Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20]
287 sequences; 48,274,071 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq257 134 2e-26
seq124 127 3e-24
>seq257
Length=3268735
Score = 134 bits (148), Expect = 2e-26
Identities = 454/702 (65%), Gaps = 14/702 (2%)
Strand=Plus/Minus
Query 63020 AGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 63079
|| || || || || | || ||||| | | ||| || |||| | || || || |||
Sbjct 717989 AGACCGGGGCACTCGTTGGGGCACATGAGGGTCCAGTCACCGTTCTTCTCAACACGCTTC 717930
Query 63080 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTT 63139
|| |||||||| || ||||| ||||| | || || || | | | ||||| ||
Sbjct 717929 ATGAAGAGATCGGGGATCCAGAGAGCCAGGAACAGGTCGCGAGCGCGGACCTCCTCCTTG 717870
Query 63140 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 63199
|| ||||| || || |||||| | | | ||| | ||||| || || | |||
Sbjct 717869 CCGTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAG 717810
Query 63200 ATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 63259
||||| | | ||||| || ||||| || |||||||| | ||||| || ||||| ||
Sbjct 717809 ATGGCAAAGGCACCAGGTCGCTTGTTGCCACCCTGATCGACGTATCGGGCAGTGTTGTTG 717750
Query 63260 TAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTT 63319
| || | | ||| || | | ||| ||||| ||||| ||||| || | ||| ||
Sbjct 717749 AAGACACGAAGCATGGGGGTGACACCGTTGGAGGTACCGTTGGTACCAGCGATGTAAGAG 717690
Query 63320 CCACTGGCACGAATAT--TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 63377
||| ||||||| ||| | | || | | || || || || ||||| || || || |
Sbjct 717689 CCAGTGGCACGGATACGGTGCACGTTCA--GGCCAATACCACCAGCCATCTTGGAAATCA 717632
Query 63378 ATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTA 63437
|| || || | ||||||||||| ||||| ||||| || ||| |||||| | |
Sbjct 717631 TGGCACAGGTCTTGAGAGTATCATAGATACCCTCAATACTGTCCTCCTTCATGTCGACAA 717572
Query 63438 GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 63497
| || || || | ||| | | || |||||||| || | ||| || || || |
Sbjct 717571 GGAAGCATGAGGAGAGCTGGGGCTGGGGGGTACCCGCATTGAACAGGGTGGGGGAGGCAT 717512
Query 63498 GAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTC----AATAGCTGAGTCTATATC- 63552
|||| || | || || | || ||||| ||||| | ||| | | | | ||
Sbjct 717511 GAGTGAAGAACTTGCTCGACATGAGGTTGTAAGTCTCGAGGACACGCTCAATGT-TGTCA 717453
Query 63553 CCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTT 63612
|| |||| || || | ||||||||| | |||||| || || | ||||| |||||
Sbjct 717452 CCCCAGATG----CCAACAGAGACACGCATGATCATGTGTTGGGGACGCTCAACAATCTT 717397
Query 63613 GTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGA 63672
| | || || | | ||||||| || | ||| || || ||||| || | ||||
Sbjct 717396 GCCATCAATCTTGAGGAGGTAGGATCGCTCAAGAGTCTTGAAGCCAAAGTACTGGTATTG 717337
Query 63673 AAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTT 63714
||||| || || || | ||| | |||| || | |||||
Sbjct 717336 GAAGTCACGGTCATAGACAATGGCGGAGTCAAGCTCCTCCTT 717295
>seq124
Length=1203342
Score = 127 bits (140), Expect = 3e-24
Identities = 364/557 (65%), Gaps = 6/557 (1%)
Strand=Plus/Plus
Query 32661 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 32720
|| || || ||| ||| |||||||| || | | || | |||||||| || || ||
Sbjct 1088253 CAGGCAAAGTCGGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGA 1088312
Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 32780
|| ||||| || |||||||| || ||||| || ||||| ||||| | ||| |||||
Sbjct 1088313 CCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCACTGAAGAAG 1088372
Query 32781 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA--ACCGGCGCT-GTCATGT 32837
|| || || || || || ||||| | || | || || | || | || ||| ||
Sbjct 1088373 ATGCCCTCGACGGCAGCGAAGGCGACGAGACGCTGAGCAAAGGACGAGTCCTTGTCCTGA 1088432
Query 32838 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 32897
||||| |||||| ||||||||||| | || || || ||||| || || ||
Sbjct 1088433 ATCCATCGGATAGCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTTG 1088492
Query 32898 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATT 32957
||||| || || | | | || || | || || ||||| | ||| || |
Sbjct 1088493 AAGAGGTATGTTCGCTGAGAAGGCTCCTTGATGTAGGTGTCAATGAGCAGAGAGTAGGTC 1088552
Query 32958 TCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATC 33017
|| || || ||||| || || || || || ||||||||||||| |||||| | |||
Sbjct 1088553 TCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGAGCCTCAGGGATC 1088612
Query 33018 TGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 33077
|| || || | ||||| || | | || || || || || |||||| ||| ||
Sbjct 1088613 TGAACCTCGCCGCTGAATCGCTCAACAAGGTTCTCGTTGACGATGCCGTCAGAGGCAGCG 1088672
Query 33078 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTA---GTTTATTCCAA 33134
|| || || | | || || || | | ||||| | || | | || |||||
Sbjct 1088673 AAGAAGGCAAGGATGTGGGAGATGAAGAACTGCTCGTCGGAAGTCAGGCGGTTGTTCCAG 1088732
Query 33135 TCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 33194
|| | || ||| || || | ||| | || || | ||||| || || ||||| |||||
Sbjct 1088733 TCGTGGAGATCCTTGGACAGATCGATCTCCTCGGCAGTCCAGAAAGAGGCCTCGGCCTTC 1088792
Query 33195 TTATACATATTCCAGAT 33211
|| ||||| | ||||||
Sbjct 1088793 TTGTACATTTGCCAGAT 1088809
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633629726845200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |