Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20]
287 sequences; 48,274,071 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq124 141 1e-28
>seq124
Length=1203342
Score = 141 bits (156), Expect = 1e-28
Identities = 376/568 (66%), Gaps = 11/568 (2%)
Strand=Plus/Plus
Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150
||| ||||||||||| || | ||| || || || || || | ||| ||| ||| || |
Sbjct 1088252 GCAGGCAAAGTCGGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAG 1088311
Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210
||| || | || || || ||||||||||| || || || ||||| |||| || ||
Sbjct 1088312 ACCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCACTGAAGAA 1088371
Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCT 93270
|| || || ||||| || || || || | ||| | ||||| | | || | ||
Sbjct 1088372 GATGCCCTCGACGGCAGCGAAGGCGACGAGACGCTGAGCAAAGGACGAGTCCTT-GTCCT 1088430
Query 93271 G-ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGT 93329
| |||||| | |||||| ||||| || || || || || | || || || ||||
Sbjct 1088431 GAATCCATCGGATAGCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGT 1088490
Query 93330 TAAATAGGTAATCTCGCTCGTCCGAA-TCTCGT--ATGTATGTATCGATTAACAGAGAAT 93386
| || ||||| |||| | ||| ||| | ||||| || || || | |||||| |
Sbjct 1088491 TGAAGAGGTATGTTCGC---TGAGAAGGCTCCTTGATGTAGGTGTCAATGAGCAGAGAGT 1088547
Query 93387 ACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCG 93446
| | || || |||| |||||||| || ||||| |||||||| |||| ||| || |
Sbjct 1088548 AGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGAGCCTCAG 1088607
Query 93447 TGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATG 93506
|||||| || || |||| ||| || || || || ||||| || || || || |
Sbjct 1088608 GGATCTGAACCTCGCCGCTGAATCGCTCAACAAGGTTCTCGTTGACGATGCCGTCAGAGG 1088667
Query 93507 CTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCTTAT 93563
| || || || || | || || || || | ||| || | | | || |
Sbjct 1088668 CAGCGAAGAAGGCAAGGATGTGGGAGATGAAGAACTGCTCGTCGGAAGTCAGGCGGTTGT 1088727
Query 93564 CCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTG 93623
||| ||| ||||| || || ||||||| || ||| ||||||| || || || || |
Sbjct 1088728 TCCAGTCGTGGAGATCCTTGGACAGATCGATCTCCTCGGCAGTCCAGAAAGAGGCCTCGG 1088787
Query 93624 CTTTTTTGTACATATCCCATATGTCTTG 93651
| || |||||||| | ||| || | |||
Sbjct 1088788 CCTTCTTGTACATTTGCCAGATCTATTG 1088815
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556858802261880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |