Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20]
287 sequences; 48,274,071 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq57 98.7 9e-16
seq101 93.3 4e-14
>seq57
Length=3318891
Score = 98.7 bits (108), Expect = 9e-16
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 94804 GTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTG 94863
||||| ||| |||||||| || | ||| || ||||| | ||| | ||||| || ||
Sbjct 1505171 GTGCAGAGTTGATTCCTTCTGGATGTTGTAGTCGCTGAGAGTTCGGCCGTCCTCGAGTTG 1505112
Query 94864 TTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTT 94923
|| ||| | ||||| | || || ||||| |||||||||||||| || || | || ||
Sbjct 1505111 CTTGCCGGCGAAGATAAGTCGCTGTTGATCAGGAGGAATACCTTCCTTATCCTGGATCTT 1505052
Query 94924 TGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGT 94983
| ||| ||| ||| || || | || || |||| |||||||| ||||||||
Sbjct 1505051 CGACTTCACGTTATCGATGGTATCGGACGATTCCACCTCAAGGGTGATGGTCTTTCCAGT 1504992
Query 94984 AAGAGTTTTCACAAAGATCTGCAT 95007
|| || || || ||||| |||||
Sbjct 1504991 GAGTGTCTTGACGAAGATTTGCAT 1504968
Score = 84.2 bits (92), Expect = 2e-11
Identities = 115/157 (73%), Gaps = 4/157 (3%)
Strand=Plus/Minus
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
|| |||||||| || || | ||||| | || ||||| || || |||||||| || |||
Sbjct 1505350 TCTTCCAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCGGGGGGAATACCCTCCTTG 1505291
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG--TCGACGTCAATCGTGA 94970
|| | ||| || | ||| || | | | || || || ||| ||||| || | ||||
Sbjct 1505290 TCCTGAATCTTGGACTTCACATTGTCAATGGTATC-GC-TGGACTCGACCTCCAGAGTGA 1505233
Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|||| ||||| || ||||| || ||||||||||||||
Sbjct 1505232 TGGTCTTTCCGGTGAGAGTCTTGACAAAGATCTGCAT 1505196
>seq101
Length=1115905
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858
|||| ||| | || || ||||| || | ||| || ||||||| ||| | ||||||
Sbjct 940061 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 940002
Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918
||||| || || ||||||| | | ||||| || || ||||| || || ||||| |
Sbjct 940001 AGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 939942
Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978
|| || | ||||||| | ||| ||||| | || || |||| ||||| || ||
Sbjct 939941 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTC 939882
Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || || || || |||||||||||
Sbjct 939881 CCTGTGAGGGTCTTGACGAAGATCTGCAT 939853
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448289591755320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |