Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20] 287 sequences; 48,274,071 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq57 98.7 9e-16 seq101 93.3 4e-14 >seq57 Length=3318891 Score = 98.7 bits (108), Expect = 9e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 94804 GTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTG 94863 ||||| ||| |||||||| || | ||| || ||||| | ||| | ||||| || || Sbjct 1505171 GTGCAGAGTTGATTCCTTCTGGATGTTGTAGTCGCTGAGAGTTCGGCCGTCCTCGAGTTG 1505112 Query 94864 TTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTT 94923 || ||| | ||||| | || || ||||| |||||||||||||| || || | || || Sbjct 1505111 CTTGCCGGCGAAGATAAGTCGCTGTTGATCAGGAGGAATACCTTCCTTATCCTGGATCTT 1505052 Query 94924 TGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGT 94983 | ||| ||| ||| || || | || || |||| |||||||| |||||||| Sbjct 1505051 CGACTTCACGTTATCGATGGTATCGGACGATTCCACCTCAAGGGTGATGGTCTTTCCAGT 1504992 Query 94984 AAGAGTTTTCACAAAGATCTGCAT 95007 || || || || ||||| ||||| Sbjct 1504991 GAGTGTCTTGACGAAGATTTGCAT 1504968 Score = 84.2 bits (92), Expect = 2e-11 Identities = 115/157 (73%), Gaps = 4/157 (3%) Strand=Plus/Minus Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || |||||||| || || | ||||| | || ||||| || || |||||||| || ||| Sbjct 1505350 TCTTCCAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCGGGGGGAATACCCTCCTTG 1505291 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG--TCGACGTCAATCGTGA 94970 || | ||| || | ||| || | | | || || || ||| ||||| || | |||| Sbjct 1505290 TCCTGAATCTTGGACTTCACATTGTCAATGGTATC-GC-TGGACTCGACCTCCAGAGTGA 1505233 Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| ||||| || ||||| || |||||||||||||| Sbjct 1505232 TGGTCTTTCCGGTGAGAGTCTTGACAAAGATCTGCAT 1505196 >seq101 Length=1115905 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||| ||| | || || ||||| || | ||| || ||||||| ||| | |||||| Sbjct 940061 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 940002 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 ||||| || || ||||||| | | ||||| || || ||||| || || ||||| | Sbjct 940001 AGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 939942 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || || | ||||||| | ||| ||||| | || || |||| ||||| || || Sbjct 939941 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTC 939882 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || || || ||||||||||| Sbjct 939881 CCTGTGAGGGTCTTGACGAAGATCTGCAT 939853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448289591755320