Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20] 287 sequences; 48,274,071 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq257 134 2e-26 seq124 127 3e-24 >seq257 Length=3268735 Score = 134 bits (148), Expect = 2e-26 Identities = 454/702 (65%), Gaps = 14/702 (2%) Strand=Plus/Minus Query 63020 AGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 63079 || || || || || | || ||||| | | ||| || |||| | || || || ||| Sbjct 717989 AGACCGGGGCACTCGTTGGGGCACATGAGGGTCCAGTCACCGTTCTTCTCAACACGCTTC 717930 Query 63080 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTT 63139 || |||||||| || ||||| ||||| | || || || | | | ||||| || Sbjct 717929 ATGAAGAGATCGGGGATCCAGAGAGCCAGGAACAGGTCGCGAGCGCGGACCTCCTCCTTG 717870 Query 63140 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 63199 || ||||| || || |||||| | | | ||| | ||||| || || | ||| Sbjct 717869 CCGTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAG 717810 Query 63200 ATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 63259 ||||| | | ||||| || ||||| || |||||||| | ||||| || ||||| || Sbjct 717809 ATGGCAAAGGCACCAGGTCGCTTGTTGCCACCCTGATCGACGTATCGGGCAGTGTTGTTG 717750 Query 63260 TAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTT 63319 | || | | ||| || | | ||| ||||| ||||| ||||| || | ||| || Sbjct 717749 AAGACACGAAGCATGGGGGTGACACCGTTGGAGGTACCGTTGGTACCAGCGATGTAAGAG 717690 Query 63320 CCACTGGCACGAATAT--TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 63377 ||| ||||||| ||| | | || | | || || || || ||||| || || || | Sbjct 717689 CCAGTGGCACGGATACGGTGCACGTTCA--GGCCAATACCACCAGCCATCTTGGAAATCA 717632 Query 63378 ATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTA 63437 || || || | ||||||||||| ||||| ||||| || ||| |||||| | | Sbjct 717631 TGGCACAGGTCTTGAGAGTATCATAGATACCCTCAATACTGTCCTCCTTCATGTCGACAA 717572 Query 63438 GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 63497 | || || || | ||| | | || |||||||| || | ||| || || || | Sbjct 717571 GGAAGCATGAGGAGAGCTGGGGCTGGGGGGTACCCGCATTGAACAGGGTGGGGGAGGCAT 717512 Query 63498 GAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTC----AATAGCTGAGTCTATATC- 63552 |||| || | || || | || ||||| ||||| | ||| | | | | || Sbjct 717511 GAGTGAAGAACTTGCTCGACATGAGGTTGTAAGTCTCGAGGACACGCTCAATGT-TGTCA 717453 Query 63553 CCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTT 63612 || |||| || || | ||||||||| | |||||| || || | ||||| ||||| Sbjct 717452 CCCCAGATG----CCAACAGAGACACGCATGATCATGTGTTGGGGACGCTCAACAATCTT 717397 Query 63613 GTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGA 63672 | | || || | | ||||||| || | ||| || || ||||| || | |||| Sbjct 717396 GCCATCAATCTTGAGGAGGTAGGATCGCTCAAGAGTCTTGAAGCCAAAGTACTGGTATTG 717337 Query 63673 AAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTT 63714 ||||| || || || | ||| | |||| || | ||||| Sbjct 717336 GAAGTCACGGTCATAGACAATGGCGGAGTCAAGCTCCTCCTT 717295 >seq124 Length=1203342 Score = 127 bits (140), Expect = 3e-24 Identities = 364/557 (65%), Gaps = 6/557 (1%) Strand=Plus/Plus Query 32661 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 32720 || || || ||| ||| |||||||| || | | || | |||||||| || || || Sbjct 1088253 CAGGCAAAGTCGGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGA 1088312 Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 32780 || ||||| || |||||||| || ||||| || ||||| ||||| | ||| ||||| Sbjct 1088313 CCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCACTGAAGAAG 1088372 Query 32781 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA--ACCGGCGCT-GTCATGT 32837 || || || || || || ||||| | || | || || | || | || ||| || Sbjct 1088373 ATGCCCTCGACGGCAGCGAAGGCGACGAGACGCTGAGCAAAGGACGAGTCCTTGTCCTGA 1088432 Query 32838 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 32897 ||||| |||||| ||||||||||| | || || || ||||| || || || Sbjct 1088433 ATCCATCGGATAGCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTTG 1088492 Query 32898 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATT 32957 ||||| || || | | | || || | || || ||||| | ||| || | Sbjct 1088493 AAGAGGTATGTTCGCTGAGAAGGCTCCTTGATGTAGGTGTCAATGAGCAGAGAGTAGGTC 1088552 Query 32958 TCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATC 33017 || || || ||||| || || || || || ||||||||||||| |||||| | ||| Sbjct 1088553 TCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGAGCCTCAGGGATC 1088612 Query 33018 TGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 33077 || || || | ||||| || | | || || || || || |||||| ||| || Sbjct 1088613 TGAACCTCGCCGCTGAATCGCTCAACAAGGTTCTCGTTGACGATGCCGTCAGAGGCAGCG 1088672 Query 33078 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTA---GTTTATTCCAA 33134 || || || | | || || || | | ||||| | || | | || ||||| Sbjct 1088673 AAGAAGGCAAGGATGTGGGAGATGAAGAACTGCTCGTCGGAAGTCAGGCGGTTGTTCCAG 1088732 Query 33135 TCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 33194 || | || ||| || || | ||| | || || | ||||| || || ||||| ||||| Sbjct 1088733 TCGTGGAGATCCTTGGACAGATCGATCTCCTCGGCAGTCCAGAAAGAGGCCTCGGCCTTC 1088792 Query 33195 TTATACATATTCCAGAT 33211 || ||||| | |||||| Sbjct 1088793 TTGTACATTTGCCAGAT 1088809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633629726845200