Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20] 287 sequences; 48,274,071 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq57 136 9e-27 >seq57 Length=3318891 Score = 136 bits (150), Expect = 9e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | || ||||| ||||| || || ||||| ||||||| ||||| Sbjct 1505180 AAGAACAAGGTGCAGAGTTGATTCCTTCTGGATGTTGTAGTCGCTGAGAGTTCGGCCGTC 1505121 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || ||||| || || || || || || | ||||||||||||||| || ||||| ||||| Sbjct 1505120 CTCGAGTTGCTTGCCGGCGAAGATAAGTCGCTGTTGATCAGGAGGAATACCTTCCTTATC 1505061 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||| ||||| | || || || || | ||||||| | ||| ||||| || || || || Sbjct 1505060 CTGGATCTTCGACTTCACGTTATCGATGGTATCGGACGATTCCACCTCAAGGGTGATGGT 1505001 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| ||||| ||||| || || || || ||||| Sbjct 1505000 CTTTCCAGTGAGTGTCTTGACGAAGATTTGCAT 1504968 Score = 131 bits (144), Expect = 4e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || |||||||| || |||||||| | || | ||||||||| || || || ||| Sbjct 1505392 GTCGACTCCTTCTGAATGTTGTAGTCAGACAAGGTGCGACCGTCTTCCAGCTGCTTACCA 1505333 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | ||| || || || || || || || || ||||||||||| | || Sbjct 1505332 GCGAAGATAAGTCGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGAATCTTGGACTTC 1505273 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | ||||||||| | || ||||| || || || ||||| || || || || Sbjct 1505272 ACATTGTCAATGGTATCGCTGGACTCGACCTCCAGAGTGATGGTCTTTCCGGTGAGAGTC 1505213 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 1505212 TTGACAAAGATCTGCAT 1505196 Score = 109 bits (120), Expect = 1e-18 Identities = 144/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | || || || |||||||| || ||||| | || |||| || || Sbjct 1504951 AGAACGAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTTCGGCCATCC 1504892 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || || || ||||||||||| || || | ||| ||||||||||| || || || || ||| Sbjct 1504891 TCAAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCC 1504832 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 || ||||| | || || || || | || ||| || || ||||| || || |||||| Sbjct 1504831 TGGATCTTCGACTTGACGTTGTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATAGTC 1504772 Query 104528 TTACCAGTAAGTGTTTTTAC 104547 || || || || || || || Sbjct 1504771 TTGCCGGTCAGGGTCTTGAC 1504752 Score = 95.1 bits (104), Expect = 3e-14 Identities = 127/174 (73%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || || || || || || | || || || || || |||||| Sbjct 1504660 GTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCCTCAAGCTGCTTTCCA 1504601 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | ||| ||||||||||| || || || || ||||||||||| | || Sbjct 1504600 GCAAAGATCAGGCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGAATCTTCGACTTA 1504541 Query 104483 ACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGT 104535 || || || | |||||| | ||| || ||||| || || || ||||| || || Sbjct 1504540 ACGTTGTCGATGGTATC-CGAGGACTCAACCTCGAGGGTGATGGTCTTGCCCGT 1504488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151394166092196