Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20] 287 sequences; 48,274,071 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq124 250 4e-61 seq257 156 6e-33 >seq124 Length=1203342 Score = 250 bits (276), Expect = 4e-61 Identities = 580/853 (68%), Gaps = 41/853 (5%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| ||||| ||||||| || ||||| | ||| ||| |||||||| Sbjct 1088809 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAGGAGATCGATCTG 1088750 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAG-AGTTT---AT 125134 |||||||| || |||| ||| | | || ||||| | || |||| |||| || Sbjct 1088749 TCCAAGGATCTCCACGACTGGAACAACCGCCTGACTT---CCGA-CGAGCAGTTCTTCAT 1088694 Query 125135 ATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGA 125193 || ||||| | |||||||| || | ||| || || ||||||||||| || || ||||| Sbjct 1088693 CTCCCACATCCTTGCCTTCTTCGCTGCCTCTGACGGCATCGTCAACGAGAACCTTGTTGA 1088634 Query 125194 CACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATC 125252 |||||| ||| | || || |||| ||| ||||| ||||| ||||| ||| Sbjct 1088633 G-CGATTCAGCGGCGAGGTTCAGATCCCTGAGGC-TCGATGCTTCTACGGCTTCCAGATC 1088576 Query 125253 ATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGAT 125312 ||||| |||||| | ||||| || | |||||| || ||||||| ||||| || Sbjct 1088575 ATGATGGAGAACATCCACTCCGAGACCTACTCTCTGCTCATTGACACCTACATCAAGGAG 1088516 Query 125313 CCG---CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAA 125369 || || || | | || ||||| ||||| || || || | || | || || || Sbjct 1088515 CCTTCTCAGCGAACATAC---CTCTTCAACGCCATTGAGACCATCCCCTGCATCCGCAAG 1088459 Query 125370 AAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTG 125429 ||||| | |||| || || ||||| | ||| | | || || | || | | || Sbjct 1088458 AAGGCCGACTGGGCTATCCGATGGATTCAGGACAAGGACTCGTCCTTTGCTCAGCGTCTC 1088399 Query 125430 GTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGG 125489 || || ||||| ||||| |||||||||||||| ||| ||||| ||||||| ||| Sbjct 1088398 GTCGCCTTCGCTGCCGTCGAGGGCATCTTCTTCAGTGGTGCCTTTGCCTCCATCTTCTGG 1088339 Query 125490 CTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGAC 125549 ||||||||||| || |||||||| || ||||| | |||||| | || ||||| || Sbjct 1088338 CTCAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGAT 1088279 Query 125550 GAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGC 125609 ||||| || ||| ||||||||| | | || ||| ||| | | | | || || Sbjct 1088278 GAGGGTCTTCACACCGACTTTGCC-TGC--CTCCTTC---ACTCT---CACCTCAAGGGC 1088228 Query 125610 AGATCCAGCGATGAAAAGGTCATC---AACATTGTAACCGATGCCGTGAGGATAGAACAA 125666 | | ||| | |||||||| |||| | || |||||||| | || || || Sbjct 1088227 CGTGCTAGC---AAGCAGGTCATCCAGGACATCATCACTGATGCCGTCACCATTGAGCAG 1088171 Query 125667 GAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCA-AGCTAATGTG 125725 ||||| || || || | || || | | | ||||||||| ||| | || ||| Sbjct 1088170 GAGTTCCTGACTGAGGCTCTCCCCTGTGCCCTCCTCGGCATGAAC-GCAGACCTCATGAA 1088112 Query 125726 CGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC--CG-CAAGAT 125782 ||||||| ||||| || || || ||||| ||| || | ||| || |||| | Sbjct 1088111 GCAGTACATCGAGTTCGTCGCCGACCGTCTCCTGGTCG---CCCTCGGCAACGACAAGGT 1088055 Query 125783 TTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAA 125842 ||||| |||| || ||||| || |||||| | ||| || || | || ||||| || Sbjct 1088054 CTACAAGGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGTGGCAAGACGAA 1087995 Query 125843 CTTTTTCGAGAAG 125855 ||| || |||||| Sbjct 1087994 CTTCTTTGAGAAG 1087982 >seq257 Length=3268735 Score = 156 bits (172), Expect = 6e-33 Identities = 316/465 (68%), Gaps = 18/465 (4%) Strand=Plus/Plus Query 96864 CGATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCT 96923 |||||||| ||||| ||||| || || || || || | ||| ||||| | || || Sbjct 717763 CGATACGTCGATCAGGGTGGCAACAAGCGACCTGGTGCCTTTGCCATCTACCTTGAGCCC 717822 Query 96924 TGGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCA 96983 |||||||| || || ||||| || | || ||||||| ||| ||| || |||| Sbjct 717823 TGGCACGCAGATGTCTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGGTC 717882 Query 96984 CGAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGT---C 97040 || || | ||| |||| || |||||| | || ||| | ||||||||||| || Sbjct 717883 CGCGCTCGCGACCTGTTCCTGGCTCTCTGGATCCCCGATCTCTTCATGAAGCGTGTTGAG 717942 Query 97041 AACGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGC 97100 || |||||| |||||| ||| ||||||||| || || |||||||| |||| ||| Sbjct 717943 AAGAACGGTG---ACTGGACCCTCATGTGCCCCAACGAGTGCCCCGGTCTCGCCGACTGC 717999 Query 97101 TGGGGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATA-----CG 97155 | || || ||||| ||||| ||| | || | ||| ||||| || || Sbjct 718000 TACGGTGAGGAGTTCGAGGCTCTGTATGAGAAGTATG----AGAAGGCCGGTAAGGGTCG 718055 Query 97156 TGAGACGAGTCGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACT 97214 | |||| | || | | |||| || ||| | |||||| | ||||||| |||||| Sbjct 718056 TAAGACCA--TGAAGGCCCAGAAGCTCTGGTATGCCATCCTTGAGGCTCAGACCGAGACT 718113 Query 97215 GGAACTCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTG 97274 || | || | ||| || ||||||||| | || ||||| |||||||| || || Sbjct 718114 GGTAACCCCTTCATGCTGTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTG 718173 Query 97275 GGCACCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTAC 97319 || ||||| ||||||| || ||||| |||||| | |||||| Sbjct 718174 GGTACCATTCGCAGCTCCAACCTTTGCACTGAAATTATCGAGTAC 718218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741056541450120