Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20] 287 sequences; 48,274,071 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq124 104 4e-18 seq236 96.9 5e-16 >seq124 Length=1203342 Score = 104 bits (114), Expect = 4e-18 Identities = 85/101 (84%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| || | ||| | | ||||| |||||||| || ||||||||||| ||||| Sbjct 811245 GCCAAGCGTCACCGAAAGATTT-TGCGAGACAACATCCAGGGTATCACCAAGCCCGCTAT 811303 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||| ||||| |||||||||||||| ||||||||| | |||| Sbjct 811304 CCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATTTCTG 811344 Score = 89.7 bits (98), Expect = 8e-14 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595 || |||| ||||||| |||| ||| | |||| ||||||| || || |||| ||| | Sbjct 811406 TGATCTACGAAGAGACCCGTGGTGTCCTCAAGACCTTCCTCGAGGGTGTCATCCGTGACG 811465 Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655 | || ||| ||||||||||| || || ||||| |||||||| | || ||||||| | Sbjct 811466 CCGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACCTCTCTCGACGTCGTCTACG 811525 Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | || || || ||||| | | || ||||| || ||||| Sbjct 811526 CCCTCAAGCGACAGGGCCGCACCCTCTACGGTTTCGGTGGTTAA 811569 >seq236 Length=1221705 Score = 96.9 bits (106), Expect = 5e-16 Identities = 84/102 (82%), Gaps = 2/102 (2%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| ||||| || || | ||| |||||| || |||||||| || ||||||||||| || | Sbjct 1207044 CGCCAAGCGCCACCGAAAGAT-TCTTCGTGACAACATCCAGGGTATCACCAAGCCTGCCA 1207102 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 | || ||||| |||||||| ||||| ||||||||| |||||| Sbjct 1207103 TTCGACGTCTCGCTCGTCGAGGTGGTGTCAAGCGTATCTCTG 1207144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074937593891