Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20euwallaceae_20[genbank_20GCA_5F002168265.2_202017-07-20] 287 sequences; 48,274,071 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq124 131 3e-25 seq57 118 2e-21 seq257 104 5e-17 seq190 100 6e-16 seq277 86.0 1e-11 >seq124 Length=1203342 Score = 131 bits (144), Expect = 3e-25 Identities = 384/585 (66%), Gaps = 15/585 (3%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 || ||||| || | |||||| | || ||||| ||||||||||||||||||||| ||| Sbjct 1087986 TCAAAGAAGTTCGTCTTGCCACCAAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTG 1088045 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 || ||||| |||| | ||| || || || | || ||||| || || ||||| | Sbjct 1088046 GCCTTGTAGACCTTGTCGTTGCCGAGGGCGACCAGGAGACGGTCGGCGACGAACTCGATG 1088105 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| ||| || || | ||||||||| | | ||| || | |||||| | | Sbjct 1088106 TACTGCTTCATGAGGTCTGCGTTCATGCCGAGGAGGGCACAGGGGAGAGCCTCAGTCAGG 1088165 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCT---TCACCTG--TGCCAGAG 251797 || |||| || ||| || || || | || ||| | ||||| ||| || Sbjct 1088166 AACTCCTGCTCAATGGTGACGGCATCAGTGATGATGTCCTGGATGACCTGCTTGCTAG-C 1088224 Query 251798 ACAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGT 251857 || || || || | |||| ||||| | |||| | ||| |||||||| | Sbjct 1088225 ACGGC----CCTTGAGGTGAGAGTGAAGGAGGCAGGCAAAGTCGGTGTGAAGACCCTCAT 1088280 Query 251858 CGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCC 251917 | ||| ||||| ||||||||| | ||| |||||||| | ||||| ||| |||||| Sbjct 1088281 CACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCAGGCATGAGACCACGCTTCTTGAGCC 1088340 Query 251918 AGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAA 251977 ||||||| | | ||||| ||| ||| | | |||||||| | | || || | Sbjct 1088341 AGAAGATGGAGGCAAAGGCACCACTGAAGAAGATGCCCTCGACGGCAGCGAAGGCGACGA 1088400 Query 251978 GGCGCTCAGCAAACGACTTGTCCTGCGACAAGAA--CTTCTG--TGCCCATGCTGCCTTC 252033 | |||| |||||| ||| ||||| | | ||| | || | ||||| | |||||| Sbjct 1088401 GACGCTGAGCAAAGGACGAGTCCT-TGTCCTGAATCCATCGGATAGCCCAGTCGGCCTTC 1088459 Query 252034 TTTCCAACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGTTCCGCTCGGCATCGTCC 252093 || | | |||||| || || || || | ||||| | | |||| | | ||| Sbjct 1088460 TTGCGGATGCAGGGGATGGTCTCAATGGCGTTGAAGAGGTATGTTCGCTGAGAAGGCTCC 1088519 Query 252094 TCGATGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATG 252138 | |||| | |||| || |||||||| |||| || |||||| Sbjct 1088520 TTGATGTAGGTGTCAATGAGCAGAGAGTAGGTCTCGGAGTGGATG 1088564 >seq57 Length=3318891 Score = 118 bits (130), Expect = 2e-21 Identities = 203/294 (69%), Gaps = 8/294 (3%) Strand=Plus/Minus Query 279696 GTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTG 279755 || || |||||||| ||||||||||||||||||||||| || | || ||||| || | | Sbjct 2234161 GTCGGCTCTCTGTCTGGTGGTTGGAAGATGAAGCTGGCTCTGGCCCGGGCCATGCTCCAG 2234102 Query 279756 CGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCC 279815 ||||| |||||||| || || || || || |||||||| | || ||||| | || Sbjct 2234101 CGTGCTGATGTCCTTCTCCTGGACGAACCTACCAACCATCTTGATGTTGCCAACATTGCA 2234042 Query 279816 TGGCTAGTGTCCTACCT----AACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCA 279871 ||||| | | |||||| | ||| | | || | |||| || || || || || Sbjct 2234041 TGGCTCGAGAACTACCTCAAGACCCATCCCG----ATATCACTTCTCTGATCGTGTCCCA 2233986 Query 279872 CGACTCTGGCTTCCTAGATGCCGTGTGCTCTGCCATCATTCACTATGAGCAAAATCTGAA 279931 ||||||||| ||||| || ||| | ||| ||| ||||| |||| || ||| Sbjct 2233985 CGACTCTGGTTTCCTTGACAACGTTACCACTGATATCTACCACTACGAGCCCAACAAGAA 2233926 Query 279932 GCTCTCCAAGCACATCGGCAACCTGTCTGCTTTCGTGGCAAAGCGCCCTGAGGC 279985 ||| || ||| || |||||| |||| || || | | ||||| ||||| Sbjct 2233925 GCTGGCCTGCTACAAGGGTAACCTGGCTGCCTTTGTCGAGATCCGCCCCGAGGC 2233872 >seq257 Length=3268735 Score = 104 bits (114), Expect = 5e-17 Identities = 412/639 (64%), Gaps = 11/639 (2%) Strand=Plus/Minus Query 293173 GAGATCTCCCACGATGTCTTGTACACTGCCTTGACATCAGGATGAATGCCAATAACCTTC 293232 || |||||||| |||||||| | |||||||| || | ||||| | ||| Sbjct 718976 GAAATCTCCCAAACGGTCTTGTAGAGAGCCTTGACCTCGGCGGGAATGTTGGGGATGTTC 718917 Query 293233 TGGATAGACCCTCCGTTGGCAATAATCTGGTTCTTCATTGTCTCGGACCA-AGTCCCACG 293291 ||||| || || | |||||| || |||||||||| | || ||||| || |||| | Sbjct 718916 TGGATGGAACCGTTCTCGGCAATGATTCGGTTCTTCATAGAATCCGACCACAGGCCCATG 718857 Query 293292 AGCAATGAGCTCGCGGACAAGGTAAGAGTTGACAACGGGGAACTCACCAGCGAGAGTGCG 293351 | | ||| || || || | | |||||| || ||||||| |||||||| || Sbjct 718856 T-CGACGAGATCCTTGAGCAGCCAGGGGTTGACGACCTGGAACTCGCCAGCGAGGACACG 718798 Query 293352 ACGGCTGTAAATGTTCGAAGTGATGGGTTCGGCTGCCTCAACAGACCCGCAAATCTGAGC 293411 || ||| ||||| || ||| || ||| |||| || | ||||| | Sbjct 718797 GCGCTGGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCATTGTTACCCAAGATCTGCGA 718738 Query 293412 AGTAGATGCGGTAGGCATAAGAGCAGTCGTCAGAGAGTTCCTCACACC---CTTCTTGAC 293468 ||| || || ||||| | ||| | |||| ||| | | ||| || |||||| Sbjct 718737 AGTGCTGGCAGTGGGCATGGGGGCAAGCAGCAGACTGTTGCGAATACCGTGCTCCTTGAC 718678 Query 293469 ACGCGATTCGAGACCCGCCCAGTCC-AGAGCAGTCTGAGGTGTA-ACACCCCAGAGATGA 293526 || |||| | |||||||| |||| ||| |||| | || ||| | | | Sbjct 718677 CTGCTCCCTGAGAGACTCCCAGTCCCAGAG--GTCAGAGGGCTTCACGTTCCACATGTCA 718620 Query 293527 TACTGCATGATACCCTTGCTGGCAGGAGACCCCTCAAAGGTGGGATGGGGGCCATGCTCA 293586 |||| | || |||| ||||||||| |||| ||||| | | |||||| | ||| Sbjct 718619 AACTGGAGAATGCCCTCAGAGGCAGGAGAGCCCTTGAAGGTAGAGTAGGGGCCCTCCTCC 718560 Query 293587 TCAGAGAGCTCGCAAG-ATGCCTCAACAGCAGCAAAGTAAATGTGCTCGAAGATCTCACG 293645 | | |||| ||| | | || || ||||| ||| ||| ||||||||||| Sbjct 718559 TTGGCCAGCT-GCACGGAAGCGGTAAGGGCAGCGTGGTAGATGGTCTCGAAGATCTGCTT 718501 Query 293646 GTTGAGCTTGCGAGCCTGCTCAGAGTCAAACGGCATCTTCAGCTGGAAGAACACATCCTG 293705 |||||||| ||||||| || || || ||||| ||| | ||| |||| Sbjct 718500 GTTGAGCTCTCGAGCCTCGGGGGACTCGAAAGGCATGCGCAGAGCAAGGAAAGCATCGGC 718441 Query 293706 CAGACCCTGTACACCTACACCAACGGGGCGACGACGCTTGTTGCTCGTCTCTGCCTCGGG 293765 |||||||| ||||| ||||| | ||| || | ||| ||||||| | || ||||| Sbjct 718440 AAGACCCTGAACACCGACACCGATGGGTCGGTGTCGCATGTTGCTGTTGCGAGCTTCGGG 718381 Query 293766 AACCGCATATGCCATCACATCAATGCTCCTGTCCAGGTT 293804 ||| | || ||||||||||| |||||| |||||| Sbjct 718380 AACGGGGTAGTGGTTCACATCAATGATCCTGTTCAGGTT 718342 >seq190 Length=2306874 Score = 100 bits (110), Expect = 6e-16 Identities = 163/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 280160 CTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCT 280219 ||| || |||| || || || ||||| ||||| || |||||||| || ||||| ||||| Sbjct 404238 CTCTCGTATTGCCGTTATCGGTCCCAACGGTGCCGGCAAGTCTACTCTGATCAACGTCCT 404179 Query 280220 GACTGGCGAGACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGC 280279 ||||| ||| | |||| | ||| | | |||| ||||| || || || Sbjct 404178 CACTGGTGAGCTCATCCCCACCGCGGGTGAGATCTACCAGCACGAGAACATCCGTATCGC 404119 Query 280280 TTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCA 280339 ||| || |||||||| ||| |||||||| ||||||||||||| |||||| | | Sbjct 404118 CTACATCAAGCAGCACGCCTTCGCTCACATCGATAACCACCTGGACAAGACTCCCTCCGA 404059 Query 280340 ATACATTCAGTGGCGCTATGCA-AGTGGGCAGGATCTGGAGTCGGTGGATCG 280390 ||||| |||||||| | | || | ||| |||||| ||| | |||| || Sbjct 404058 GTACATCCAGTGGCGAT-TCCAGACTGGTGAGGATCGTGAGACCATGGACCG 404008 Score = 100 bits (110), Expect = 6e-16 Identities = 157/222 (71%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 ||||||||||| || ||||| ||||| || || || |||| |||||||| || ||| Sbjct 405053 GGTGAGGATCTTTGCAACTGTACCTTCTCTCTTGCCTACGGTGCCAAGATTCTTCTCAAC 404994 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 || | |||| | |||||||||| | || || ||||| ||||||||| || | Sbjct 404993 CAGACTCACCTCCGCCTCAAGCGTGGTCAGCGCTACGGTCTTTGCGGTCCCAACGGTTCC 404934 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 || ||| |||||| ||||| ||||| |||| ||| | | ||| ||||| | ||| Sbjct 404933 GGAAAGTCCACTCTCATGCGTGCCATCAACAACGAGCAGGTCG-AGGGTTTCCCCAAGCA 404875 Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565 ||||| | ||| || | || ||||||||| | ||||| Sbjct 404874 GAGCGAGGTCAAGACTGTCTTCGTCGAGCACGACCTGGACTC 404833 Score = 87.8 bits (96), Expect = 4e-12 Identities = 112/152 (74%), Gaps = 2/152 (1%) Strand=Plus/Minus Query 280672 CCAAGCTGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAG 280731 |||| | ||||| ||| | ||| || ||||||||||||| || ||||| ||||| | Sbjct 403681 CCAACTTCGGTCTCGACGCTGAGCTTGTCTCTCACTCTCGCATGCGTGGTCTGTCTGGTG 403622 Query 280732 GCCAGAAGGTCAAACTTGTCATCGGAGC-AGCTCTGTGGCAACACCCTCACGTGATCGTT 280790 | ||| ||||| |||| ||| || ||||| ||||| | ||||| | ||||| Sbjct 403621 GTCAGCGTGTCAAGACTGTCCTCGCCGCTTGCTCT-TGGCAGCGACCTCATCTTATCGTC 403563 Query 280791 CTCGACGAGCCTACCAACTATCTGGACCGCGA 280822 || |||||||| ||||||||||| || || || Sbjct 403562 CTTGACGAGCCCACCAACTATCTCGATCGTGA 403531 >seq277 Length=3871947 Score = 86.0 bits (94), Expect = 1e-11 Identities = 220/335 (66%), Gaps = 0/335 (0%) Strand=Plus/Minus Query 218518 GACTTCATCGACAAGGAGCTCATTCTTTTCTCGCGGTATGATGTGGAGCGTTCTATTCCC 218577 ||||| ||| ||| || ||||| |||||| | |||| ||| || ||||| Sbjct 2364726 GACTTTATCAACAGAGAACTCATCCTTTTCAGCATGGCTGATAACATGCGATCGATTCCT 2364667 Query 218578 AGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAAGCGG 218637 || |||||||| ||||||| ||||| ||| | ||| || |||||| | Sbjct 2364666 TCGGTCCTGGATGGCTTCAAGCCTGGTCAGCGCAAGGTGATCTACGCTTGCTTCAAGAGA 2364607 Query 218638 AACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGGC 218697 |||||||| | || | ||||||| | || |||||||||| || ||| | | Sbjct 2364606 AACCTGGTCAAGGACAAGAAGGTCGTGGAATTGGCTGGTTATGTGTCTGAACAGACGGCA 2364547 Query 218698 TACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTATGTG 218757 ||||| |||||||||||| ||| ||| | || | ||| | || ||| ||| |||| Sbjct 2364546 TACCACCACGGTGAGCAGTCTCTCCAGCAGACTATCATCGGCCTAGCCCAGAACTTTGTG 2364487 Query 218758 GGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGTCTATTGGGT 218817 || |||||||| |||| ||| || | || | || |||||||| || || Sbjct 2364486 GGATCGAACAACATCAACTGCCTGGAACCAAGTGGAAACTTCGGTTCTCGACTCGCCGGC 2364427 Query 218818 GGAAAGGATAGTGCTTCTGCCAGGTATATCTTTAC 218852 || |||| |||| | || | |||| |||||| Sbjct 2364426 GGTTCGGATGCTGCTAGTCCCCGTTATACCTTTAC 2364392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027833020451367