Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20]
287 sequences; 48,274,071 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq57 123 2e-23
seq101 114 1e-20
seq179 86.0 5e-12
>seq57
Length=3318891
Score = 123 bits (136), Expect = 2e-23
Identities = 146/198 (74%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || ||| | ||||| || || ||||||| || || || ||| |
Sbjct 1505196 ATGCAGATCTTTGTCAAGACTCTCACCGGAAAGACCATCACTCTGGAGGTCGAGTCCAGC 1505255
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | ||| || | || || ||||| ||||||||||||||||| ||||| ||
Sbjct 1505256 GATACCATTGACAATGTGAAGTCCAAGATTCAGGACAAGGAGGGTATTCCCCCCGACCAG 1505315
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || ||||| || || || || ||| | || || |||||| | || || ||||||
Sbjct 1505316 CAGCGACTTATCTTCGCTGGTAAGCAGCTGGAAGACGGTCGCACCTTGTCTGACTACAAC 1505375
Query 22399 ATTCAAAAAGAATCCACC 22416
||||| || || || |||
Sbjct 1505376 ATTCAGAAGGAGTCGACC 1505393
Score = 102 bits (112), Expect = 7e-17
Identities = 127/174 (73%), Gaps = 0/174 (0%)
Strand=Plus/Plus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
|| || || || |||| || || || || || | |||||| | ||| | | ||
Sbjct 1504488 ACGGGCAAGACCATCACCCTCGAGGTTGAGTCCTCGGATACCATCGACAACGTTAAGTCG 1504547
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| ||||| ||||||||||| || || || ||||| || || || || ||||| || ||
Sbjct 1504548 AAGATTCAGGACAAGGAGGGCATCCCTCCTGATCAGCAGCGCCTGATCTTTGCTGGAAAG 1504607
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416
||| | |||||| ||||||| | |||||||||||||| || || || ||||||
Sbjct 1504608 CAGCTTGAGGATGGCCGCACCCTTTCCGATTACAACATCCAGAAGGAGTCCACC 1504661
Score = 102 bits (112), Expect = 7e-17
Identities = 145/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
||||| || || |||| || || ||||| | |||| || | ||| | ||||
Sbjct 1504764 ACCGGCAAGACTATCACCCTCGAGGTGGAGTCTTCCGACACGATCGACAACGTCAAGTCG 1504823
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| || || ||||||||||| || || || ||||| || || || || ||||| || ||
Sbjct 1504824 AAGATCCAGGACAAGGAGGGCATCCCTCCTGATCAGCAGCGCCTGATCTTTGCTGGAAAG 1504883
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422
||| | |||||| ||| ||| || |||| ||||||||||| || || |||||| | |||
Sbjct 1504884 CAGCTTGAGGATGGCCGAACCCTCGCCGACTACAACATTCAGAAGGAGTCCACCCTTCAT 1504943
Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446
| ||| | || | || || |||
Sbjct 1504944 CTCGTTCTCCGCCTTCGTGGTGGT 1504967
>seq101
Length=1115905
Score = 114 bits (126), Expect = 1e-20
Identities = 146/201 (73%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|||||||| || || || || || | || || || ||| |||| ||||| ||||| |
Sbjct 939850 AAGATGCAGATCTTCGTCAAGACCCTCACAGGGAAGACGATCACCCTTGAGGTGGAGTCT 939909
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
|||| ||| | ||| | |||| || || || ||||||||||| ||||| || ||
Sbjct 939910 TCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGAC 939969
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|| || || || || ||||| ||||| ||| | |||||| ||||||| | ||| |||
Sbjct 939970 CAGCAGCGCCTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTAC 940029
Query 22396 AACATTCAAAAAGAATCCACC 22416
||||| || || || ||||||
Sbjct 940030 AACATCCAGAAGGAGTCCACC 940050
>seq179
Length=1234945
Score = 86.0 bits (94), Expect = 5e-12
Identities = 127/180 (71%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286
||| || || || | || || || || |||| || || || || || | || ||| |
Sbjct 140783 TTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCAT 140842
Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346
||| || |||| || || || ||||||||||| || || || ||||| || || ||
Sbjct 140843 TGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGATCAGCAGCGACT 140902
Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406
|| || || ||||| ||| | |||||| ||| || ||||||| |||||||| || ||
Sbjct 140903 GATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGAACTCTCTCCGACTACAACATCCAGAA 140962
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419726531870155
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |