/Minus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| |||||||||| ||||| ||||||| || ||||| | ||| ||| ||||||||
Sbjct 1088809 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAGGAGATCGATCTG 1088750
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAG-AGTTT---AT 125134
|||||||| || |||| ||| | | || ||||| | || |||| |||| ||
Sbjct 1088749 TCCAAGGATCTCCACGACTGGAACAACCGCCTGACTT---CCGA-CGAGCAGTTCTTCAT 1088694
Query 125135 ATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGA 125193
|| ||||| | |||||||| || | ||| || || ||||||||||| || || |||||
Sbjct 1088693 CTCCCACATCCTTGCCTTCTTCGCTGCCTCTGACGGCATCGTCAACGAGAACCTTGTTGA 1088634
Query 125194 CACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATC 125252
|||||| ||| | || || |||| ||| ||||| ||||| ||||| |||
Sbjct 1088633 G-CGATTCAGCGGCGAGGTTCAGATCCCTGAGGC-TCGATGCTTCTACGGCTTCCAGATC 1088576
Query 125253 ATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGAT 125312
||||| |||||| | ||||| || | |||||| || ||||||| ||||| ||
Sbjct 1088575 ATGATGGAGAACATCCACTCCGAGACCTACTCTCTGCTCATTGACACCTACATCAAGGAG 1088516
Query 125313 CCG---CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAA 125369
|| || || | | || ||||| ||||| || || || | || | || || ||
Sbjct 1088515 CCTTCTCAGCGAACATAC---CTCTTCAACGCCATTGAGACCATCCCCTGCATCCGCAAG 1088459
Query 125370 AAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTG 125429
||||| | |||| || || ||||| | ||| | | || || | || | | ||
Sbjct 1088458 AAGGCCGACTGGGCTATCCGATGGATTCAGGACAAGGACTCGTCCTTTGCTCAGCGTCTC 1088399
Query 125430 GTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGG 125489
|| || ||||| ||||| |||||||||||||| ||| ||||| ||||||| |||
Sbjct 1088398 GTCGCCTTCGCTGCCGTCGAGGGCATCTTCTTCAGTGGTGCCTTTGCCTCCATCTTCTGG 1088339
Query 125490 CTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGAC 125549
||||||||||| || |||||||| || ||||| | |||||| | || ||||| ||
Sbjct 1088338 CTCAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGAT 1088279
Query 125550 GAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGC 125609
||||| || ||| ||||||||| | | || ||| ||| | | | | || ||
Sbjct 1088278 GAGGGTCTTCACACCGACTTTGCC-TGC--CTCCTTC---ACTCT---CACCTCAAGGGC 1088228
Query 125610 AGATCCAGCGATGAAAAGGTCATC---AACATTGTAACCGATGCCGTGAGGATAGAACAA 125666
| | ||| | |||||||| |||| | || |||||||| | || || ||
Sbjct 1088227 CGTGCTAGC---AAGCAGGTCATCCAGGACATCATCACTGATGCCGTCACCATTGAGCAG 1088171
Query 125667 GAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCA-AGCTAATGTG 125725
||||| || || || | || || | | | ||||||||| ||| | || |||
Sbjct 1088170 GAGTTCCTGACTGAGGCTCTCCCCTGTGCCCTCCTCGGCATGAAC-GCAGACCTCATGAA 1088112
Query 125726 CGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC--CG-CAAGAT 125782
||||||| ||||| || || || ||||| ||| || | ||| || |||| |
Sbjct 1088111 GCAGTACATCGAGTTCGTCGCCGACCGTCTCCTGGTCG---CCCTCGGCAACGACAAGGT 1088055
Query 125783 TTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAA 125842
||||| |||| || ||||| || |||||| | ||| || || | || ||||| ||
Sbjct 1088054 CTACAAGGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGTGGCAAGACGAA 1087995
Query 125843 CTTTTTCGAGAAG 125855
||| || ||||||
Sbjct 1087994 CTTCTTTGAGAAG 1087982
>seq257
Length=3268735
Score = 156 bits (172), Expect = 6e-33
Identities = 316/465 (68%), Gaps = 18/465 (4%)
Strand=Plus/Plus
Query 96864 CGATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCT 96923
|||||||| ||||| ||||| || || || || || | ||| ||||| | || ||
Sbjct 717763 CGATACGTCGATCAGGGTGGCAACAAGCGACCTGGTGCCTTTGCCATCTACCTTGAGCCC 717822
Query 96924 TGGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCA 96983
|||||||| || || ||||| || | || ||||||| ||| ||| || ||||
Sbjct 717823 TGGCACGCAGATGTCTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGGTC 717882
Query 96984 CGAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGT---C 97040
|| || | ||| |||| || |||||| | || ||| | ||||||||||| ||
Sbjct 717883 CGCGCTCGCGACCTGTTCCTGGCTCTCTGGATCCCCGATCTCTTCATGAAGCGTGTTGAG 717942
Query 97041 AACGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGC 97100
|| |||||| |||||| ||| ||||||||| || || |||||||| |||| |||
Sbjct 717943 AAGAACGGTG---ACTGGACCCTCATGTGCCCCAACGAGTGCCCCGGTCTCGCCGACTGC 717999
Query 97101 TGGGGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATA-----CG 97155
| || || ||||| ||||| ||| | || | ||| ||||| || ||
Sbjct 718000 TACGGTGAGGAGTTCGAGGCTCTGTATGAGAAGTATG----AGAAGGCCGGTAAGGGTCG 718055
Query 97156 TGAGACGAGTCGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACT 97214
| |||| | || | | |||| || ||| | |||||| | ||||||| ||||||
Sbjct 718056 TAAGACCA--TGAAGGCCCAGAAGCTCTGGTATGCCATCCTTGAGGCTCAGACCGAGACT 718113
Query 97215 GGAACTCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTG 97274
|| | || | ||| || ||||||||| | || ||||| |||||||| || ||
Sbjct 718114 GGTAACCCCTTCATGCTGTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTG 718173
Query 97275 GGCACCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTAC 97319
|| ||||| ||||||| || ||||| |||||| | ||||||
Sbjct 718174 GGTACCATTCGCAGCTCCAACCTTTGCACTGAAATTATCGAGTAC 718218
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741056541450120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |