Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20] 287 sequences; 48,274,071 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq33 140 2e-28 seq124 105 4e-18 >seq33 Length=4744 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 4103 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 4044 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 4043 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 4009 >seq124 Length=1203342 Score = 105 bits (116), Expect = 4e-18 Identities = 199/293 (68%), Gaps = 0/293 (0%) Strand=Plus/Plus Query 6195 GACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAAC 6254 ||||| ||||| |||||||| ||| ||| || ||||| | || || ||||||||| Sbjct 1030113 GACGCCTTCTATCGCTACAAGATGGAGCGTCTCCAGACCAAGATTGAAGGCAAGGGAAAC 1030172 Query 6255 GGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCC 6314 ||||| || ||||| | |||||| | ||||| |||||| ||||| | Sbjct 1030173 GGTATCAAGACCGTTGTCGTCAACCTTAGCAGCGTCGCCGCTTCGCTCGCCCGCCCCGGT 1030232 Query 6315 ACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAA 6374 |||| | || | || || | ||| ||||| |||||||| | | || | ||| Sbjct 1030233 GCCTATGTAATCAAGTTCTTTGGCTTCGAGCTTGGTGCTCAGACCAACATCGACCCCAAG 1030292 Query 6375 AACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGAC 6434 |||| || | ||| | |||||| | || || |||||||||| |||||| || || Sbjct 1030293 GACGACCGTTGGATCATCAACGGAGCCCACGACGCTGCCAAGCTTCAGGACCACCTCGAT 1030352 Query 6435 GGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487 ||||| || |||||| || || || | | ||| | ||||| |||||||| Sbjct 1030353 GGCTTCATCAACAAGTTCGTTCTCTGCAAGAAGTGCAAGAACCCTGAGACCGA 1030405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334946028417497