Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20]
287 sequences; 48,274,071 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq124 131 2e-25
seq257 120 4e-22
>seq124
Length=1203342
Score = 131 bits (144), Expect = 2e-25
Identities = 365/557 (66%), Gaps = 6/557 (1%)
Strand=Plus/Plus
Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363
|| || || ||| ||| |||||||| || | | || || |||||||| || || ||
Sbjct 1088253 CAGGCAAAGTCGGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGA 1088312
Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423
|| ||||| || |||||||| || ||||| || ||||| || || | ||| ||||||
Sbjct 1088313 CCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCACTGAAGAAG 1088372
Query 33424 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA--ACCGGCGCT-GTCATGT 33480
|| || || || ||||| ||||| | || | || || | || | || ||| ||
Sbjct 1088373 ATGCCCTCGACGGCAGCGAAGGCGACGAGACGCTGAGCAAAGGACGAGTCCTTGTCCTGA 1088432
Query 33481 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33540
||||| |||||| ||||||||||| | || || || || || ||||| ||
Sbjct 1088433 ATCCATCGGATAGCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTTG 1088492
Query 33541 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 33600
||||| || || | | | || || | || || || || | ||| || |
Sbjct 1088493 AAGAGGTATGTTCGCTGAGAAGGCTCCTTGATGTAGGTGTCAATGAGCAGAGAGTAGGTC 1088552
Query 33601 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 33660
|| || || ||||| || || ||||| || |||||||| |||| |||||| | |||
Sbjct 1088553 TCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGAGCCTCAGGGATC 1088612
Query 33661 TGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCA 33720
|| || || | ||||| || | | || || || || || |||||| ||| ||
Sbjct 1088613 TGAACCTCGCCGCTGAATCGCTCAACAAGGTTCTCGTTGACGATGCCGTCAGAGGCAGCG 1088672
Query 33721 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTA---GTTTATTCCAA 33777
|| || || | | || || || | | ||||| | || | | || |||||
Sbjct 1088673 AAGAAGGCAAGGATGTGGGAGATGAAGAACTGCTCGTCGGAAGTCAGGCGGTTGTTCCAG 1088732
Query 33778 TCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 33837
|| | || ||| || || | ||| | || || | ||||| || || ||||| |||||
Sbjct 1088733 TCGTGGAGATCCTTGGACAGATCGATCTCCTCGGCAGTCCAGAAAGAGGCCTCGGCCTTC 1088792
Query 33838 TTATACATGTTCCAGAT 33854
|| ||||| | ||||||
Sbjct 1088793 TTGTACATTTGCCAGAT 1088809
>seq257
Length=3268735
Score = 120 bits (132), Expect = 4e-22
Identities = 440/684 (64%), Gaps = 14/684 (2%)
Strand=Plus/Minus
Query 63183 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 63242
|| ||||| | | ||| || |||| | || || || ||||| |||||||| || |||
Sbjct 717971 GGGCACATGAGGGTCCAGTCACCGTTCTTCTCAACACGCTTCATGAAGAGATCGGGGATC 717912
Query 63243 CAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 63302
|| ||||| | || || || | | | ||||| || || ||||| ||
Sbjct 717911 CAGAGAGCCAGGAACAGGTCGCGAGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGG 717852
Query 63303 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 63362
|| |||||| | | | ||| | ||||| || || | ||| ||||| | | |||||
Sbjct 717851 TCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCAGGT 717792
Query 63363 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 63422
|| ||||| || |||||||| | ||||| || ||||| || | || | | ||| ||
Sbjct 717791 CGCTTGTTGCCACCCTGATCGACGTATCGGGCAGTGTTGTTGAAGACACGAAGCATGGGG 717732
Query 63423 ATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATAT-- 63480
| | |||||| || |||| |||||||| | ||| || ||| ||||||| |||
Sbjct 717731 GTGACACCGTTGGAGGTACCGTTGGTACCAGCGATGTAAGAGCCAGTGGCACGGATACGG 717672
Query 63481 TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG 63540
| | || | | || || || || ||||| || || || | || || || | |
Sbjct 717671 TGCACGTTCA--GGCCAATACCACCAGCCATCTTGGAAATCATGGCACAGGTCTTGAGAG 717614
Query 63541 TGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTT 63600
| |||||||||||||| || || || || |||||| | || || || || | |
Sbjct 717613 TATCATAGATACCCTCAATACTGTCCTCCTTCATGTCGACAAGGAAGCATGAGGAGAGCT 717554
Query 63601 GGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAG 63660
|| | | || |||||||| || | ||| || || || || || || | || |
Sbjct 717553 GGGGCTGGGGGGTACCCGCATTGAACAGGGTGGGGGAGGCATGAGTGAAGAACTTGCTCG 717494
Query 63661 AAAGTAGATTGTACGTCTC----AATAGCTGAGTCTATATC-CCATTGATGAATTCCTAC 63715
| | || ||||| ||||| | ||| | | | | || || |||| || ||
Sbjct 717493 ACATGAGGTTGTAAGTCTCGAGGACACGCTCAATGT-TGTCACCCCAGATG----CCAAC 717439
Query 63716 TGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAA 63775
| ||||||||| | |||||| || || | ||||| |||||| | || || | |
Sbjct 717438 AGAGACACGCATGATCATGTGTTGGGGACGCTCAACAATCTTGCCATCAATCTTGAGGAG 717379
Query 63776 GTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAAT 63835
||||||| || | ||| || || ||||| || | |||| ||||| || || || |
Sbjct 717378 GTAGGATCGCTCAAGAGTCTTGAAGCCAAAGTACTGGTATTGGAAGTCACGGTCATAGAC 717319
Query 63836 AATAACCGAGTTGAGTTTATCCTT 63859
||| | |||| || | |||||
Sbjct 717318 AATGGCGGAGTCAAGCTCCTCCTT 717295
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622944965176920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |